RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W APT2P36973 181 aa2.38□□□□□ -2.03
CFT2YLR115W CRP1P38845 465 aaKnown RBP2.38□□□□□ -2.03
CFT2YLR115W BDH2P39713 417 aa2.38□□□□□ -2.03
CFT2YLR115W SSB2P40150 613 aaKnown RBP2.38□□□□□ -2.03
CFT2YLR115W YIL166CP40445 542 aa2.38□□□□□ -2.03
CFT2YLR115W ATG4P53867 494 aa2.38□□□□□ -2.03
CFT2YLR115W COG8Q04632 607 aa2.38□□□□□ -2.03
CFT2YLR115W ZRT2Q12436 422 aa2.38□□□□□ -2.03
CFT2YLR115W ECM3Q99252 613 aa2.38□□□□□ -2.03
CFT2YLR115W ESP1Q03018 1630 aa2.37□□□□□ -2.03
CFT2YLR115W CDC43P18898 376 aa2.37□□□□□ -2.03
CFT2YLR115W HCA4P20448 770 aaKnown RBP2.37□□□□□ -2.03
CFT2YLR115W PEX2P32800 271 aa2.37□□□□□ -2.03
CFT2YLR115W BCS1P32839 456 aa2.37□□□□□ -2.03
CFT2YLR115W PPZ2P33329 710 aa2.37□□□□□ -2.03
CFT2YLR115W GRX7P38068 203 aa2.37□□□□□ -2.03
CFT2YLR115W RPT2P40327 437 aaKnown RBP2.37□□□□□ -2.03
CFT2YLR115W RSC8P43609 557 aaKnown RBP2.37□□□□□ -2.03
CFT2YLR115W SET2P46995 733 aaKnown RBP2.37□□□□□ -2.03
CFT2YLR115W CTR1P49573 406 aa2.37□□□□□ -2.03
CFT2YLR115W HIF1Q12373 385 aa2.37□□□□□ -2.03
CFT2YLR115W YPR117WQ06116 2489 aa2.37□□□□□ -2.03
CFT2YLR115W YRF1-1P0CX20 1796 aa2.37□□□□□ -2.03
CFT2YLR115W YRF1-5P0CX21 1796 aa2.37□□□□□ -2.03
CFT2YLR115W YRF1-8P0CX22 1796 aa2.37□□□□□ -2.03
CFT2YLR115W MSS1P32559 526 aaPredicted RBP2.37□□□□□ -2.03
CFT2YLR115W GLG1P36143 616 aa2.37□□□□□ -2.03
CFT2YLR115W BIT2P38346 545 aa2.37□□□□□ -2.03
CFT2YLR115W TPM2P40414 161 aa2.37□□□□□ -2.03
CFT2YLR115W USV1Q12132 391 aa2.37□□□□□ -2.03
CFT2YLR115W YGR161W-CQ3E744 92 aa2.37□□□□□ -2.03
CFT2YLR115W TUB1P09733 447 aaKnown RBP2.36□□□□□ -2.03
CFT2YLR115W DMC1P25453 334 aa2.36□□□□□ -2.03
CFT2YLR115W ERP2P39704 215 aa2.36□□□□□ -2.03
CFT2YLR115W NOC2P39744 710 aaKnown RBP2.36□□□□□ -2.03
CFT2YLR115W ARG2P40360 574 aa2.36□□□□□ -2.03
CFT2YLR115W MET13P53128 600 aa2.36□□□□□ -2.03
CFT2YLR115W VPS15P22219 1454 aa2.36□□□□□ -2.03
CFT2YLR115W TY1B-BRQ12193 1756 aa2.36□□□□□ -2.03
CFT2YLR115W TY1B-GR3Q12316 1755 aa2.36□□□□□ -2.03
CFT2YLR115W TY1B-ORQ92393 1755 aa2.36□□□□□ -2.03
CFT2YLR115W KAR1P11927 433 aa2.36□□□□□ -2.03
CFT2YLR115W DPB3P27344 201 aa2.36□□□□□ -2.03
CFT2YLR115W YEL020CP39994 560 aa2.36□□□□□ -2.03
CFT2YLR115W MGS1P40151 587 aa2.36□□□□□ -2.03
CFT2YLR115W IES1P43579 692 aa2.36□□□□□ -2.03
CFT2YLR115W IMO32P53219 342 aa2.36□□□□□ -2.03
CFT2YLR115W ECM16Q04217 1267 aaKnown RBP2.36□□□□□ -2.03
CFT2YLR115W TMA64Q04600 565 aaKnown RBP2.36□□□□□ -2.03
CFT2YLR115W COQ11Q05892 277 aa2.36□□□□□ -2.03
CFT2YLR115W ILV6P25605 309 aaKnown RBP2.35□□□□□ -2.03
CFT2YLR115W FUB1P25659 250 aa2.35□□□□□ -2.03
CFT2YLR115W MFT1P33441 392 aaKnown RBP2.35□□□□□ -2.03
CFT2YLR115W APN2P38207 520 aa2.35□□□□□ -2.03
CFT2YLR115W YHR202WP38887 602 aa2.35□□□□□ -2.03
CFT2YLR115W BEM4P39011 633 aa2.35□□□□□ -2.03
CFT2YLR115W RPS0BP46654 252 aaKnown RBP2.35□□□□□ -2.03
CFT2YLR115W YNL193WP53870 558 aa2.35□□□□□ -2.03
CFT2YLR115W RCR2Q03446 210 aaKnown RBP2.35□□□□□ -2.03
CFT2YLR115W VMS1Q04311 632 aaKnown RBP2.35□□□□□ -2.03
CFT2YLR115W VPS36Q06696 566 aa2.35□□□□□ -2.03
CFT2YLR115W YOL057WQ08225 711 aa2.35□□□□□ -2.03
CFT2YLR115W TOA1P32773 286 aa2.35□□□□□ -2.03
CFT2YLR115W YHR097CP38809 366 aaKnown RBP2.35□□□□□ -2.03
CFT2YLR115W DOT6P40059 670 aaKnown RBP2.35□□□□□ -2.03
CFT2YLR115W YFR016CP43597 1233 aaKnown RBP2.35□□□□□ -2.03
CFT2YLR115W TFB2Q02939 513 aa2.35□□□□□ -2.03
CFT2YLR115W CEF1Q03654 590 aaPredicted RBP2.35□□□□□ -2.03
CFT2YLR115W PAN1P32521 1480 aa2.35□□□□□ -2.03
CFT2YLR115W RPL8AP17076 256 aaKnown RBP2.34□□□□□ -2.03
CFT2YLR115W IME1P21190 360 aa2.34□□□□□ -2.03
CFT2YLR115W PRP28P23394 588 aa2.34□□□□□ -2.03
CFT2YLR115W FEN2P25621 512 aaKnown RBP2.34□□□□□ -2.03
CFT2YLR115W KHA1P40309 873 aa2.34□□□□□ -2.03
CFT2YLR115W RFX1P48743 811 aa2.34□□□□□ -2.03
CFT2YLR115W YGL081WP53156 320 aa2.34□□□□□ -2.03
CFT2YLR115W YGR151CP53287 111 aa2.34□□□□□ -2.03
CFT2YLR115W ALG12P53730 551 aa2.34□□□□□ -2.03
CFT2YLR115W YDL121CQ07541 149 aa2.34□□□□□ -2.03
CFT2YLR115W ISA1Q07821 250 aaPredicted RBP2.34□□□□□ -2.03
CFT2YLR115W YNL162W-AQ3E7A8 72 aa2.34□□□□□ -2.03
CFT2YLR115W TRM732Q03496 1420 aa2.34□□□□□ -2.03
CFT2YLR115W GMH1P36125 273 aa2.34□□□□□ -2.04
CFT2YLR115W PAC2P39937 518 aa2.34□□□□□ -2.04
CFT2YLR115W MIT1P40002 666 aa2.34□□□□□ -2.04
CFT2YLR115W BIT61P47041 543 aa2.34□□□□□ -2.04
CFT2YLR115W COX18P53239 316 aa2.34□□□□□ -2.04
CFT2YLR115W CHS5Q12114 671 aaKnown RBP2.34□□□□□ -2.04
CFT2YLR115W CLF1Q12309 687 aaPredicted RBP2.34□□□□□ -2.04
CFT2YLR115W RPN13O13563 156 aa2.33□□□□□ -2.04
CFT2YLR115W IMG2P25642 146 aaPredicted RBP2.33□□□□□ -2.04
CFT2YLR115W BLI1P35727 113 aa2.33□□□□□ -2.04
CFT2YLR115W YMC2P38087 329 aa2.33□□□□□ -2.04
CFT2YLR115W VPS27P40343 622 aaKnown RBP2.33□□□□□ -2.04
CFT2YLR115W MPS3P47069 682 aa2.33□□□□□ -2.04
CFT2YLR115W APM1Q00776 475 aaPredicted RBP2.33□□□□□ -2.04
CFT2YLR115W ENT2Q05785 613 aa2.33□□□□□ -2.04
CFT2YLR115W DIA2Q08496 732 aaPredicted RBP2.33□□□□□ -2.04
CFT2YLR115W POM34Q12445 299 aa2.33□□□□□ -2.04
CFT2YLR115W CTP1P38152 299 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms