RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W FBP1P09201 348 aa7.82□□□□□ -1.16
SNF7YLR025W VMA2P16140 517 aaKnown RBP7.82□□□□□ -1.16
SNF7YLR025W GBP2P25555 427 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16 RIP-Chip
SNF7YLR025W HEM3P28789 327 aa7.82□□□□□ -1.16
SNF7YLR025W NAM7P30771 971 aaKnown RBP7.82□□□□□ -1.16
SNF7YLR025W PPX1P38698 397 aa7.82□□□□□ -1.16
SNF7YLR025W LCP5P40079 357 aaPredicted RBP7.82□□□□□ -1.16
SNF7YLR025W HSH155P49955 971 aaKnown RBP7.82□□□□□ -1.16
SNF7YLR025W ARK1P53974 638 aa7.82□□□□□ -1.16
SNF7YLR025W YMR102CQ03177 834 aa7.82□□□□□ -1.16
SNF7YLR025W RGA2Q06407 1009 aa7.82□□□□□ -1.16
SNF7YLR025W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
SNF7YLR025W SLX4Q12098 748 aa7.82□□□□□ -1.16
SNF7YLR025W HIF1Q12373 385 aa7.82□□□□□ -1.16
SNF7YLR025W CSR2Q12734 1121 aa7.82□□□□□ -1.16
SNF7YLR025W FRT1Q99332 602 aa7.82□□□□□ -1.16
SNF7YLR025W POL3P15436 1097 aa7.81□□□□□ -1.16
SNF7YLR025W PRE10P21242 288 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
SNF7YLR025W COT1P32798 439 aa7.81□□□□□ -1.16
SNF7YLR025W TGL1P34163 548 aa7.81□□□□□ -1.16
SNF7YLR025W APM2P38700 605 aa7.81□□□□□ -1.16
SNF7YLR025W YTA12P40341 825 aa7.81□□□□□ -1.16
SNF7YLR025W NTA1P40354 457 aa7.81□□□□□ -1.16
SNF7YLR025W SCD6P45978 349 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16 RIP-Chip
SNF7YLR025W YJR039WP47107 1121 aa7.81□□□□□ -1.16
SNF7YLR025W BRO1P48582 844 aa7.81□□□□□ -1.16
SNF7YLR025W YGL039WP53183 348 aaKnown RBP7.81□□□□□ -1.16
SNF7YLR025W PTA1Q01329 785 aaPredicted RBP7.81□□□□□ -1.16
SNF7YLR025W DUS3Q06053 668 aaKnown RBP7.81□□□□□ -1.16
SNF7YLR025W UBX5Q06682 500 aa7.81□□□□□ -1.16
SNF7YLR025W ARG4P04076 463 aaPredicted RBP7.8□□□□□ -1.16
SNF7YLR025W UTR4P32626 227 aa7.8□□□□□ -1.16
SNF7YLR025W CCL1P37366 393 aa7.8□□□□□ -1.16
SNF7YLR025W MRX3P38172 270 aa7.8□□□□□ -1.16
SNF7YLR025W NCL1P38205 684 aaKnown RBP7.8□□□□□ -1.16
SNF7YLR025W ERC1P38767 581 aa7.8□□□□□ -1.16
SNF7YLR025W YGR111WP53265 400 aa7.8□□□□□ -1.16
SNF7YLR025W RPA49Q01080 415 aaPredicted RBP7.8□□□□□ -1.16
SNF7YLR025W ATG16Q03818 150 aa7.8□□□□□ -1.16
SNF7YLR025W ISA1Q07821 250 aaPredicted RBP7.8□□□□□ -1.16
SNF7YLR025W SDH5Q08230 162 aa7.8□□□□□ -1.16
SNF7YLR025W YDR461C-AQ2V2P7 80 aa7.8□□□□□ -1.16
SNF7YLR025W ADH4P10127 382 aa7.79□□□□□ -1.16
SNF7YLR025W SWI3P32591 825 aa7.79□□□□□ -1.16
SNF7YLR025W SHP1P34223 423 aa7.79□□□□□ -1.16
SNF7YLR025W OAF3P36023 863 aa7.79□□□□□ -1.16
SNF7YLR025W TVP38P36164 337 aa7.79□□□□□ -1.16
SNF7YLR025W REG2P38232 338 aa7.79□□□□□ -1.16
SNF7YLR025W BSD2P38356 321 aa7.79□□□□□ -1.16
SNF7YLR025W RAD55P38953 406 aa7.79□□□□□ -1.16
SNF7YLR025W EAF5P39995 279 aa7.79□□□□□ -1.16
SNF7YLR025W SAP185P40856 1058 aa7.79□□□□□ -1.16
SNF7YLR025W YNL320WP42840 284 aa7.79□□□□□ -1.16
SNF7YLR025W RGD2P43556 714 aa7.79□□□□□ -1.16
SNF7YLR025W SHE10P53075 577 aa7.79□□□□□ -1.16
SNF7YLR025W TAM41P53230 385 aa7.79□□□□□ -1.16
SNF7YLR025W DRN1P53255 507 aaKnown RBP7.79□□□□□ -1.16
SNF7YLR025W MDR1P53258 950 aa7.79□□□□□ -1.16
SNF7YLR025W RTT102P53330 157 aa7.79□□□□□ -1.16
SNF7YLR025W IWR1Q07532 353 aaPredicted RBP7.79□□□□□ -1.16
SNF7YLR025W YDL176WQ12027 708 aa7.79□□□□□ -1.16
SNF7YLR025W FPS1P23900 669 aa7.78□□□□□ -1.16
SNF7YLR025W NAB2P32505 525 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
SNF7YLR025W YBL055CP34220 418 aaPredicted RBP7.78□□□□□ -1.16
SNF7YLR025W GPB2P39717 880 aa7.78□□□□□ -1.16
SNF7YLR025W NPP2P39997 493 aa7.78□□□□□ -1.16
SNF7YLR025W FTR1P40088 404 aa7.78□□□□□ -1.16
SNF7YLR025W SBE2P42223 864 aaKnown RBP7.78□□□□□ -1.16
SNF7YLR025W AVT1P47082 602 aa7.78□□□□□ -1.16
SNF7YLR025W INP52P50942 1183 aa7.78□□□□□ -1.16
SNF7YLR025W YNL011CP53980 444 aa7.78□□□□□ -1.16
SNF7YLR025W MTG1Q03151 367 aaPredicted RBP7.78□□□□□ -1.16
SNF7YLR025W YMR187CQ03236 431 aa7.78□□□□□ -1.16
SNF7YLR025W SLD5Q03406 294 aa7.78□□□□□ -1.16
SNF7YLR025W GPI13Q07830 1017 aa7.78□□□□□ -1.16
SNF7YLR025W YPL225WQ08971 146 aaKnown RBP7.78□□□□□ -1.16
SNF7YLR025W YLL058WQ12198 575 aa7.78□□□□□ -1.16
SNF7YLR025W MNL2Q12205 849 aa7.78□□□□□ -1.16
SNF7YLR025W PMS1P14242 873 aa7.77□□□□□ -1.17
SNF7YLR025W PRP9P19736 530 aaKnown RBP7.77□□□□□ -1.17
SNF7YLR025W DAL2P25335 343 aa7.77□□□□□ -1.17
SNF7YLR025W CDC10P25342 322 aaKnown RBP7.77□□□□□ -1.17
SNF7YLR025W ILV6P25605 309 aaKnown RBP7.77□□□□□ -1.17
SNF7YLR025W PLC1P32383 869 aa7.77□□□□□ -1.17
SNF7YLR025W YME1P32795 747 aa7.77□□□□□ -1.17
SNF7YLR025W GYP6P32806 458 aa7.77□□□□□ -1.17
SNF7YLR025W LOS1P33418 1100 aaPredicted RBP7.77□□□□□ -1.17
SNF7YLR025W IRS4P36115 615 aaKnown RBP7.77□□□□□ -1.17
SNF7YLR025W PBP2P38151 413 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
SNF7YLR025W VHC1P38329 1120 aa7.77□□□□□ -1.17
SNF7YLR025W CEM1P39525 442 aa7.77□□□□□ -1.17
SNF7YLR025W YEL025CP39991 1188 aa7.77□□□□□ -1.17
SNF7YLR025W TPO2P53283 614 aa7.77□□□□□ -1.17
SNF7YLR025W ADE12P80210 433 aaKnown RBP7.77□□□□□ -1.17
SNF7YLR025W RSC4Q02206 625 aa7.77□□□□□ -1.17
SNF7YLR025W HEH2Q03281 663 aa7.77□□□□□ -1.17
SNF7YLR025W VHS3Q08438 674 aa7.77□□□□□ -1.17
SNF7YLR025W YOL087CQ99247 1116 aa7.77□□□□□ -1.17
SNF7YLR025W NAT1P12945 854 aaKnown RBP7.76□□□□□ -1.17
SNF7YLR025W TKL1P23254 680 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms