RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	TOM20	P35180	183 aa		5.33	□□□□□ -1.56
EBP2	YKL172W	OAR1	P35731	278 aa		5.33	□□□□□ -1.56
EBP2	YKL172W	BIT2	P38346	545 aa		5.33	□□□□□ -1.56
EBP2	YKL172W	EMP65	P40085	556 aa		5.33	□□□□□ -1.56
EBP2	YKL172W	IES1	P43579	692 aa		5.33	□□□□□ -1.56
EBP2	YKL172W	YPS7	Q06325	596 aa		5.33	□□□□□ -1.56
EBP2	YKL172W	VPS36	Q06696	566 aa		5.33	□□□□□ -1.56
EBP2	YKL172W	MCH5	Q08777	521 aa		5.33	□□□□□ -1.56
EBP2	YKL172W	GLN4	P13188	809 aa	Known RBP	5.32	□□□□□ -1.56
EBP2	YKL172W	YPT7	P32939	208 aa		5.32	□□□□□ -1.56
EBP2	YKL172W	SFB3	P38810	929 aa		5.32	□□□□□ -1.56
EBP2	YKL172W	SPO1	P53541	631 aa		5.32	□□□□□ -1.56
EBP2	YKL172W	COG6	P53959	839 aa		5.32	□□□□□ -1.56
EBP2	YKL172W	ZRT2	Q12436	422 aa		5.32	□□□□□ -1.56
EBP2	YKL172W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.31	□□□□□ -1.56	not detected
EBP2	YKL172W	IME1	P21190	360 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	SEC6	P32844	805 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	FAT1	P38225	669 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	VID28	P40547	921 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	YJR120W	P47157	116 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	TAF4	P50105	388 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	PEX14	P53112	341 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	SLD3	P53135	668 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	SPC105	P53148	917 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	FHN1	P53279	174 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	FOL1	P53848	824 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	RCR2	Q03446	210 aa	Known RBP	5.31	□□□□□ -1.56
EBP2	YKL172W	YMR206W	Q03695	313 aa		5.31	□□□□□ -1.56
EBP2	YKL172W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.31	□□□□□ -1.56	not detected
EBP2	YKL172W	KAR1	P11927	433 aa		5.3	□□□□□ -1.56
EBP2	YKL172W	NTH1	P32356	751 aa		5.3	□□□□□ -1.56
EBP2	YKL172W	BCS1	P32839	456 aa		5.3	□□□□□ -1.56
EBP2	YKL172W	PHO11	P35842	467 aa		5.3	□□□□□ -1.56
EBP2	YKL172W	MOH1	P38191	138 aa		5.3	□□□□□ -1.56
EBP2	YKL172W	PHO12	P38693	467 aa		5.3	□□□□□ -1.56
EBP2	YKL172W	PCL5	P38794	229 aa		5.3	□□□□□ -1.56
EBP2	YKL172W	STP4	Q07351	490 aa		5.3	□□□□□ -1.56
EBP2	YKL172W	CHS5	Q12114	671 aa	Known RBP	5.3	□□□□□ -1.56
EBP2	YKL172W	ABF1	P14164	731 aa		5.29	□□□□□ -1.56
EBP2	YKL172W	HCA4	P20448	770 aa	Known RBP	5.29	□□□□□ -1.56
EBP2	YKL172W	FEN2	P25621	512 aa	Known RBP	5.29	□□□□□ -1.56
EBP2	YKL172W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.29	□□□□□ -1.56	not detected
EBP2	YKL172W	ARG2	P40360	574 aa		5.29	□□□□□ -1.56
EBP2	YKL172W	BUD8	P41698	603 aa		5.29	□□□□□ -1.56
EBP2	YKL172W	STB4	P50104	949 aa		5.29	□□□□□ -1.56
EBP2	YKL172W	SLI1	P53304	468 aa		5.29	□□□□□ -1.56
EBP2	YKL172W	CDC26	P14724	124 aa		5.28	□□□□□ -1.56
EBP2	YKL172W	COX11	P19516	300 aa	Known RBP	5.28	□□□□□ -1.56
EBP2	YKL172W	DGR2	P32330	852 aa		5.28	□□□□□ -1.56
EBP2	YKL172W	MF(ALPHA)2	P32435	120 aa		5.28	□□□□□ -1.56
EBP2	YKL172W	DAL3	P32459	195 aa		5.28	□□□□□ -1.56
EBP2	YKL172W	CBR1	P38626	284 aa	Known RBP	5.28	□□□□□ -1.56
EBP2	YKL172W	SRP68	P38687	599 aa	Known RBP	5.28	□□□□□ -1.56
EBP2	YKL172W	PEA2	P40091	420 aa		5.28	□□□□□ -1.56
EBP2	YKL172W	UBA2	P52488	636 aa		5.28	□□□□□ -1.56
EBP2	YKL172W	SMX3	P54999	86 aa	Predicted RBP	5.28	□□□□□ -1.56
EBP2	YKL172W	MUK1	Q02866	612 aa		5.28	□□□□□ -1.56
EBP2	YKL172W	PEX15	Q08215	383 aa		5.28	□□□□□ -1.56
EBP2	YKL172W	COS111	P38308	924 aa		5.27	□□□□□ -1.57
EBP2	YKL172W	YIL077C	P40508	320 aa		5.27	□□□□□ -1.57
EBP2	YKL172W	HOL1	P53389	586 aa		5.27	□□□□□ -1.57
EBP2	YKL172W	ATG4	P53867	494 aa		5.27	□□□□□ -1.57
EBP2	YKL172W	HLR1	Q04429	423 aa		5.27	□□□□□ -1.57
EBP2	YKL172W	YFT2	Q06676	274 aa		5.27	□□□□□ -1.57
EBP2	YKL172W	THR1	P17423	357 aa	Known RBP	5.26	□□□□□ -1.57
EBP2	YKL172W	PRE4	P30657	266 aa		5.26	□□□□□ -1.57
EBP2	YKL172W	PLC1	P32383	869 aa		5.26	□□□□□ -1.57
EBP2	YKL172W	SER1	P33330	395 aa	Known RBP	5.26	□□□□□ -1.57
EBP2	YKL172W	TFC4	P33339	1025 aa		5.26	□□□□□ -1.57
EBP2	YKL172W	NDC80	P40460	691 aa		5.26	□□□□□ -1.57
EBP2	YKL172W	SDS3	P40505	327 aa		5.26	□□□□□ -1.57
EBP2	YKL172W	FDC1	Q03034	503 aa		5.26	□□□□□ -1.57
EBP2	YKL172W	PHM6	Q05637	104 aa		5.26	□□□□□ -1.57
EBP2	YKL172W	HEM12	P32347	362 aa	Predicted RBP	5.25	□□□□□ -1.57
EBP2	YKL172W	CTP1	P38152	299 aa		5.25	□□□□□ -1.57
EBP2	YKL172W	ENP1	P38333	483 aa	Known RBP	5.25	□□□□□ -1.57
EBP2	YKL172W	YHR033W	P38690	423 aa		5.25	□□□□□ -1.57
EBP2	YKL172W	MPS3	P47069	682 aa		5.25	□□□□□ -1.57
EBP2	YKL172W	RFX1	P48743	811 aa		5.25	□□□□□ -1.57
EBP2	YKL172W	CTR1	P49573	406 aa		5.25	□□□□□ -1.57
EBP2	YKL172W	RGC1	Q06108	1083 aa	Known RBP	5.25	□□□□□ -1.57
EBP2	YKL172W	AIM41	Q12032	185 aa		5.25	□□□□□ -1.57
EBP2	YKL172W	MLH3	Q12083	715 aa		5.25	□□□□□ -1.57
EBP2	YKL172W	USV1	Q12132	391 aa		5.25	□□□□□ -1.57
EBP2	YKL172W	TUF1	P02992	437 aa	Known RBP	5.24	□□□□□ -1.57
EBP2	YKL172W	CDC43	P18898	376 aa		5.24	□□□□□ -1.57
EBP2	YKL172W	HXT4	P32467	576 aa		5.24	□□□□□ -1.57
EBP2	YKL172W	GRX7	P38068	203 aa		5.24	□□□□□ -1.57
EBP2	YKL172W	BDH2	P39713	417 aa		5.24	□□□□□ -1.57
EBP2	YKL172W	PRM2	P40534	656 aa		5.24	□□□□□ -1.57
EBP2	YKL172W	YSH1	Q06224	779 aa	Predicted RBP	5.24	□□□□□ -1.57
EBP2	YKL172W	NGL1	Q08213	363 aa	Known RBP	5.24	□□□□□ -1.57
EBP2	YKL172W	TMA7	Q3E764	64 aa	Known RBP	5.24	□□□□□ -1.57
EBP2	YKL172W	ATP12	P22135	325 aa		5.23	□□□□□ -1.57
EBP2	YKL172W	DMC1	P25453	334 aa		5.23	□□□□□ -1.57
EBP2	YKL172W	GLG1	P36143	616 aa		5.23	□□□□□ -1.57
EBP2	YKL172W	KHA1	P40309	873 aa		5.23	□□□□□ -1.57
EBP2	YKL172W	STU2	P46675	888 aa		5.23	□□□□□ -1.57
EBP2	YKL172W	TMN2	Q04562	672 aa		5.23	□□□□□ -1.57
EBP2	YKL172W	YDL086W	Q07505	273 aa		5.23	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 165.7 ms