RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W OAF3P36023 863 aa11.77□□□□□ -0.53
SIM1YIL123W CCL1P37366 393 aa11.77□□□□□ -0.53
SIM1YIL123W UBX7P38349 436 aa11.77□□□□□ -0.53
SIM1YIL123W TMA108P40462 946 aa11.77□□□□□ -0.53
SIM1YIL123W ATG36P46983 293 aa11.77□□□□□ -0.53
SIM1YIL123W URB2P47108 1174 aa11.77□□□□□ -0.53
SIM1YIL123W YNL134CP53912 376 aaKnown RBP11.77□□□□□ -0.53
SIM1YIL123W USA1Q03714 838 aa11.77□□□□□ -0.53
SIM1YIL123W THI7Q05998 598 aa11.77□□□□□ -0.53
SIM1YIL123W AIM39Q08223 395 aa11.77□□□□□ -0.53
SIM1YIL123W CIR2Q08822 631 aa11.77□□□□□ -0.53
SIM1YIL123W SAT4P25333 603 aaKnown RBP11.76□□□□□ -0.53
SIM1YIL123W GPI10P30777 616 aa11.76□□□□□ -0.53
SIM1YIL123W KDX1P36005 433 aa11.76□□□□□ -0.53
SIM1YIL123W AGP2P38090 596 aa11.76□□□□□ -0.53
SIM1YIL123W AFG3P39925 761 aa11.76□□□□□ -0.53
SIM1YIL123W KHA1P40309 873 aa11.76□□□□□ -0.53
SIM1YIL123W AZR1P50080 613 aa11.76□□□□□ -0.53
SIM1YIL123W YGL140CP53120 1219 aa11.76□□□□□ -0.53
SIM1YIL123W YNL247WP53852 767 aaKnown RBP11.76□□□□□ -0.53
SIM1YIL123W YNL108CP53929 270 aa11.76□□□□□ -0.53
SIM1YIL123W SHR3Q02774 210 aa11.76□□□□□ -0.53
SIM1YIL123W ARO80Q04052 950 aa11.76□□□□□ -0.53
SIM1YIL123W EMP46Q12396 444 aa11.76□□□□□ -0.53
SIM1YIL123W TOM1Q03280 3268 aa11.75□□□□□ -0.53
SIM1YIL123W CBF1P17106 351 aa11.75□□□□□ -0.53
SIM1YIL123W CYS3P31373 394 aaKnown RBP11.75□□□□□ -0.53
SIM1YIL123W SSP1P38871 571 aa11.75□□□□□ -0.53
SIM1YIL123W DSE1P40077 573 aa11.75□□□□□ -0.53
SIM1YIL123W RAD26P40352 1085 aa11.75□□□□□ -0.53
SIM1YIL123W TRS85P46944 698 aa11.75□□□□□ -0.53
SIM1YIL123W YJL045WP47052 634 aa11.75□□□□□ -0.53
SIM1YIL123W HLJ1P48353 224 aa11.75□□□□□ -0.53
SIM1YIL123W DIS3Q08162 1001 aaKnown RBP11.75□□□□□ -0.53
SIM1YIL123W DNL4Q08387 944 aaPredicted RBP11.75□□□□□ -0.53
SIM1YIL123W MDM20Q12387 796 aaKnown RBP11.75□□□□□ -0.53
SIM1YIL123W YOR131CQ12486 218 aa11.75□□□□□ -0.53
SIM1YIL123W SLD2P34252 453 aa11.74□□□□□ -0.53
SIM1YIL123W TBS1P38114 1094 aa11.74□□□□□ -0.53
SIM1YIL123W GDT1P38301 280 aaPredicted RBP11.74□□□□□ -0.53
SIM1YIL123W ERP2P39704 215 aa11.74□□□□□ -0.53
SIM1YIL123W RGD2P43556 714 aa11.74□□□□□ -0.53
SIM1YIL123W CDC55Q00362 526 aa11.74□□□□□ -0.53
SIM1YIL123W VPS72Q03388 795 aa11.74□□□□□ -0.53
SIM1YIL123W VPS54Q12071 889 aa11.74□□□□□ -0.53
SIM1YIL123W RPB2P08518 1224 aaKnown RBP11.73□□□□□ -0.53
SIM1YIL123W POL3P15436 1097 aa11.73□□□□□ -0.53
SIM1YIL123W HEM15P16622 393 aa11.73□□□□□ -0.53
SIM1YIL123W YCR051WP25631 222 aa11.73□□□□□ -0.53
SIM1YIL123W RPT2P40327 437 aaKnown RBP11.73□□□□□ -0.53
SIM1YIL123W YIL054WP40524 105 aa11.73□□□□□ -0.53
SIM1YIL123W ASG7P46993 209 aa11.73□□□□□ -0.53
SIM1YIL123W NCS6P53088 359 aa11.73□□□□□ -0.53
SIM1YIL123W YNL040WP53960 456 aaPredicted RBP11.73□□□□□ -0.53
SIM1YIL123W PRM6Q04705 352 aa11.73□□□□□ -0.53
SIM1YIL123W PIG1Q06216 648 aa11.73□□□□□ -0.53
SIM1YIL123W FAP7Q12055 197 aaPredicted RBP11.73□□□□□ -0.53
SIM1YIL123W YRR1Q12172 810 aa11.73□□□□□ -0.53
SIM1YIL123W VPS5Q92331 675 aa11.73□□□□□ -0.53
SIM1YIL123W RIF1P29539 1916 aa11.73□□□□□ -0.53
SIM1YIL123W SLY1P22213 666 aa11.72□□□□□ -0.53
SIM1YIL123W RSA4P25382 515 aaKnown RBP11.72□□□□□ -0.53
SIM1YIL123W SRB2P34162 210 aa11.72□□□□□ -0.53
SIM1YIL123W DRE2P36152 348 aa11.72□□□□□ -0.53
SIM1YIL123W ABZ1P37254 787 aaPredicted RBP11.72□□□□□ -0.53
SIM1YIL123W YHL026CP38740 315 aa11.72□□□□□ -0.53
SIM1YIL123W TIF35Q04067 274 aaKnown RBP11.72□□□□□ -0.53
SIM1YIL123W YPK1P12688 680 aaKnown RBP11.71□□□□□ -0.53
SIM1YIL123W MEI4P29467 408 aa11.71□□□□□ -0.53
SIM1YIL123W TPS2P31688 896 aaKnown RBP11.71□□□□□ -0.53
SIM1YIL123W FRE1P32791 686 aa11.71□□□□□ -0.53
SIM1YIL123W DUG2P38149 878 aa11.71□□□□□ -0.53
SIM1YIL123W LYS9P38999 446 aa11.71□□□□□ -0.53
SIM1YIL123W FLC2P39719 783 aa11.71□□□□□ -0.53
SIM1YIL123W GCV2P49095 1034 aa11.71□□□□□ -0.53
SIM1YIL123W STB4P50104 949 aa11.71□□□□□ -0.53
SIM1YIL123W YMR027WQ04371 470 aa11.71□□□□□ -0.53
SIM1YIL123W MDM38Q08179 573 aa11.71□□□□□ -0.53
SIM1YIL123W YOR022CQ12204 715 aa11.71□□□□□ -0.53
SIM1YIL123W RRD2Q12461 358 aa11.71□□□□□ -0.53
SIM1YIL123W CLB1P24868 471 aa11.7□□□□□ -0.54
SIM1YIL123W TVP23P38962 199 aa11.7□□□□□ -0.54
SIM1YIL123W INP51P40559 946 aaKnown RBP11.7□□□□□ -0.54
SIM1YIL123W MKT1P40850 830 aaKnown RBP11.7□□□□□ -0.54
SIM1YIL123W RSM26P47141 266 aa11.7□□□□□ -0.54
SIM1YIL123W ALT2P52892 507 aa11.7□□□□□ -0.54
SIM1YIL123W COG6P53959 839 aa11.7□□□□□ -0.54
SIM1YIL123W MUB1Q03162 620 aa11.7□□□□□ -0.54
SIM1YIL123W CDC73Q06697 393 aa11.7□□□□□ -0.54
SIM1YIL123W MPC54Q08550 464 aa11.7□□□□□ -0.54
SIM1YIL123W NCA2Q12374 616 aa11.7□□□□□ -0.54
SIM1YIL123W CDC24P11433 854 aaPredicted RBP11.69□□□□□ -0.54
SIM1YIL123W VPS3P23643 1011 aa11.69□□□□□ -0.54
SIM1YIL123W CDC10P25342 322 aaKnown RBP11.69□□□□□ -0.54
SIM1YIL123W MGT1P26188 188 aa11.69□□□□□ -0.54
SIM1YIL123W GAC1P28006 793 aa11.69□□□□□ -0.54
SIM1YIL123W DUS1P53759 423 aaKnown RBP11.69□□□□□ -0.54
SIM1YIL123W SLG1P54867 378 aa11.69□□□□□ -0.54
SIM1YIL123W STP1Q00947 519 aa11.69□□□□□ -0.54
SIM1YIL123W ELP3Q02908 557 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms