RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W YPT7P32939 208 aa4.69□□□□□ -1.66
PRP18YGR006W SER1P33330 395 aaKnown RBP4.69□□□□□ -1.66
PRP18YGR006W HIS7P33734 552 aaKnown RBP4.69□□□□□ -1.66
PRP18YGR006W FMO1P38866 432 aa4.69□□□□□ -1.66
PRP18YGR006W FMP52P40008 231 aa4.69□□□□□ -1.66
PRP18YGR006W DAS1P47005 663 aa4.69□□□□□ -1.66
PRP18YGR006W MSE1P48525 536 aa4.69□□□□□ -1.66
PRP18YGR006W KIN4Q01919 800 aa4.69□□□□□ -1.66
PRP18YGR006W GSF2Q04697 403 aaKnown RBP4.69□□□□□ -1.66
PRP18YGR006W PHM6Q05637 104 aa4.69□□□□□ -1.66
PRP18YGR006W THI22Q06490 572 aa4.69□□□□□ -1.66
PRP18YGR006W STP4Q07351 490 aa4.69□□□□□ -1.66
PRP18YGR006W IRC13Q08630 104 aa4.69□□□□□ -1.66
PRP18YGR006W RPS9BP05755 195 aaKnown RBP4.68□□□□□ -1.66
PRP18YGR006W CDC26P14724 124 aa4.68□□□□□ -1.66
PRP18YGR006W IME1P21190 360 aa4.68□□□□□ -1.66
PRP18YGR006W DGR2P32330 852 aa4.68□□□□□ -1.66
PRP18YGR006W PEA2P40091 420 aa4.68□□□□□ -1.66
PRP18YGR006W TAF4P50105 388 aa4.68□□□□□ -1.66
PRP18YGR006W YAP1802P53309 568 aa4.68□□□□□ -1.66
PRP18YGR006W HOL1P53389 586 aa4.68□□□□□ -1.66
PRP18YGR006W SND1Q04007 877 aa4.68□□□□□ -1.66
PRP18YGR006W PUS9Q12069 462 aa4.68□□□□□ -1.66
PRP18YGR006W YKL033W-AQ86ZR7 236 aa4.68□□□□□ -1.66
PRP18YGR006W MF(ALPHA)2P32435 120 aa4.67□□□□□ -1.66
PRP18YGR006W HIR1P32479 840 aa4.67□□□□□ -1.66
PRP18YGR006W SRP68P38687 599 aaKnown RBP4.67□□□□□ -1.66
PRP18YGR006W PIG2P40187 538 aa4.67□□□□□ -1.66
PRP18YGR006W BUD8P41698 603 aa4.67□□□□□ -1.66
PRP18YGR006W SPO1P53541 631 aa4.67□□□□□ -1.66
PRP18YGR006W SUN4P53616 420 aa4.67□□□□□ -1.66
PRP18YGR006W RIA1P53893 1110 aa4.67□□□□□ -1.66
PRP18YGR006W RCR2Q03446 210 aaKnown RBP4.67□□□□□ -1.66
PRP18YGR006W SIR3P06701 978 aa4.66□□□□□ -1.66
PRP18YGR006W PRP28P23394 588 aa4.66□□□□□ -1.66
PRP18YGR006W HXT4P32467 576 aa4.66□□□□□ -1.66
PRP18YGR006W SEC6P32844 805 aa4.66□□□□□ -1.66
PRP18YGR006W PAN2P53010 1115 aaPredicted RBP4.66□□□□□ -1.66
PRP18YGR006W TEL2P53038 688 aa4.66□□□□□ -1.66
PRP18YGR006W NGL1Q08213 363 aaKnown RBP4.66□□□□□ -1.66
PRP18YGR006W SLX4Q12098 748 aa4.66□□□□□ -1.66
PRP18YGR006W ZRT2Q12436 422 aa4.66□□□□□ -1.66
PRP18YGR006W ATP12P22135 325 aa4.65□□□□□ -1.67
PRP18YGR006W BCS1P32839 456 aa4.65□□□□□ -1.67
PRP18YGR006W PPS1P38148 807 aa4.65□□□□□ -1.67
PRP18YGR006W SFB3P38810 929 aa4.65□□□□□ -1.67
PRP18YGR006W YJR008WP47085 338 aa4.65□□□□□ -1.67
PRP18YGR006W YNL034WP53963 612 aa4.65□□□□□ -1.67
PRP18YGR006W YNL018CP53976 612 aa4.65□□□□□ -1.67
PRP18YGR006W OMS1Q06668 471 aa4.65□□□□□ -1.67
PRP18YGR006W YOL057WQ08225 711 aa4.65□□□□□ -1.67
PRP18YGR006W ATP4P05626 244 aa4.64□□□□□ -1.67
PRP18YGR006W FEN2P25621 512 aaKnown RBP4.64□□□□□ -1.67
PRP18YGR006W COS111P38308 924 aa4.64□□□□□ -1.67
PRP18YGR006W YHR033WP38690 423 aa4.64□□□□□ -1.67
PRP18YGR006W YHL017WP38745 532 aa4.64□□□□□ -1.67
PRP18YGR006W IRC5P43610 853 aa4.64□□□□□ -1.67
PRP18YGR006W TGL2P54857 326 aa4.64□□□□□ -1.67
PRP18YGR006W SSL2Q00578 843 aa4.64□□□□□ -1.67
PRP18YGR006W ECM38Q05902 660 aaPredicted RBP4.64□□□□□ -1.67
PRP18YGR006W CHS5Q12114 671 aaKnown RBP4.64□□□□□ -1.67
PRP18YGR006W ACF2Q12168 779 aa4.64□□□□□ -1.67
PRP18YGR006W PRE4P30657 266 aa4.63□□□□□ -1.67
PRP18YGR006W NTH1P32356 751 aa4.63□□□□□ -1.67
PRP18YGR006W NIC96P34077 839 aa4.63□□□□□ -1.67
PRP18YGR006W PHO11P35842 467 aa4.63□□□□□ -1.67
PRP18YGR006W PHO12P38693 467 aa4.63□□□□□ -1.67
PRP18YGR006W CHS7P38843 316 aa4.63□□□□□ -1.67
PRP18YGR006W HRB1P38922 454 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
PRP18YGR006W YIL077CP40508 320 aa4.63□□□□□ -1.67
PRP18YGR006W FHN1P53279 174 aa4.63□□□□□ -1.67
PRP18YGR006W TIM44Q01852 431 aa4.63□□□□□ -1.67
PRP18YGR006W MTD1Q02046 320 aaKnown RBP4.63□□□□□ -1.67
PRP18YGR006W YFT2Q06676 274 aa4.63□□□□□ -1.67
PRP18YGR006W CWC2Q12046 339 aaPredicted RBP4.63□□□□□ -1.67
PRP18YGR006W MPD2Q99316 277 aa4.63□□□□□ -1.67
PRP18YGR006W YEL076C-AP0CX16 216 aa4.62□□□□□ -1.67
PRP18YGR006W YLR464WP0CX17 216 aa4.62□□□□□ -1.67
PRP18YGR006W SST2P11972 698 aaKnown RBP4.62□□□□□ -1.67
PRP18YGR006W STL1P39932 569 aa4.62□□□□□ -1.67
PRP18YGR006W YEL076CP39971 216 aa4.62□□□□□ -1.67
PRP18YGR006W PRM2P40534 656 aa4.62□□□□□ -1.67
PRP18YGR006W CNM67P53865 581 aaKnown RBP4.62□□□□□ -1.67
PRP18YGR006W SQS1P53866 767 aaKnown RBP4.62□□□□□ -1.67
PRP18YGR006W FDC1Q03034 503 aa4.62□□□□□ -1.67
PRP18YGR006W HLR1Q04429 423 aa4.62□□□□□ -1.67
PRP18YGR006W AIM41Q12032 185 aa4.62□□□□□ -1.67
PRP18YGR006W VPS5Q92331 675 aa4.62□□□□□ -1.67
PRP18YGR006W TUF1P02992 437 aaKnown RBP4.61□□□□□ -1.67
PRP18YGR006W ABF1P14164 731 aa4.61□□□□□ -1.67
PRP18YGR006W YKL133CP36066 463 aa4.61□□□□□ -1.67
PRP18YGR006W SSP120P39931 234 aaKnown RBP4.61□□□□□ -1.67
PRP18YGR006W RFX1P48743 811 aa4.61□□□□□ -1.67
PRP18YGR006W PEF1P53238 335 aa4.61□□□□□ -1.67
PRP18YGR006W CTF4Q01454 927 aa4.61□□□□□ -1.67
PRP18YGR006W RGC1Q06108 1083 aaKnown RBP4.61□□□□□ -1.67
PRP18YGR006W HBT1Q07653 1046 aaKnown RBP4.61□□□□□ -1.67
PRP18YGR006W PSF3Q12146 194 aa4.61□□□□□ -1.67
PRP18YGR006W NYV1Q12255 253 aa4.61□□□□□ -1.67
PRP18YGR006W PNS1Q12412 539 aa4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms