RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C IVY1Q04934 453 aa11.4□□□□□ -0.58
SPC25YER018C GPM2Q12008 311 aa11.4□□□□□ -0.58
SPC25YER018C ADE3P07245 946 aaKnown RBP11.39□□□□□ -0.59
SPC25YER018C HMT1P38074 348 aa11.39□□□□□ -0.59
SPC25YER018C PCM1P38628 557 aaKnown RBP11.39□□□□□ -0.59
SPC25YER018C APM2P38700 605 aa11.39□□□□□ -0.59
SPC25YER018C INP52P50942 1183 aa11.39□□□□□ -0.59
SPC25YER018C MCM6P53091 1017 aaKnown RBP11.39□□□□□ -0.59
SPC25YER018C NUT1P53114 1132 aa11.39□□□□□ -0.59
SPC25YER018C NOG2P53742 486 aaKnown RBP11.39□□□□□ -0.59
SPC25YER018C SXM1Q04175 944 aaKnown RBP11.39□□□□□ -0.59
SPC25YER018C URH1Q04179 340 aa11.39□□□□□ -0.59
SPC25YER018C YML083CQ04526 418 aa11.39□□□□□ -0.59
SPC25YER018C PRM6Q04705 352 aa11.39□□□□□ -0.59
SPC25YER018C DIS3Q08162 1001 aaKnown RBP11.39□□□□□ -0.59
SPC25YER018C AIM39Q08223 395 aa11.39□□□□□ -0.59
SPC25YER018C YRR1Q12172 810 aa11.39□□□□□ -0.59
SPC25YER018C EST1P17214 699 aaPredicted RBP11.38□□□□□ -0.59
SPC25YER018C SEC1P30619 724 aaKnown RBP11.38□□□□□ -0.59
SPC25YER018C TKL2P33315 681 aa11.38□□□□□ -0.59
SPC25YER018C SRB2P34162 210 aa11.38□□□□□ -0.59
SPC25YER018C ABZ1P37254 787 aaPredicted RBP11.38□□□□□ -0.59
SPC25YER018C RFS1P38234 210 aaKnown RBP11.38□□□□□ -0.59
SPC25YER018C CCT4P39078 528 aaKnown RBP11.38□□□□□ -0.59
SPC25YER018C TGL3P40308 642 aa11.38□□□□□ -0.59
SPC25YER018C YNL011CP53980 444 aa11.38□□□□□ -0.59
SPC25YER018C UFO1Q04511 668 aa11.38□□□□□ -0.59
SPC25YER018C ECI1Q05871 280 aa11.38□□□□□ -0.59
SPC25YER018C MRI1Q06489 411 aaKnown RBP11.38□□□□□ -0.59
SPC25YER018C MRN1Q08925 612 aaKnown RBP RIP-Chip data11.38□□□□□ -0.59not detected
SPC25YER018C AIM41Q12032 185 aa11.38□□□□□ -0.59
SPC25YER018C PUT4P15380 627 aa11.37□□□□□ -0.59
SPC25YER018C TRX1P22217 103 aaKnown RBP11.37□□□□□ -0.59
SPC25YER018C VPH1P32563 840 aaKnown RBP11.37□□□□□ -0.59
SPC25YER018C RGD1P38339 666 aa11.37□□□□□ -0.59
SPC25YER018C PMC1P38929 1173 aaPredicted RBP11.37□□□□□ -0.59
SPC25YER018C YFL052WP43551 465 aa11.37□□□□□ -0.59
SPC25YER018C ELP3Q02908 557 aaKnown RBP11.37□□□□□ -0.59
SPC25YER018C TAF9Q05027 157 aa11.37□□□□□ -0.59
SPC25YER018C ATG23Q06671 453 aa11.37□□□□□ -0.59
SPC25YER018C DDC1Q08949 612 aa11.37□□□□□ -0.59
SPC25YER018C HRT3Q12347 344 aa11.37□□□□□ -0.59
SPC25YER018C ATP1P07251 545 aaKnown RBP11.36□□□□□ -0.59
SPC25YER018C PMS1P14242 873 aa11.36□□□□□ -0.59
SPC25YER018C AEP2P22136 580 aa11.36□□□□□ -0.59
SPC25YER018C YBR284WP38150 797 aa11.36□□□□□ -0.59
SPC25YER018C FMP10P40098 244 aa11.36□□□□□ -0.59
SPC25YER018C KHA1P40309 873 aa11.36□□□□□ -0.59
SPC25YER018C FAF1P40546 346 aaPredicted RBP11.36□□□□□ -0.59
SPC25YER018C VTC4P47075 721 aa11.36□□□□□ -0.59
SPC25YER018C MET13P53128 600 aa11.36□□□□□ -0.59
SPC25YER018C VTI1Q04338 217 aa11.36□□□□□ -0.59
SPC25YER018C RCL1Q08096 367 aaPredicted RBP11.36□□□□□ -0.59
SPC25YER018C AHC1Q12433 566 aa11.36□□□□□ -0.59
SPC25YER018C MAS1P10507 462 aa11.35□□□□□ -0.59
SPC25YER018C CAP1P28495 268 aaKnown RBP11.35□□□□□ -0.59
SPC25YER018C CNS1P33313 385 aa11.35□□□□□ -0.59
SPC25YER018C RRP1P35178 278 aaPredicted RBP11.35□□□□□ -0.59
SPC25YER018C YBR056WP38081 501 aa11.35□□□□□ -0.59
SPC25YER018C SWC5P38326 303 aa11.35□□□□□ -0.59
SPC25YER018C SAK1P38990 1142 aa11.35□□□□□ -0.59
SPC25YER018C AVT2P39981 480 aa11.35□□□□□ -0.59
SPC25YER018C YIL054WP40524 105 aa11.35□□□□□ -0.59
SPC25YER018C SAP185P40856 1058 aa11.35□□□□□ -0.59
SPC25YER018C SLG1P54867 378 aa11.35□□□□□ -0.59
SPC25YER018C ADA2Q02336 434 aa11.35□□□□□ -0.59
SPC25YER018C LEA1Q08963 238 aaPredicted RBP11.35□□□□□ -0.59
SPC25YER018C VPS5Q92331 675 aa11.35□□□□□ -0.59
SPC25YER018C APM4Q99186 491 aa11.35□□□□□ -0.59
SPC25YER018C YLR422WQ06409 1932 aa11.35□□□□□ -0.59
SPC25YER018C HSL7P38274 827 aa11.34□□□□□ -0.59
SPC25YER018C RAD55P38953 406 aa11.34□□□□□ -0.59
SPC25YER018C CDC1P40986 491 aa11.34□□□□□ -0.59
SPC25YER018C TAF1P46677 1066 aa11.34□□□□□ -0.59
SPC25YER018C HEH2Q03281 663 aa11.34□□□□□ -0.59
SPC25YER018C RKM2Q03942 479 aa11.34□□□□□ -0.59
SPC25YER018C THI20Q08224 551 aa11.34□□□□□ -0.59
SPC25YER018C NBP2Q12163 236 aa11.34□□□□□ -0.59
SPC25YER018C NOP58Q12499 511 aaKnown RBP11.34□□□□□ -0.59
SPC25YER018C PDR1P12383 1068 aa11.33□□□□□ -0.6
SPC25YER018C RPO26P20435 155 aa11.33□□□□□ -0.6
SPC25YER018C GCG1P32656 232 aaKnown RBP11.33□□□□□ -0.6
SPC25YER018C END3P39013 349 aa11.33□□□□□ -0.6
SPC25YER018C MMF1P40185 145 aaKnown RBP11.33□□□□□ -0.6
SPC25YER018C YIR016WP40572 265 aa11.33□□□□□ -0.6
SPC25YER018C YML6P51998 286 aa11.33□□□□□ -0.6
SPC25YER018C RIM8P53179 542 aa11.33□□□□□ -0.6
SPC25YER018C YGR283CP53336 341 aaPredicted RBP11.33□□□□□ -0.6
SPC25YER018C YNL040WP53960 456 aaPredicted RBP11.33□□□□□ -0.6
SPC25YER018C APC5Q08683 685 aa11.33□□□□□ -0.6
SPC25YER018C APL5Q08951 932 aaKnown RBP11.33□□□□□ -0.6
SPC25YER018C SAM3Q08986 587 aa11.33□□□□□ -0.6
SPC25YER018C RMP1Q12530 201 aa11.33□□□□□ -0.6
SPC25YER018C TUB3P09734 445 aaKnown RBP11.32□□□□□ -0.6
SPC25YER018C PGS1P25578 521 aa11.32□□□□□ -0.6
SPC25YER018C RAD27P26793 382 aa11.32□□□□□ -0.6
SPC25YER018C OLA1P38219 394 aaKnown RBP11.32□□□□□ -0.6
SPC25YER018C YBR053CP38235 358 aa11.32□□□□□ -0.6
SPC25YER018C SIF2P38262 535 aa11.32□□□□□ -0.6
SPC25YER018C TIF5P38431 405 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 186.1 ms