RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C SLG1P54867 378 aa6.07□□□□□ -1.44
SEC20YDR498C MTG1Q03151 367 aaPredicted RBP6.07□□□□□ -1.44
SEC20YDR498C PNP1Q05788 311 aa6.07□□□□□ -1.44
SEC20YDR498C CDD1Q06549 142 aa6.07□□□□□ -1.44
SEC20YDR498C ZRT2Q12436 422 aa6.07□□□□□ -1.44
SEC20YDR498C UBR1P19812 1950 aa6.06□□□□□ -1.44
SEC20YDR498C WHI2P12611 486 aa6.06□□□□□ -1.44
SEC20YDR498C NAT1P12945 854 aaKnown RBP6.06□□□□□ -1.44
SEC20YDR498C CBF1P17106 351 aa6.06□□□□□ -1.44
SEC20YDR498C RPT1P33299 467 aaKnown RBP6.06□□□□□ -1.44
SEC20YDR498C MSG5P38590 489 aa6.06□□□□□ -1.44
SEC20YDR498C TMN3P40071 706 aa6.06□□□□□ -1.44
SEC20YDR498C PSY2P40164 858 aa6.06□□□□□ -1.44
SEC20YDR498C SKP2P42843 763 aa6.06□□□□□ -1.44
SEC20YDR498C NCS6P53088 359 aa6.06□□□□□ -1.44
SEC20YDR498C JJJ1P53863 590 aa6.06□□□□□ -1.44
SEC20YDR498C EEB1Q02891 456 aa6.06□□□□□ -1.44
SEC20YDR498C MSC2Q03455 724 aa6.06□□□□□ -1.44
SEC20YDR498C STE20Q03497 939 aaKnown RBP6.06□□□□□ -1.44
SEC20YDR498C USA1Q03714 838 aa6.06□□□□□ -1.44
SEC20YDR498C ATG16Q03818 150 aa6.06□□□□□ -1.44
SEC20YDR498C ALR1Q08269 859 aa6.06□□□□□ -1.44
SEC20YDR498C RAD59Q12223 238 aa6.06□□□□□ -1.44
SEC20YDR498C MOD5P07884 428 aa6.05□□□□□ -1.44
SEC20YDR498C CHS1P08004 1131 aa6.05□□□□□ -1.44
SEC20YDR498C PEP5P12868 1029 aa6.05□□□□□ -1.44
SEC20YDR498C ADE2P21264 571 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C SAT4P25333 603 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C DBF4P32325 704 aa6.05□□□□□ -1.44
SEC20YDR498C PLC1P32383 869 aa6.05□□□□□ -1.44
SEC20YDR498C ECM2P38241 364 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C SPP381P38282 291 aaPredicted RBP6.05□□□□□ -1.44
SEC20YDR498C QNS1P38795 714 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C TVP23P38962 199 aa6.05□□□□□ -1.44
SEC20YDR498C YER186CP40101 306 aa6.05□□□□□ -1.44
SEC20YDR498C SMX2P40204 77 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C AIM21P40563 679 aa6.05□□□□□ -1.44
SEC20YDR498C RPA14P50106 137 aa6.05□□□□□ -1.44
SEC20YDR498C YGL036WP53185 909 aaPredicted RBP6.05□□□□□ -1.44
SEC20YDR498C NOG2P53742 486 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C DAK1P54838 584 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C MRS2Q01926 470 aa6.05□□□□□ -1.44
SEC20YDR498C CUS1Q02554 436 aaPredicted RBP6.05□□□□□ -1.44
SEC20YDR498C MUK1Q02866 612 aa6.05□□□□□ -1.44
SEC20YDR498C DOT1Q04089 582 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C STE23Q06010 1027 aa6.05□□□□□ -1.44
SEC20YDR498C YOR059CQ08448 450 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C MET7Q08645 548 aa6.05□□□□□ -1.44
SEC20YDR498C APL5Q08951 932 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C RIO1Q12196 484 aaKnown RBP6.05□□□□□ -1.44
SEC20YDR498C HIF1Q12373 385 aa6.05□□□□□ -1.44
SEC20YDR498C GAL10P04397 699 aa6.04□□□□□ -1.44
SEC20YDR498C YML002WP0CF17 737 aa6.04□□□□□ -1.44
SEC20YDR498C HEM15P16622 393 aa6.04□□□□□ -1.44
SEC20YDR498C TPS2P31688 896 aaKnown RBP6.04□□□□□ -1.44
SEC20YDR498C ABD1P32783 436 aaPredicted RBP6.04□□□□□ -1.44
SEC20YDR498C NFU1P32860 256 aa6.04□□□□□ -1.44
SEC20YDR498C TIM23P32897 222 aa6.04□□□□□ -1.44
SEC20YDR498C TRM2P33753 639 aa6.04□□□□□ -1.44
SEC20YDR498C ABZ1P37254 787 aaPredicted RBP6.04□□□□□ -1.44
SEC20YDR498C PAM1P37304 830 aaKnown RBP6.04□□□□□ -1.44
SEC20YDR498C YBL036CP38197 257 aa6.04□□□□□ -1.44
SEC20YDR498C UBX7P38349 436 aa6.04□□□□□ -1.44
SEC20YDR498C YHR054CP38780 354 aa6.04□□□□□ -1.44
SEC20YDR498C RSC30P38781 883 aa6.04□□□□□ -1.44
SEC20YDR498C PMC1P38929 1173 aaPredicted RBP6.04□□□□□ -1.44
SEC20YDR498C CCT2P39076 527 aaKnown RBP6.04□□□□□ -1.44
SEC20YDR498C RAD26P40352 1085 aa6.04□□□□□ -1.44
SEC20YDR498C INP51P40559 946 aaKnown RBP6.04□□□□□ -1.44
SEC20YDR498C YJR039WP47107 1121 aa6.04□□□□□ -1.44
SEC20YDR498C JJJ3P47138 172 aa6.04□□□□□ -1.44
SEC20YDR498C SGM1P47166 707 aa6.04□□□□□ -1.44
SEC20YDR498C YGL140CP53120 1219 aa6.04□□□□□ -1.44
SEC20YDR498C UTP6Q02354 440 aaKnown RBP6.04□□□□□ -1.44
SEC20YDR498C ICL2Q12031 575 aa6.04□□□□□ -1.44
SEC20YDR498C HFI1Q12060 488 aa6.04□□□□□ -1.44
SEC20YDR498C YPR027CQ12079 277 aa6.04□□□□□ -1.44
SEC20YDR498C SGT2Q12118 346 aaKnown RBP6.04□□□□□ -1.44
SEC20YDR498C SUT2Q12286 268 aa6.04□□□□□ -1.44
SEC20YDR498C GCR1P07261 785 aa6.03□□□□□ -1.44
SEC20YDR498C YER152CP10356 443 aa6.03□□□□□ -1.44
SEC20YDR498C AEP2P22136 580 aa6.03□□□□□ -1.44
SEC20YDR498C MSS51P32335 436 aa6.03□□□□□ -1.44
SEC20YDR498C SEG2P34250 1132 aa6.03□□□□□ -1.44
SEC20YDR498C VHC1P38329 1120 aa6.03□□□□□ -1.44
SEC20YDR498C TIF5P38431 405 aaKnown RBP6.03□□□□□ -1.44
SEC20YDR498C SPC72P39723 622 aa6.03□□□□□ -1.44
SEC20YDR498C KHA1P40309 873 aa6.03□□□□□ -1.44
SEC20YDR498C SAP185P40856 1058 aa6.03□□□□□ -1.44
SEC20YDR498C SNZ3P43545 298 aa6.03□□□□□ -1.44
SEC20YDR498C URB2P47108 1174 aa6.03□□□□□ -1.44
SEC20YDR498C STB4P50104 949 aa6.03□□□□□ -1.44
SEC20YDR498C SNZ2P53824 298 aa6.03□□□□□ -1.44
SEC20YDR498C GPD1Q00055 391 aaKnown RBP6.03□□□□□ -1.44
SEC20YDR498C PIG1Q06216 648 aa6.03□□□□□ -1.44
SEC20YDR498C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
SEC20YDR498C DIS3Q08162 1001 aaKnown RBP6.03□□□□□ -1.44
SEC20YDR498C TRX1P22217 103 aaKnown RBP6.02□□□□□ -1.45
SEC20YDR498C VBA3P25594 458 aa6.02□□□□□ -1.45
SEC20YDR498C YCR015CP25616 317 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms