RNA–Protein interactions for RNA: YDR104C

SPO71, Transcript of Meiosis-specific protein required for spore wall formation, yeast

Gene SPO71, Length 3,738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO71	YDR104C	YPD1	Q07688	167 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SPO71	YDR104C	NSE1	Q07913	336 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	COQ4	O13525	335 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	ATP4	P05626	244 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SPO71	YDR104C	RPC40	P07703	335 aa	Known RBP	3.19	□□□□□ -1.9
SPO71	YDR104C	DPB2	P24482	689 aa	Predicted RBP	3.19	□□□□□ -1.9
SPO71	YDR104C	RAM2	P29703	316 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	YBL010C	P32788	280 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	PPG1	P32838	368 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	SMC1	P32908	1225 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	MYO3	P36006	1272 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	BSD2	P38356	321 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	YMR262W	P38430	313 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	DED81	P38707	554 aa	Known RBP	3.19	□□□□□ -1.9
SPO71	YDR104C	SMF2	P38778	549 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	PCF11	P39081	626 aa	Predicted RBP	3.19	□□□□□ -1.9
SPO71	YDR104C	MAD3	P47074	515 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	MDE1	P47095	244 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	YNL146W	P53906	100 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	RMD1	Q03441	430 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	ARP10	Q04549	284 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	NDE2	Q07500	545 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	REC8	Q12188	680 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	RRI2	Q12348	645 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	YOS9	Q99220	542 aa		3.19	□□□□□ -1.9
SPO71	YDR104C	ENO1	P00924	437 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	ENO2	P00925	437 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	INH1	P01097	85 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
SPO71	YDR104C	HEM3	P28789	327 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	PPQ1	P32945	549 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	CHK1	P38147	527 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	CCZ1	P38273	704 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	JEM1	P40358	645 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	YFH7	P43591	353 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	ABM1	P47146	123 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	KAP114	P53067	1004 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	YNR063W	P53749	607 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	DSE4	P53753	1117 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	YDR090C	Q03193	310 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	BUL2	Q03758	920 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	GLO2	Q05584	274 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	MLC2	Q06580	163 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	ATG23	Q06671	453 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	ADY3	Q07732	790 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	SMC5	Q08204	1093 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	ADF1	Q2V2Q1	113 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	CMC2	Q3E7A4	109 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	IPP1	P00817	287 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	TIF1	P10081	395 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	RDS2	P19541	446 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	ZIP1	P31111	875 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	SUV3	P32580	737 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	GYP6	P32806	458 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	PMT1	P33775	817 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	YKT6	P36015	200 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	DLD3	P39976	496 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	GYP8	P43570	497 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	SAE2	P46946	345 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	HGH1	P48362	394 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	HFM1	P51979	1187 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	GTR1	Q00582	310 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	MAK10	Q02197	733 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	TBF1	Q02457	562 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	ARP9	Q05123	467 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	RBS1	Q05672	457 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	GMC2	Q06201	188 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	PIG1	Q06216	648 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	YPR022C	Q12139	1133 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	RTR2	Q12378	196 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	APC1	P53886	1748 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	HIS4	P00815	799 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	RAD1	P06777	1100 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	GCD1	P09032	578 aa	Predicted RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	VMA2	P16140	517 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	UBC1	P21734	215 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	SCJ1	P25303	377 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	SRO9	P25567	434 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	NIP1	P32497	812 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	MDJ1	P35191	511 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	SDS22	P36047	338 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	MAL33	P38157	468 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	YHR131C	P38835	850 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	UTP9	P38882	575 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	CCT6	P39079	546 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	DDI1	P40087	428 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	VPS70	P47161	811 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	LSB1	P53281	241 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	MAL13	P53338	473 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	FOX2	Q02207	900 aa	Known RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	MMT1	Q03218	510 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	GAD1	Q04792	585 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	NTG2	Q08214	380 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	YDL109C	Q12103	647 aa		3.18	□□□□□ -1.9
SPO71	YDR104C	SNU23	Q12368	194 aa	Predicted RBP	3.18	□□□□□ -1.9
SPO71	YDR104C	USO1	P25386	1790 aa		3.17	□□□□□ -1.9
SPO71	YDR104C	CDC19	P00549	500 aa	Known RBP	3.17	□□□□□ -1.9
SPO71	YDR104C	SNF1	P06782	633 aa	Known RBP	3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 96.7 ms