RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C MEF1P25039 761 aa6.6□□□□□ -1.35
CDC34YDR054C RPC53P25441 422 aa6.6□□□□□ -1.35
CDC34YDR054C PTP2P29461 750 aa6.6□□□□□ -1.35
CDC34YDR054C NAM7P30771 971 aaKnown RBP6.6□□□□□ -1.35
CDC34YDR054C ATG19P35193 415 aa6.6□□□□□ -1.35
CDC34YDR054C KSP1P38691 1029 aaKnown RBP6.6□□□□□ -1.35
CDC34YDR054C EAF5P39995 279 aa6.6□□□□□ -1.35
CDC34YDR054C VFA1P40080 203 aa6.6□□□□□ -1.35
CDC34YDR054C SAD1P43589 448 aa6.6□□□□□ -1.35
CDC34YDR054C TAF1P46677 1066 aa6.6□□□□□ -1.35
CDC34YDR054C CAF130P53280 1122 aaPredicted RBP6.6□□□□□ -1.35
CDC34YDR054C BRE5P53741 515 aaKnown RBP6.6□□□□□ -1.35
CDC34YDR054C COQ9Q05779 260 aa6.6□□□□□ -1.35
CDC34YDR054C YLR001CQ07895 862 aa6.6□□□□□ -1.35
CDC34YDR054C SMC5Q08204 1093 aa6.6□□□□□ -1.35
CDC34YDR054C ATG9Q12142 997 aa6.6□□□□□ -1.35
CDC34YDR054C RRP6Q12149 733 aaKnown RBP6.6□□□□□ -1.35
CDC34YDR054C RTP1Q12751 981 aa6.6□□□□□ -1.35
CDC34YDR054C SPO12P17123 173 aa6.59□□□□□ -1.35
CDC34YDR054C RTG1P32607 177 aa6.59□□□□□ -1.35
CDC34YDR054C BCS1P32839 456 aa6.59□□□□□ -1.35
CDC34YDR054C EBP2P36049 427 aaKnown RBP6.59□□□□□ -1.35
CDC34YDR054C UBP13P38187 747 aa6.59□□□□□ -1.35
CDC34YDR054C CCC2P38995 1004 aa6.59□□□□□ -1.35
CDC34YDR054C MXR1P40029 184 aa6.59□□□□□ -1.35
CDC34YDR054C SUM1P46676 1062 aa6.59□□□□□ -1.35
CDC34YDR054C PSP2P50109 593 aaKnown RBP6.59□□□□□ -1.35
CDC34YDR054C RTT102P53330 157 aa6.59□□□□□ -1.35
CDC34YDR054C MSH6Q03834 1242 aa6.59□□□□□ -1.35
CDC34YDR054C YLR287CQ05881 355 aa6.59□□□□□ -1.35
CDC34YDR054C CUR1Q06469 252 aa6.59□□□□□ -1.35
CDC34YDR054C HDA2Q06629 674 aa6.59□□□□□ -1.35
CDC34YDR054C PMT7Q06644 662 aa6.59□□□□□ -1.35
CDC34YDR054C MLH2Q07980 695 aa6.59□□□□□ -1.35
CDC34YDR054C HMI1Q12039 706 aa6.59□□□□□ -1.35
CDC34YDR054C CMR1Q12510 522 aaKnown RBP6.59□□□□□ -1.35
CDC34YDR054C MDM12Q92328 271 aa6.59□□□□□ -1.35
CDC34YDR054C GAL1P04385 528 aa6.58□□□□□ -1.36
CDC34YDR054C INO1P11986 533 aa6.58□□□□□ -1.36
CDC34YDR054C CHS2P14180 963 aa6.58□□□□□ -1.36
CDC34YDR054C SEC23P15303 768 aaKnown RBP6.58□□□□□ -1.36
CDC34YDR054C TUP1P16649 713 aa6.58□□□□□ -1.36
CDC34YDR054C EFT1P32324 842 aaKnown RBP6.58□□□□□ -1.36
CDC34YDR054C XRS2P33301 854 aa6.58□□□□□ -1.36
CDC34YDR054C YKL023WP36103 277 aaKnown RBP6.58□□□□□ -1.36
CDC34YDR054C HSE1P38753 452 aa6.58□□□□□ -1.36
CDC34YDR054C PEX28P38848 579 aa6.58□□□□□ -1.36
CDC34YDR054C ALA1P40825 983 aaKnown RBP6.58□□□□□ -1.36
CDC34YDR054C TAD1P53065 400 aa6.58□□□□□ -1.36
CDC34YDR054C TAN1P53072 289 aaPredicted RBP6.58□□□□□ -1.36
CDC34YDR054C VID30P53076 958 aa6.58□□□□□ -1.36
CDC34YDR054C ENV11P53246 860 aa6.58□□□□□ -1.36
CDC34YDR054C YNL146WP53906 100 aa6.58□□□□□ -1.36
CDC34YDR054C YNL035CP53962 389 aaKnown RBP6.58□□□□□ -1.36
CDC34YDR054C SIW14P53965 281 aa6.58□□□□□ -1.36
CDC34YDR054C TIM8P57744 87 aa6.58□□□□□ -1.36
CDC34YDR054C IES4Q08561 116 aa6.58□□□□□ -1.36
CDC34YDR054C ICL2Q12031 575 aa6.58□□□□□ -1.36
CDC34YDR054C PPR1P07272 904 aaPredicted RBP6.57□□□□□ -1.36
CDC34YDR054C MOD5P07884 428 aa6.57□□□□□ -1.36
CDC34YDR054C STE6P12866 1290 aa6.57□□□□□ -1.36
CDC34YDR054C PUF4P25339 888 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
CDC34YDR054C APL1P27351 700 aa6.57□□□□□ -1.36
CDC34YDR054C MUD1P32605 298 aaKnown RBP6.57□□□□□ -1.36
CDC34YDR054C COT1P32798 439 aa6.57□□□□□ -1.36
CDC34YDR054C SMY2P32909 740 aaKnown RBP6.57□□□□□ -1.36
CDC34YDR054C HSP78P33416 811 aa6.57□□□□□ -1.36
CDC34YDR054C NIC96P34077 839 aa6.57□□□□□ -1.36
CDC34YDR054C GIP1P38229 639 aa6.57□□□□□ -1.36
CDC34YDR054C EXO84P38261 753 aa6.57□□□□□ -1.36
CDC34YDR054C EFM2P38347 419 aa6.57□□□□□ -1.36
CDC34YDR054C AIM46P38885 310 aa6.57□□□□□ -1.36
CDC34YDR054C DLD3P39976 496 aaKnown RBP6.57□□□□□ -1.36
CDC34YDR054C PSF2P40359 213 aa6.57□□□□□ -1.36
CDC34YDR054C SHQ1P40486 507 aaPredicted RBP6.57□□□□□ -1.36
CDC34YDR054C SKP2P42843 763 aa6.57□□□□□ -1.36
CDC34YDR054C SRB7P47822 140 aa6.57□□□□□ -1.36
CDC34YDR054C MDR1P53258 950 aa6.57□□□□□ -1.36
CDC34YDR054C ERG5P54781 538 aa6.57□□□□□ -1.36
CDC34YDR054C VTC3Q02725 835 aa6.57□□□□□ -1.36
CDC34YDR054C LCB5Q06147 687 aaKnown RBP6.57□□□□□ -1.36
CDC34YDR054C YCG1Q06680 1035 aa6.57□□□□□ -1.36
CDC34YDR054C PDC6P26263 563 aaKnown RBP6.56□□□□□ -1.36
CDC34YDR054C MLF3P32047 452 aa6.56□□□□□ -1.36
CDC34YDR054C PIN4P34217 668 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
CDC34YDR054C MGS1P40151 587 aa6.56□□□□□ -1.36
CDC34YDR054C SEC9P40357 651 aa6.56□□□□□ -1.36
CDC34YDR054C SEC26P41810 973 aaKnown RBP6.56□□□□□ -1.36
CDC34YDR054C ORC5P50874 479 aa6.56□□□□□ -1.36
CDC34YDR054C NCS6P53088 359 aa6.56□□□□□ -1.36
CDC34YDR054C YGL140CP53120 1219 aa6.56□□□□□ -1.36
CDC34YDR054C PEX13P80667 386 aa6.56□□□□□ -1.36
CDC34YDR054C MTQ2Q03920 221 aaPredicted RBP6.56□□□□□ -1.36
CDC34YDR054C VPS38Q05919 439 aa6.56□□□□□ -1.36
CDC34YDR054C MLC2Q06580 163 aa6.56□□□□□ -1.36
CDC34YDR054C SUT2Q12286 268 aa6.56□□□□□ -1.36
CDC34YDR054C ATG11Q12527 1178 aa6.56□□□□□ -1.36
CDC34YDR054C MTF2P10849 440 aa6.55□□□□□ -1.36
CDC34YDR054C UBC1P21734 215 aaKnown RBP6.55□□□□□ -1.36
CDC34YDR054C VBA3P25594 458 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms