RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C CEF1Q03654 590 aaPredicted RBP1.8□□□□□ -2.12
UFD2YDL190C ATG16Q03818 150 aa1.8□□□□□ -2.12
UFD2YDL190C YHM2Q04013 314 aa1.8□□□□□ -2.12
UFD2YDL190C PHM6Q05637 104 aa1.8□□□□□ -2.12
UFD2YDL190C PEX19Q07418 342 aa1.8□□□□□ -2.12
UFD2YDL190C YLR040CQ07988 224 aa1.8□□□□□ -2.12
UFD2YDL190C Q0142Q9ZZW4 58 aa1.8□□□□□ -2.12
UFD2YDL190C GAL1P04385 528 aa1.8□□□□□ -2.12
UFD2YDL190C HEM12P32347 362 aaPredicted RBP1.8□□□□□ -2.12
UFD2YDL190C NIC96P34077 839 aa1.8□□□□□ -2.12
UFD2YDL190C TRZ1P36159 838 aaPredicted RBP1.8□□□□□ -2.12
UFD2YDL190C KTR4P38131 464 aa1.8□□□□□ -2.12
UFD2YDL190C BIT2P38346 545 aa1.8□□□□□ -2.12
UFD2YDL190C HXT6P39003 570 aaKnown RBP1.8□□□□□ -2.12
UFD2YDL190C HXT7P39004 570 aa1.8□□□□□ -2.12
UFD2YDL190C BNA2P47125 453 aa1.8□□□□□ -2.12
UFD2YDL190C SPC105P53148 917 aa1.8□□□□□ -2.12
UFD2YDL190C UBX4P54730 416 aa1.8□□□□□ -2.12
UFD2YDL190C RPN7Q06103 429 aaKnown RBP1.8□□□□□ -2.12
UFD2YDL190C THI21Q08975 551 aa1.8□□□□□ -2.12
UFD2YDL190C YPR027CQ12079 277 aa1.8□□□□□ -2.12
UFD2YDL190C HAL9Q12180 1030 aa1.8□□□□□ -2.12
UFD2YDL190C SWM1Q12379 170 aa1.8□□□□□ -2.12
UFD2YDL190C RPS21BQ3E754 87 aaKnown RBP1.8□□□□□ -2.12
UFD2YDL190C YLR149CQ99296 730 aa1.8□□□□□ -2.12
UFD2YDL190C YOR1P53049 1477 aa1.8□□□□□ -2.12
UFD2YDL190C RPS21AP0C0V8 87 aaKnown RBP1.8□□□□□ -2.12
UFD2YDL190C PGI1P12709 554 aaKnown RBP1.8□□□□□ -2.12
UFD2YDL190C COX11P19516 300 aaKnown RBP1.8□□□□□ -2.12
UFD2YDL190C KCC4P25389 1037 aa1.8□□□□□ -2.12
UFD2YDL190C PTP2P29461 750 aa1.8□□□□□ -2.12
UFD2YDL190C ZIP2P53061 704 aa1.8□□□□□ -2.12
UFD2YDL190C PTA1Q01329 785 aaPredicted RBP1.8□□□□□ -2.12
UFD2YDL190C SKY1Q03656 742 aa1.8□□□□□ -2.12
UFD2YDL190C HFI1Q12060 488 aa1.8□□□□□ -2.12
UFD2YDL190C PDR10P51533 1564 aa1.8□□□□□ -2.12
UFD2YDL190C SNF2P22082 1703 aa1.79□□□□□ -2.12
UFD2YDL190C BNR1P40450 1375 aa1.79□□□□□ -2.12
UFD2YDL190C OAF3P36023 863 aa1.79□□□□□ -2.12
UFD2YDL190C EMP65P40085 556 aa1.79□□□□□ -2.12
UFD2YDL190C STU2P46675 888 aa1.79□□□□□ -2.12
UFD2YDL190C STB4P50104 949 aa1.79□□□□□ -2.12
UFD2YDL190C SLD3P53135 668 aa1.79□□□□□ -2.12
UFD2YDL190C YGR021WP53212 290 aa1.79□□□□□ -2.12
UFD2YDL190C DUS1P53759 423 aaKnown RBP1.79□□□□□ -2.12
UFD2YDL190C RNT1Q02555 471 aa1.79□□□□□ -2.12
UFD2YDL190C VTH1P40438 1549 aa1.79□□□□□ -2.12
UFD2YDL190C VTH2P40890 1549 aa1.79□□□□□ -2.12
UFD2YDL190C TRP4P07285 380 aaPredicted RBP1.79□□□□□ -2.12
UFD2YDL190C ALG7P07286 448 aa1.79□□□□□ -2.12
UFD2YDL190C HCA4P20448 770 aaKnown RBP1.79□□□□□ -2.12
UFD2YDL190C DPB3P27344 201 aa1.79□□□□□ -2.12
UFD2YDL190C SEC65P29478 273 aa1.79□□□□□ -2.12
UFD2YDL190C STE14P32584 239 aa1.79□□□□□ -2.12
UFD2YDL190C SER1P33330 395 aaKnown RBP1.79□□□□□ -2.12
UFD2YDL190C MNN4P36044 1178 aa1.79□□□□□ -2.12
UFD2YDL190C YKL133CP36066 463 aa1.79□□□□□ -2.12
UFD2YDL190C YKR018CP36114 725 aa1.79□□□□□ -2.12
UFD2YDL190C FAT1P38225 669 aa1.79□□□□□ -2.12
UFD2YDL190C RIM4P38741 713 aa1.79□□□□□ -2.12
UFD2YDL190C NAB3P38996 802 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
UFD2YDL190C IES5P40060 125 aa1.79□□□□□ -2.12
UFD2YDL190C RSC8P43609 557 aaKnown RBP1.79□□□□□ -2.12
UFD2YDL190C BFA1P47113 574 aa1.79□□□□□ -2.12
UFD2YDL190C PCL10P53124 433 aa1.79□□□□□ -2.12
UFD2YDL190C TIM44Q01852 431 aa1.79□□□□□ -2.12
UFD2YDL190C ECM38Q05902 660 aaPredicted RBP1.79□□□□□ -2.12
UFD2YDL190C MLC2Q06580 163 aa1.79□□□□□ -2.12
UFD2YDL190C YDL121CQ07541 149 aa1.79□□□□□ -2.12
UFD2YDL190C PEX15Q08215 383 aa1.79□□□□□ -2.12
UFD2YDL190C MCH5Q08777 521 aa1.79□□□□□ -2.12
UFD2YDL190C DCS2Q12123 353 aa1.79□□□□□ -2.12
UFD2YDL190C RRP6Q12149 733 aaKnown RBP1.79□□□□□ -2.12
UFD2YDL190C APM4Q99186 491 aa1.79□□□□□ -2.12
UFD2YDL190C SKI3P17883 1432 aaKnown RBP1.79□□□□□ -2.12
UFD2YDL190C MET3P08536 511 aa1.78□□□□□ -2.12
UFD2YDL190C SEC21P32074 935 aaKnown RBP1.78□□□□□ -2.12
UFD2YDL190C YKU70P32807 602 aa1.78□□□□□ -2.12
UFD2YDL190C MAL31P38156 614 aa1.78□□□□□ -2.12
UFD2YDL190C YML122CQ03207 126 aa1.78□□□□□ -2.12
UFD2YDL190C ACF2Q12168 779 aa1.78□□□□□ -2.12
UFD2YDL190C POL1P13382 1468 aa1.78□□□□□ -2.12
UFD2YDL190C FBP1P09201 348 aa1.78□□□□□ -2.12
UFD2YDL190C YKR075CP36155 307 aa1.78□□□□□ -2.12
UFD2YDL190C RRP8P38961 392 aaKnown RBP1.78□□□□□ -2.12
UFD2YDL190C SDP1P40479 209 aa1.78□□□□□ -2.12
UFD2YDL190C SSY5P47002 699 aa1.78□□□□□ -2.12
UFD2YDL190C YJR039WP47107 1121 aa1.78□□□□□ -2.12
UFD2YDL190C RNR4P49723 345 aaKnown RBP1.78□□□□□ -2.12
UFD2YDL190C TAN1P53072 289 aaPredicted RBP1.78□□□□□ -2.12
UFD2YDL190C ARP4P80428 489 aa1.78□□□□□ -2.12
UFD2YDL190C SWI6P09959 803 aa1.77□□□□□ -2.13
UFD2YDL190C MRS6P32864 603 aaKnown RBP1.77□□□□□ -2.13
UFD2YDL190C PTH2P34222 208 aa1.77□□□□□ -2.13
UFD2YDL190C SSZ1P38788 538 aaKnown RBP1.77□□□□□ -2.13
UFD2YDL190C YHR078WP38799 552 aa1.77□□□□□ -2.13
UFD2YDL190C CTF8P38877 133 aa1.77□□□□□ -2.13
UFD2YDL190C HIS6P40545 261 aa1.77□□□□□ -2.13
UFD2YDL190C FKH2P41813 862 aa1.77□□□□□ -2.13
UFD2YDL190C BUL1P48524 976 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms