RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C TPM1P17536 199 aaKnown RBP5.64□□□□□ -1.51
SCM3YDL139C RNQ1P25367 405 aa5.64□□□□□ -1.51
SCM3YDL139C HIR1P32479 840 aa5.64□□□□□ -1.51
SCM3YDL139C YKT6P36015 200 aaKnown RBP5.64□□□□□ -1.51
SCM3YDL139C SUL1P38359 859 aa5.64□□□□□ -1.51
SCM3YDL139C PTC7P38797 343 aa5.64□□□□□ -1.51
SCM3YDL139C NUP82P40368 713 aa5.64□□□□□ -1.51
SCM3YDL139C RET3P53600 189 aa5.64□□□□□ -1.51
SCM3YDL139C ALG12P53730 551 aa5.64□□□□□ -1.51
SCM3YDL139C YML037CQ03703 340 aa5.64□□□□□ -1.51
SCM3YDL139C EAF1Q06337 982 aa5.64□□□□□ -1.51
SCM3YDL139C ILV1P00927 576 aaKnown RBP5.63□□□□□ -1.51
SCM3YDL139C HSP60P19882 572 aaKnown RBP5.63□□□□□ -1.51
SCM3YDL139C MSM1P22438 575 aa5.63□□□□□ -1.51
SCM3YDL139C RRP43P25359 394 aaPredicted RBP5.63□□□□□ -1.51
SCM3YDL139C ARE1P25628 610 aa5.63□□□□□ -1.51
SCM3YDL139C BMH1P29311 267 aaKnown RBP5.63□□□□□ -1.51
SCM3YDL139C CDC11P32458 415 aa5.63□□□□□ -1.51
SCM3YDL139C SAC6P32599 642 aaKnown RBP5.63□□□□□ -1.51
SCM3YDL139C PHO88P38264 188 aaPredicted RBP5.63□□□□□ -1.51
SCM3YDL139C CCC2P38995 1004 aa5.63□□□□□ -1.51
SCM3YDL139C GTS1P40956 396 aa5.63□□□□□ -1.51
SCM3YDL139C THI6P41835 540 aa5.63□□□□□ -1.51
SCM3YDL139C ALR2P43553 858 aa5.63□□□□□ -1.51
SCM3YDL139C FMS1P50264 508 aa5.63□□□□□ -1.51
SCM3YDL139C ERP6P53198 216 aa5.63□□□□□ -1.51
SCM3YDL139C YDR278CQ05612 105 aa5.63□□□□□ -1.51
SCM3YDL139C DUS3Q06053 668 aaKnown RBP5.63□□□□□ -1.51
SCM3YDL139C SPP382Q06411 708 aaPredicted RBP5.63□□□□□ -1.51
SCM3YDL139C SLK19Q08581 821 aaKnown RBP5.63□□□□□ -1.51
SCM3YDL139C ERR1P0CX10 437 aa5.62□□□□□ -1.51
SCM3YDL139C ERR2P0CX11 437 aa5.62□□□□□ -1.51
SCM3YDL139C THR4P16120 514 aaKnown RBP5.62□□□□□ -1.51
SCM3YDL139C DAL7P21826 554 aa5.62□□□□□ -1.51
SCM3YDL139C DBP2P24783 546 aaKnown RBP5.62□□□□□ -1.51
SCM3YDL139C MIC60P36112 540 aa5.62□□□□□ -1.51
SCM3YDL139C SEC9P40357 651 aa5.62□□□□□ -1.51
SCM3YDL139C NIT1P40447 199 aa5.62□□□□□ -1.51
SCM3YDL139C YFL054CP43549 646 aa5.62□□□□□ -1.51
SCM3YDL139C UTP8P53276 713 aaKnown RBP5.62□□□□□ -1.51
SCM3YDL139C SDA1P53313 767 aaKnown RBP5.62□□□□□ -1.51
SCM3YDL139C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
SCM3YDL139C HRK1Q08732 759 aaKnown RBP5.62□□□□□ -1.51
SCM3YDL139C ARP6Q12509 438 aa5.62□□□□□ -1.51
SCM3YDL139C CAN1P04817 590 aa5.61□□□□□ -1.51
SCM3YDL139C RPL11AP0C0W9 174 aaKnown RBP5.61□□□□□ -1.51
SCM3YDL139C RAD18P10862 487 aa5.61□□□□□ -1.51
SCM3YDL139C GAL11P19659 1081 aa5.61□□□□□ -1.51
SCM3YDL139C RRP14P36080 434 aaKnown RBP5.61□□□□□ -1.51
SCM3YDL139C SPC42P36094 363 aa5.61□□□□□ -1.51
SCM3YDL139C PPS1P38148 807 aa5.61□□□□□ -1.51
SCM3YDL139C MIP6P38760 659 aaKnown RBP5.61□□□□□ -1.51
SCM3YDL139C TOM71P38825 639 aaKnown RBP5.61□□□□□ -1.51
SCM3YDL139C VPS45P38932 577 aa5.61□□□□□ -1.51
SCM3YDL139C CCT3P39077 534 aaKnown RBP5.61□□□□□ -1.51
SCM3YDL139C MXR1P40029 184 aa5.61□□□□□ -1.51
SCM3YDL139C ECL1P48235 211 aa5.61□□□□□ -1.51
SCM3YDL139C PGA2P53903 129 aa5.61□□□□□ -1.51
SCM3YDL139C EBS1Q03466 884 aaKnown RBP5.61□□□□□ -1.51
SCM3YDL139C YAP7Q08182 245 aa5.61□□□□□ -1.51
SCM3YDL139C RPL11BQ3E757 174 aaPredicted RBP5.61□□□□□ -1.51
SCM3YDL139C TOM1Q03280 3268 aa5.61□□□□□ -1.51
SCM3YDL139C MOT1P32333 1867 aa5.6□□□□□ -1.51
SCM3YDL139C SPO12P17123 173 aa5.6□□□□□ -1.51
SCM3YDL139C PRP9P19736 530 aaKnown RBP5.6□□□□□ -1.51
SCM3YDL139C MRC1P25588 1096 aa5.6□□□□□ -1.51
SCM3YDL139C HUL4P40985 892 aa5.6□□□□□ -1.51
SCM3YDL139C GPD2P41911 440 aaKnown RBP5.6□□□□□ -1.51
SCM3YDL139C NBP1P52919 319 aaPredicted RBP5.6□□□□□ -1.51
SCM3YDL139C RTA1P53047 317 aa5.6□□□□□ -1.51
SCM3YDL139C VIP1Q06685 1146 aaKnown RBP5.6□□□□□ -1.51
SCM3YDL139C YLR001CQ07895 862 aa5.6□□□□□ -1.51
SCM3YDL139C TLG2Q08144 397 aa5.6□□□□□ -1.51
SCM3YDL139C SIL1Q08199 421 aa5.6□□□□□ -1.51
SCM3YDL139C LAA1P39526 2014 aa5.6□□□□□ -1.51
SCM3YDL139C PHO8P11491 566 aa5.59□□□□□ -1.51
SCM3YDL139C PHO13P19881 312 aa5.59□□□□□ -1.51
SCM3YDL139C GAS1P22146 559 aaKnown RBP5.59□□□□□ -1.51
SCM3YDL139C UTR4P32626 227 aa5.59□□□□□ -1.51
SCM3YDL139C HBS1P32769 611 aaKnown RBP5.59□□□□□ -1.51
SCM3YDL139C YSC84P32793 468 aa5.59□□□□□ -1.51
SCM3YDL139C EBP2P36049 427 aaKnown RBP5.59□□□□□ -1.51
SCM3YDL139C YHL012WP38709 493 aa5.59□□□□□ -1.51
SCM3YDL139C RPN3P40016 523 aaKnown RBP5.59□□□□□ -1.51
SCM3YDL139C TOS3P43637 560 aa5.59□□□□□ -1.51
SCM3YDL139C CBK1P53894 756 aa5.59□□□□□ -1.51
SCM3YDL139C DOS2P54858 310 aa5.59□□□□□ -1.51
SCM3YDL139C YMR321CQ04898 105 aa5.59□□□□□ -1.51
SCM3YDL139C CRF1Q04930 467 aa5.59□□□□□ -1.51
SCM3YDL139C DUS4Q06063 367 aa5.59□□□□□ -1.51
SCM3YDL139C TIP41Q12199 356 aa5.59□□□□□ -1.51
SCM3YDL139C LPX1Q12405 387 aaKnown RBP5.59□□□□□ -1.51
SCM3YDL139C GSY1P23337 708 aa5.58□□□□□ -1.52
SCM3YDL139C BET3P36149 193 aa5.58□□□□□ -1.52
SCM3YDL139C ADE17P38009 592 aaKnown RBP5.58□□□□□ -1.52
SCM3YDL139C GGA2P38817 585 aaKnown RBP5.58□□□□□ -1.52
SCM3YDL139C IES1P43579 692 aa5.58□□□□□ -1.52
SCM3YDL139C ALG2P43636 503 aa5.58□□□□□ -1.52
SCM3YDL139C GUS1P46655 708 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
SCM3YDL139C VPS75P53853 264 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms