RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W DPH6Q12429 685 aa6.86□□□□□ -1.31
BDF2YDL070W TUB1P09733 447 aaKnown RBP6.85□□□□□ -1.31
BDF2YDL070W ATR1P13090 542 aa6.85□□□□□ -1.31
BDF2YDL070W DBP5P20449 482 aaKnown RBP6.85□□□□□ -1.31
BDF2YDL070W BUD23P25627 275 aaPredicted RBP6.85□□□□□ -1.31
BDF2YDL070W PEX2P32800 271 aa6.85□□□□□ -1.31
BDF2YDL070W PET112P33893 541 aa6.85□□□□□ -1.31
BDF2YDL070W TIF3P34167 436 aaKnown RBP6.85□□□□□ -1.31
BDF2YDL070W TGL4P36165 910 aa6.85□□□□□ -1.31
BDF2YDL070W PDX3P38075 228 aaKnown RBP6.85□□□□□ -1.31
BDF2YDL070W LAM5P43560 674 aa6.85□□□□□ -1.31
BDF2YDL070W RSM26P47141 266 aa6.85□□□□□ -1.31
BDF2YDL070W DAN4P47179 1161 aa6.85□□□□□ -1.31
BDF2YDL070W PIP2P52960 996 aa6.85□□□□□ -1.31
BDF2YDL070W YGR054WP53235 642 aaKnown RBP6.85□□□□□ -1.31
BDF2YDL070W DSL1P53847 754 aa6.85□□□□□ -1.31
BDF2YDL070W CIK1Q01649 594 aa6.85□□□□□ -1.31
BDF2YDL070W SEN54Q02825 467 aaPredicted RBP6.85□□□□□ -1.31
BDF2YDL070W CWC15Q03772 175 aaKnown RBP6.85□□□□□ -1.31
BDF2YDL070W ATG16Q03818 150 aa6.85□□□□□ -1.31
BDF2YDL070W GPR1Q12361 961 aa6.85□□□□□ -1.31
BDF2YDL070W YPR089WO13585 888 aa6.84□□□□□ -1.31
BDF2YDL070W SSC1P0CS90 654 aaKnown RBP6.84□□□□□ -1.31
BDF2YDL070W STE6P12866 1290 aa6.84□□□□□ -1.31
BDF2YDL070W PDC5P16467 563 aaKnown RBP6.84□□□□□ -1.31
BDF2YDL070W THR1P17423 357 aaKnown RBP6.84□□□□□ -1.31
BDF2YDL070W MSM1P22438 575 aa6.84□□□□□ -1.31
BDF2YDL070W RAD14P28519 371 aa6.84□□□□□ -1.31
BDF2YDL070W SEC21P32074 935 aaKnown RBP6.84□□□□□ -1.31
BDF2YDL070W RAD54P32863 898 aa6.84□□□□□ -1.31
BDF2YDL070W BCK2P33306 851 aa6.84□□□□□ -1.31
BDF2YDL070W STL1P39932 569 aa6.84□□□□□ -1.31
BDF2YDL070W NUP82P40368 713 aa6.84□□□□□ -1.31
BDF2YDL070W BNA3P47039 444 aaKnown RBP6.84□□□□□ -1.31
BDF2YDL070W YGL108CP53139 140 aa6.84□□□□□ -1.31
BDF2YDL070W ASI2P53895 289 aa6.84□□□□□ -1.31
BDF2YDL070W PGA2P53903 129 aa6.84□□□□□ -1.31
BDF2YDL070W IRC4Q03036 179 aa6.84□□□□□ -1.31
BDF2YDL070W BUL2Q03758 920 aaKnown RBP6.84□□□□□ -1.31
BDF2YDL070W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
BDF2YDL070W HSF1P10961 833 aa6.84□□□□□ -1.32
BDF2YDL070W MSS116P15424 664 aaKnown RBP6.84□□□□□ -1.32
BDF2YDL070W TEC1P18412 486 aa6.84□□□□□ -1.32
BDF2YDL070W RGR1P19263 1082 aa6.84□□□□□ -1.32
BDF2YDL070W URE2P23202 354 aaKnown RBP6.84□□□□□ -1.32
BDF2YDL070W KAR4P25583 335 aa6.84□□□□□ -1.32
BDF2YDL070W DUG2P38149 878 aa6.84□□□□□ -1.32
BDF2YDL070W SMF2P38778 549 aa6.84□□□□□ -1.32
BDF2YDL070W GAA1P39012 614 aa6.84□□□□□ -1.32
BDF2YDL070W YJL107CP42947 387 aa6.84□□□□□ -1.32
BDF2YDL070W PAN2P53010 1115 aaPredicted RBP6.84□□□□□ -1.32
BDF2YDL070W FMP30Q02883 468 aa6.84□□□□□ -1.32
BDF2YDL070W SNX3Q08826 162 aaKnown RBP6.84□□□□□ -1.32
BDF2YDL070W CDC33P07260 213 aaKnown RBP6.83□□□□□ -1.32
BDF2YDL070W CAF20P12962 161 aaKnown RBP6.83□□□□□ -1.32
BDF2YDL070W YSC84P32793 468 aa6.83□□□□□ -1.32
BDF2YDL070W SIP2P34164 415 aaKnown RBP6.83□□□□□ -1.32
BDF2YDL070W TPO5P36029 618 aa6.83□□□□□ -1.32
BDF2YDL070W FRT2P39734 528 aa6.83□□□□□ -1.32
BDF2YDL070W RIC1P40395 1056 aa6.83□□□□□ -1.32
BDF2YDL070W ASG1P40467 964 aa6.83□□□□□ -1.32
BDF2YDL070W FIG4P42837 879 aa6.83□□□□□ -1.32
BDF2YDL070W ROG3P43602 733 aa6.83□□□□□ -1.32
BDF2YDL070W YGL176CP46945 554 aa6.83□□□□□ -1.32
BDF2YDL070W BIO4P53630 237 aa6.83□□□□□ -1.32
BDF2YDL070W FOL1P53848 824 aa6.83□□□□□ -1.32
BDF2YDL070W KTR5P53966 522 aaPredicted RBP6.83□□□□□ -1.32
BDF2YDL070W MMT1Q03218 510 aa6.83□□□□□ -1.32
BDF2YDL070W ATG26Q06321 1198 aa6.83□□□□□ -1.32
BDF2YDL070W VAM6Q07468 1049 aa6.83□□□□□ -1.32
BDF2YDL070W YPL277CQ08989 487 aa6.83□□□□□ -1.32
BDF2YDL070W AIM7Q12156 149 aa6.83□□□□□ -1.32
BDF2YDL070W NTO1Q12311 748 aa6.83□□□□□ -1.32
BDF2YDL070W TY4B-PA0A0B7P3V8 1104 aa6.82□□□□□ -1.32
BDF2YDL070W GCN3P14741 305 aa6.82□□□□□ -1.32
BDF2YDL070W VPS34P22543 875 aa6.82□□□□□ -1.32
BDF2YDL070W LCB1P25045 558 aaKnown RBP6.82□□□□□ -1.32
BDF2YDL070W RPS5P26783 225 aaKnown RBP6.82□□□□□ -1.32
BDF2YDL070W YEL1P34225 687 aa6.82□□□□□ -1.32
BDF2YDL070W VMA22P38784 181 aa6.82□□□□□ -1.32
BDF2YDL070W PET100P38958 111 aa6.82□□□□□ -1.32
BDF2YDL070W UBP9P39967 754 aa6.82□□□□□ -1.32
BDF2YDL070W FMP32P43557 207 aa6.82□□□□□ -1.32
BDF2YDL070W YFH7P43591 353 aa6.82□□□□□ -1.32
BDF2YDL070W MRM2P53123 320 aa6.82□□□□□ -1.32
BDF2YDL070W UTP8P53276 713 aaKnown RBP6.82□□□□□ -1.32
BDF2YDL070W ESF2P53743 316 aaKnown RBP6.82□□□□□ -1.32
BDF2YDL070W GGA1Q06336 557 aa6.82□□□□□ -1.32
BDF2YDL070W TRE1Q08919 783 aa6.82□□□□□ -1.32
BDF2YDL070W GLE1Q12315 538 aa6.82□□□□□ -1.32
BDF2YDL070W SPE4Q12455 300 aa6.82□□□□□ -1.32
BDF2YDL070W HKR1P41809 1802 aa6.82□□□□□ -1.32
BDF2YDL070W ILS1P09436 1072 aaKnown RBP6.82□□□□□ -1.32
BDF2YDL070W HEM1P09950 548 aaPredicted RBP6.82□□□□□ -1.32
BDF2YDL070W CHS2P14180 963 aa6.82□□□□□ -1.32
BDF2YDL070W POL30P15873 258 aaKnown RBP6.82□□□□□ -1.32
BDF2YDL070W SFL1P20134 766 aa6.82□□□□□ -1.32
BDF2YDL070W AEP2P22136 580 aa6.82□□□□□ -1.32
BDF2YDL070W GFD2P25370 566 aaKnown RBP6.82□□□□□ -1.32
BDF2YDL070W RRN3P36070 627 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms