RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 NOLC1Q14978 699 aaKnown RBP eCLIP26.22■■□□□ 1.79
SPSB3-206ENST00000564709 ILDR1Q86SU0 546 aaPredicted RBP26.22■■□□□ 1.79
SPSB3-206ENST00000564709 GOLPH3LQ9H4A5 285 aa26.22■■□□□ 1.79
SPSB3-206ENST00000564709 CNNM1Q9NRU3 951 aa26.22■■□□□ 1.79
SPSB3-206ENST00000564709 PRC1O43663 620 aa26.22■■□□□ 1.79
SPSB3-206ENST00000564709 FDPSP14324 419 aaKnown RBP26.22■■□□□ 1.79
SPSB3-206ENST00000564709 SYTL4Q96C24 671 aaPredicted RBP26.22■■□□□ 1.79
SPSB3-206ENST00000564709 ZBTB1Q9Y2K1 713 aa26.22■■□□□ 1.79
SPSB3-206ENST00000564709 CTSWP56202 376 aa26.21■■□□□ 1.79
SPSB3-206ENST00000564709 OTUD7BQ6GQQ9 843 aa26.21■■□□□ 1.79
SPSB3-206ENST00000564709 CCAR1Q8IX12 1150 aaKnown RBP26.21■■□□□ 1.79
SPSB3-206ENST00000564709 NHSL1Q5SYE7 1610 aa26.21■■□□□ 1.79
SPSB3-206ENST00000564709 ANKRD36CQ5JPF3 1778 aa26.21■■□□□ 1.79
SPSB3-206ENST00000564709 LRP6O75581 1613 aa26.21■■□□□ 1.79
SPSB3-206ENST00000564709 RBM10P98175 930 aaKnown RBP26.21■■□□□ 1.79
SPSB3-206ENST00000564709 CDHR2Q9BYE9 1310 aa26.21■■□□□ 1.79
SPSB3-206ENST00000564709 RCOR1Q9UKL0 485 aa26.2■■□□□ 1.79
SPSB3-206ENST00000564709 KLF18A0A0U1RQI7 1052 aa26.2■■□□□ 1.78
SPSB3-206ENST00000564709 IRS4O14654 1257 aaPredicted RBP26.2■■□□□ 1.78
SPSB3-206ENST00000564709 CYP19A1P11511 503 aaPredicted RBP26.2■■□□□ 1.78
SPSB3-206ENST00000564709 MB21D2Q8IYB1 491 aaPredicted RBP26.2■■□□□ 1.78
SPSB3-206ENST00000564709 ANKRD18BA2A2Z9 1011 aa26.19■■□□□ 1.78
SPSB3-206ENST00000564709 GOLGA8BA8MQT2 603 aa26.19■■□□□ 1.78
SPSB3-206ENST00000564709 RRP9O43818 475 aaKnown RBP26.19■■□□□ 1.78
SPSB3-206ENST00000564709 ANTXR2P58335 489 aa26.19■■□□□ 1.78
SPSB3-206ENST00000564709 TRMT112Q9UI30 125 aaKnown RBP26.19■■□□□ 1.78
SPSB3-206ENST00000564709 PYCARDQ9ULZ3 195 aa26.19■■□□□ 1.78
SPSB3-206ENST00000564709 NUP98P52948 1817 aa26.19■■□□□ 1.78
SPSB3-206ENST00000564709 DENND2AQ9ULE3 1009 aa26.19■■□□□ 1.78
SPSB3-206ENST00000564709 ZNF165P49910 485 aa26.18■■□□□ 1.78
SPSB3-206ENST00000564709 TBC1D2BQ9UPU7 963 aa26.18■■□□□ 1.78
SPSB3-206ENST00000564709 ZNF396Q96N95 335 aaPredicted RBP26.17■■□□□ 1.78
SPSB3-206ENST00000564709 DDX60Q8IY21 1712 aaKnown RBP26.17■■□□□ 1.78
SPSB3-206ENST00000564709 ZNF213O14771 459 aa26.17■■□□□ 1.78
SPSB3-206ENST00000564709 RALYLQ86SE5 291 aaKnown RBP26.17■■□□□ 1.78
SPSB3-206ENST00000564709 PIH1D3Q9NQM4 214 aaKnown RBP26.17■■□□□ 1.78
SPSB3-206ENST00000564709 HPS5Q9UPZ3 1129 aa26.17■■□□□ 1.78
SPSB3-206ENST00000564709 BCL9O00512 1426 aa26.17■■□□□ 1.78
SPSB3-206ENST00000564709 A0A087WWV3 80 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 PTGS1P23219 599 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 ME1P48163 572 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 EVCP57679 992 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 SLC9C2Q5TAH2 1124 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 NCOA7Q8NI08 942 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 GJB4Q9NTQ9 266 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 ABCC12Q96J65 1359 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 IDH1O75874 414 aaKnown RBP26.16■■□□□ 1.78
SPSB3-206ENST00000564709 FBXL16Q8N461 479 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 VGLL2Q8N8G2 317 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 NKX2-3Q8TAU0 364 aa26.16■■□□□ 1.78
SPSB3-206ENST00000564709 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.16■■□□□ 1.782e-17■■■■■ 95.5
SPSB3-206ENST00000564709 ADD2P35612 726 aa26.15■■□□□ 1.78
SPSB3-206ENST00000564709 NBPF3Q9H094 633 aa26.15■■□□□ 1.78
SPSB3-206ENST00000564709 GOLGA6L6A8MZA4 724 aa26.15■■□□□ 1.78
SPSB3-206ENST00000564709 PHKA1P46020 1223 aa26.15■■□□□ 1.78
SPSB3-206ENST00000564709 CCDC73Q6ZRK6 1079 aa26.15■■□□□ 1.78
SPSB3-206ENST00000564709 C11orf57Q6ZUT1 292 aaPredicted RBP26.15■■□□□ 1.78
SPSB3-206ENST00000564709 HELBQ8NG08 1087 aaPredicted RBP26.15■■□□□ 1.78
SPSB3-206ENST00000564709 TDRD7Q8NHU6 1098 aaKnown RBP26.15■■□□□ 1.78
SPSB3-206ENST00000564709 TRIM5Q9C035 493 aa26.15■■□□□ 1.78
SPSB3-206ENST00000564709 UBN2Q6ZU65 1347 aa26.14■■□□□ 1.78
SPSB3-206ENST00000564709 SNW1Q13573 536 aaKnown RBP26.14■■□□□ 1.78
SPSB3-206ENST00000564709 FSIP1Q8NA03 581 aa26.14■■□□□ 1.78
SPSB3-206ENST00000564709 DRC7Q8IY82 874 aa26.14■■□□□ 1.77
SPSB3-206ENST00000564709 SPTLC3Q9NUV7 552 aa26.14■■□□□ 1.77
SPSB3-206ENST00000564709 DISP2A7MBM2 1401 aa26.13■■□□□ 1.77
SPSB3-206ENST00000564709 POLR3DP05423 398 aaPredicted RBP26.13■■□□□ 1.77
SPSB3-206ENST00000564709 ERCC4Q92889 916 aaPredicted RBP26.13■■□□□ 1.77
SPSB3-206ENST00000564709 C8orf76Q96K31 380 aa26.13■■□□□ 1.77
SPSB3-206ENST00000564709 FAM13BQ9NYF5 915 aa26.13■■□□□ 1.77
SPSB3-206ENST00000564709 ORC3Q9UBD5 711 aaPredicted RBP26.13■■□□□ 1.77
SPSB3-206ENST00000564709 TAOK2Q9UL54 1235 aa26.13■■□□□ 1.77
SPSB3-206ENST00000564709 APPP05067 770 aa26.13■■□□□ 1.77
SPSB3-206ENST00000564709 DZIP3Q86Y13 1208 aaKnown RBP26.13■■□□□ 1.77
SPSB3-206ENST00000564709 TBC1D10CQ8IV04 446 aa26.13■■□□□ 1.77
SPSB3-206ENST00000564709 KIAA1524Q8TCG1 905 aa26.13■■□□□ 1.77
SPSB3-206ENST00000564709 NRBP1Q9UHY1 535 aa26.13■■□□□ 1.77
SPSB3-206ENST00000564709 PDE8BO95263 885 aa26.12■■□□□ 1.77
SPSB3-206ENST00000564709 ZNF75DP51815 510 aa26.12■■□□□ 1.77
SPSB3-206ENST00000564709 CCDC102BQ68D86 513 aa26.12■■□□□ 1.77
SPSB3-206ENST00000564709 C4AP0C0L4 1744 aa26.12■■□□□ 1.77
SPSB3-206ENST00000564709 C4BP0C0L5 1744 aa26.12■■□□□ 1.77
SPSB3-206ENST00000564709 FAM177BA6PVY3 158 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 CPLX1O14810 134 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 KINO60870 393 aaKnown RBP26.11■■□□□ 1.77
SPSB3-206ENST00000564709 WWC3Q9ULE0 1092 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 ZNF532Q9HCE3 1301 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 A0A0G2JS52 829 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 PDE8AO60658 829 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 PLA2G4DQ86XP0 818 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 PCDHA7Q9UN72 937 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 CLIC4Q9Y696 253 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 SLIT2O94813 1529 aa26.11■■□□□ 1.77
SPSB3-206ENST00000564709 TPM3P06753 285 aa26.1■■□□□ 1.77
SPSB3-206ENST00000564709 FAM160A1Q05DH4 1040 aa26.1■■□□□ 1.77
SPSB3-206ENST00000564709 ATL3Q6DD88 541 aa26.1■■□□□ 1.77
SPSB3-206ENST00000564709 CCDC186Q7Z3E2 898 aa26.1■■□□□ 1.77
SPSB3-206ENST00000564709 ENGASEQ8NFI3 743 aa26.1■■□□□ 1.77
SPSB3-206ENST00000564709 SNAP23O00161 211 aa26.1■■□□□ 1.77
SPSB3-206ENST00000564709 RXRAP19793 462 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms