RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
LDLR-203ENST00000535915 RCOR1Q9UKL0 485 aa15.43■□□□□ 0.06
LDLR-203ENST00000535915 NHSL1Q5SYE7 1610 aa15.43■□□□□ 0.06
LDLR-203ENST00000535915 CDHR2Q9BYE9 1310 aa15.43■□□□□ 0.06
LDLR-203ENST00000535915 C17orf53Q8N3J3 647 aaPredicted RBP15.42■□□□□ 0.06
LDLR-203ENST00000535915 TTLL11Q8NHH1 800 aa15.42■□□□□ 0.06
LDLR-203ENST00000535915 USP28Q96RU2 1077 aa15.42■□□□□ 0.06
LDLR-203ENST00000535915 CNNM1Q9NRU3 951 aa15.42■□□□□ 0.06
LDLR-203ENST00000535915 RIPOR2Q9Y4F9 1068 aa15.42■□□□□ 0.06
LDLR-203ENST00000535915 ABCC12Q96J65 1359 aa15.42■□□□□ 0.06
LDLR-203ENST00000535915 CCAR1Q8IX12 1150 aaKnown RBP15.42■□□□□ 0.06
LDLR-203ENST00000535915 ANKRD18BA2A2Z9 1011 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 GPAA1O43292 621 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 PRC1O43663 620 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 TPM3P06753 285 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 FBXL16Q8N461 479 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.41■□□□□ 0.062e-9■■□□□ 12.3
LDLR-203ENST00000535915 DNAJC25Q9H1X3 360 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 MCAMP43121 646 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 ZNF165P49910 485 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 CTSWP56202 376 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 RALYLQ86SE5 291 aaKnown RBP15.41■□□□□ 0.06
LDLR-203ENST00000535915 DDX60Q8IY21 1712 aaKnown RBP15.41■□□□□ 0.06
LDLR-203ENST00000535915 ZNF213O14771 459 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 EVCP57679 992 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 ATL3Q6DD88 541 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 NCOA7Q8NI08 942 aa15.41■□□□□ 0.06
LDLR-203ENST00000535915 TRMT112Q9UI30 125 aaKnown RBP15.41■□□□□ 0.06
LDLR-203ENST00000535915 A0A0U1RQG5 324 aaPredicted RBP15.4■□□□□ 0.06
LDLR-203ENST00000535915 KLF18A0A0U1RQI7 1052 aa15.4■□□□□ 0.06
LDLR-203ENST00000535915 IRS4O14654 1257 aaPredicted RBP15.4■□□□□ 0.06
LDLR-203ENST00000535915 FDPSP14324 419 aaKnown RBP15.4■□□□□ 0.06
LDLR-203ENST00000535915 CCDC73Q6ZRK6 1079 aa15.4■□□□□ 0.06
LDLR-203ENST00000535915 LRP6O75581 1613 aa15.4■□□□□ 0.06
LDLR-203ENST00000535915 CYP19A1P11511 503 aaPredicted RBP15.4■□□□□ 0.06
LDLR-203ENST00000535915 ME1P48163 572 aa15.4■□□□□ 0.06
LDLR-203ENST00000535915 MB21D2Q8IYB1 491 aaPredicted RBP15.4■□□□□ 0.06
LDLR-203ENST00000535915 SYTL4Q96C24 671 aaPredicted RBP15.4■□□□□ 0.06
LDLR-203ENST00000535915 KCNF1Q9H3M0 494 aa15.4■□□□□ 0.06
LDLR-203ENST00000535915 GOLGA8BA8MQT2 603 aa15.39■□□□□ 0.05
LDLR-203ENST00000535915 ZSCAN25Q6NSZ9 544 aa15.39■□□□□ 0.05
LDLR-203ENST00000535915 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
LDLR-203ENST00000535915 GOLPH3LQ9H4A5 285 aa15.39■□□□□ 0.05
LDLR-203ENST00000535915 DHX16O60231 1041 aaKnown RBP15.39■□□□□ 0.05
LDLR-203ENST00000535915 SLC9C2Q5TAH2 1124 aa15.39■□□□□ 0.05
LDLR-203ENST00000535915 DRC7Q8IY82 874 aa15.39■□□□□ 0.05
LDLR-203ENST00000535915 TDRD7Q8NHU6 1098 aaKnown RBP15.39■□□□□ 0.05
LDLR-203ENST00000535915 SLC4A9Q96Q91 983 aa15.39■□□□□ 0.05
LDLR-203ENST00000535915 TRIM5Q9C035 493 aa15.39■□□□□ 0.05
LDLR-203ENST00000535915 ZBTB1Q9Y2K1 713 aa15.39■□□□□ 0.05
LDLR-203ENST00000535915 BCL9O00512 1426 aa15.38■□□□□ 0.05
LDLR-203ENST00000535915 CTAGE5O15320 804 aa15.38■□□□□ 0.05
LDLR-203ENST00000535915 RBM10P98175 930 aaKnown RBP15.38■□□□□ 0.05
LDLR-203ENST00000535915 RAB11FIP4Q86YS3 637 aa15.38■□□□□ 0.05
LDLR-203ENST00000535915 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.38■□□□□ 0.05
LDLR-203ENST00000535915 KINO60870 393 aaKnown RBP15.38■□□□□ 0.05
LDLR-203ENST00000535915 ADD2P35612 726 aa15.38■□□□□ 0.05
LDLR-203ENST00000535915 ANTXR2P58335 489 aa15.38■□□□□ 0.05
LDLR-203ENST00000535915 TTF1Q15361 905 aaPredicted RBP15.38■□□□□ 0.05
LDLR-203ENST00000535915 C8orf76Q96K31 380 aa15.38■□□□□ 0.05
LDLR-203ENST00000535915 SPTLC3Q9NUV7 552 aa15.38■□□□□ 0.05
LDLR-203ENST00000535915 CPLX1O14810 134 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 IDH1O75874 414 aaKnown RBP15.37■□□□□ 0.05
LDLR-203ENST00000535915 PDE8BO95263 885 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 CAVIN2O95810 425 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 OTUD7BQ6GQQ9 843 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 KIAA1524Q8TCG1 905 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 PYCARDQ9ULZ3 195 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 PDE8AO60658 829 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 PTGS1P23219 599 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 TRDNQ13061 729 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 SNW1Q13573 536 aaKnown RBP15.37■□□□□ 0.05
LDLR-203ENST00000535915 VGLL2Q8N8G2 317 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 FSIP1Q8NA03 581 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 ORC3Q9UBD5 711 aaPredicted RBP15.37■□□□□ 0.05
LDLR-203ENST00000535915 TBC1D2BQ9UPU7 963 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 HPS5Q9UPZ3 1129 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
LDLR-203ENST00000535915 APPP05067 770 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 FAM160A1Q05DH4 1040 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 ZNF512BQ96KM6 892 aaPredicted RBP15.36■□□□□ 0.05
LDLR-203ENST00000535915 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 PRDM4Q9UKN5 801 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 DYNC1I1O14576 645 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 ZNF75DP51815 510 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 PLA2G4DQ86XP0 818 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 DZIP3Q86Y13 1208 aaKnown RBP15.36■□□□□ 0.05
LDLR-203ENST00000535915 PIH1D3Q9NQM4 214 aaKnown RBP15.36■□□□□ 0.05
LDLR-203ENST00000535915 CHD4Q14839 1912 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 GOLGA6L19H0YKK7 550 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
LDLR-203ENST00000535915 STX1AQ16623 288 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 CCDC102BQ68D86 513 aa15.36■□□□□ 0.05
LDLR-203ENST00000535915 PHKA1P46020 1223 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 CCDC186Q7Z3E2 898 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 ENGASEQ8NFI3 743 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 RTEL1Q9NZ71 1219 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 PCDHA7Q9UN72 937 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 COL14A1Q05707 1796 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms