RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, human

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-214	ENST00000472398	KSR2	Q6VAB6	950 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	RASGRP2	Q7LDG7	609 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	NEK9	Q8TD19	979 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	SMARCC1	Q92922	1105 aa	Predicted RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	SKA1	Q96BD8	255 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	GPR101	Q96P66	508 aa	Predicted RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	MAP3K14	Q99558	947 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	DHX36	Q9H2U1	1008 aa	Known RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	SAGE1	Q9NXZ1	904 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	C9orf78	Q9NZ63	289 aa	Predicted RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	CNTN3	Q9P232	1028 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	RABL2A	Q9UBK7	228 aa	Predicted RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	PARP2	Q9UGN5	583 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	RBM19	Q9Y4C8	960 aa	Known RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	ORC4	O43929	436 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	NBPF7	P0C2Y1	421 aa	Predicted RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	NCAM1	P13591	858 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	ATF3	P18847	181 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	RBM5	P52756	815 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	PDE3B	Q13370	1112 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	ELOA	Q14241	798 aa	Known RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	TKFC	Q3LXA3	575 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	CRTC2	Q53ET0	693 aa	Predicted RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	UTP14C	Q5TAP6	766 aa	Known RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	CCDC73	Q6ZRK6	1079 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	MCM10	Q7L590	875 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	ELOA2	Q8IYF1	753 aa	Predicted RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	STAG2	Q8N3U4	1231 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	RNF34	Q969K3	372 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	3.87	□□□□□ -1.79	2e-6	■□□□□ 9.9
TTC3-214	ENST00000472398	PDCL3	Q9H2J4	239 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	SH3GLB2	Q9NR46	395 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	MRGBP	Q9NV56	204 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	EVA1B	Q9NVM1	165 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	DCAF16	Q9NXF7	216 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	ZNF69	Q9UC07	566 aa		3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	ZHX1	Q9UKY1	873 aa	Predicted RBP	3.87	□□□□□ -1.79
TTC3-214	ENST00000472398	KIF1C	O43896	1103 aa	Known RBP	3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	PRMT3	O60678	531 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	NBN	O60934	754 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	TPPP	O94811	219 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	BAIAP3	O94812	1187 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	ANP32A	P39687	249 aa	Known RBP	3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	UBA7	P41226	1012 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	CASP2	P42575	452 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	MASP1	P48740	699 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	MCL1	Q07820	350 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	MTMR3	Q13615	1198 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	SOGA3	Q5TF21	947 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	LVRN	Q6Q4G3	990 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	SLC4A10	Q6U841	1118 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	CCBE1	Q6UXH8	406 aa	Predicted RBP	3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	RASSF3	Q86WH2	238 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	DGKH	Q86XP1	1220 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	SMAP1	Q8IYB5	467 aa	Predicted RBP	3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	PNMA1	Q8ND90	353 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	EPS8L1	Q8TE68	723 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	3.86	□□□□□ -1.79	4e-8	■□□□□ 10.9
TTC3-214	ENST00000472398	ZNF396	Q96N95	335 aa	Predicted RBP	3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	INPP5F	Q9Y2H2	1132 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	IPP	Q9Y573	584 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	SNX2	O60749	519 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	CDC45	O75419	566 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	ABL1	P00519	1130 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	TPM2	P07951	284 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	CCNYL3	P0C7X3	344 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	TNFAIP3	P21580	790 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	SOX11	P35716	441 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	RAB27A	P51159	221 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	COPS2	P61201	443 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	ARHGAP4	P98171	946 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	NUCB1	Q02818	461 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	NR6A1	Q15406	480 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	SLC10A5	Q5PT55	438 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	AGAP9	Q5VTM2	703 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	CFAP161	Q6P656	301 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	MILR1	Q7Z6M3	343 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	ARL6IP6	Q8N6S5	226 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	TTC8	Q8TAM2	541 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	TRMT2B	Q96GJ1	504 aa	Known RBP	3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	MPP4	Q96JB8	637 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	AGAP3	Q96P47	875 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	POLR3C	Q9BUI4	534 aa	Predicted RBP	3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	OSBPL5	Q9H0X9	879 aa	Predicted RBP	3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	TRMT1	Q9NXH9	659 aa	Known RBP	3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	ZNF232	Q9UNY5	417 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	GPSM3	Q9Y4H4	160 aa		3.86	□□□□□ -1.79
TTC3-214	ENST00000472398	ESYT3	A0FGR9	886 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	TMEM110-MUSTN1	A8MSY1	372 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	GOLGA6L22	H0YM25	854 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	ELL2	O00472	640 aa	Predicted RBP	3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	TLL1	O43897	1013 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	BBOX1	O75936	387 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	AGR2	O95994	175 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	CCDC175	P0C221	793 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	PSMA3	P25788	255 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	ZNF76	P36508	570 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	KCNH2	Q12809	1159 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	HYI	Q5T013	277 aa		3.85	□□□□□ -1.79
TTC3-214	ENST00000472398	ANO1	Q5XXA6	986 aa		3.85	□□□□□ -1.79

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