RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 OTUD7BQ6GQQ9 843 aa23.53■■□□□ 1.36
EBF1-202ENST00000380654 KCNF1Q9H3M0 494 aa23.53■■□□□ 1.36
EBF1-202ENST00000380654 GOLPH3LQ9H4A5 285 aa23.53■■□□□ 1.36
EBF1-202ENST00000380654 TRMT112Q9UI30 125 aaKnown RBP23.53■■□□□ 1.36
EBF1-202ENST00000380654 RCOR1Q9UKL0 485 aa23.53■■□□□ 1.36
EBF1-202ENST00000380654 DENND2AQ9ULE3 1009 aa23.53■■□□□ 1.36
EBF1-202ENST00000380654 ANTXR2P58335 489 aa23.53■■□□□ 1.36
EBF1-202ENST00000380654 MB21D2Q8IYB1 491 aaPredicted RBP23.53■■□□□ 1.36
EBF1-202ENST00000380654 DNAJC25Q9H1X3 360 aa23.53■■□□□ 1.36
EBF1-202ENST00000380654 TBC1D2BQ9UPU7 963 aa23.53■■□□□ 1.36
EBF1-202ENST00000380654 KIF3AQ9Y496 699 aa23.53■■□□□ 1.36
EBF1-202ENST00000380654 LRP6O75581 1613 aa23.52■■□□□ 1.36
EBF1-202ENST00000380654 BCL9O00512 1426 aa23.52■■□□□ 1.36
EBF1-202ENST00000380654 ANKRD18BA2A2Z9 1011 aa23.52■■□□□ 1.36
EBF1-202ENST00000380654 NOLC1Q14978 699 aaKnown RBP eCLIP23.52■■□□□ 1.36
EBF1-202ENST00000380654 NUP98P52948 1817 aa23.52■■□□□ 1.36
EBF1-202ENST00000380654 UQCRHLA0A096LP55 91 aa23.51■■□□□ 1.35
EBF1-202ENST00000380654 UQCRHP07919 91 aa23.51■■□□□ 1.35
EBF1-202ENST00000380654 EVCP57679 992 aa23.51■■□□□ 1.35
EBF1-202ENST00000380654 SASS6Q6UVJ0 657 aa23.51■■□□□ 1.35
EBF1-202ENST00000380654 CCAR1Q8IX12 1150 aaKnown RBP23.51■■□□□ 1.35
EBF1-202ENST00000380654 VGLL2Q8N8G2 317 aa23.51■■□□□ 1.35
EBF1-202ENST00000380654 NKX2-3Q8TAU0 364 aa23.51■■□□□ 1.35
EBF1-202ENST00000380654 ANKRD36CQ5JPF3 1778 aa23.51■■□□□ 1.35
EBF1-202ENST00000380654 KLF18A0A0U1RQI7 1052 aa23.51■■□□□ 1.35
EBF1-202ENST00000380654 FBXL16Q8N461 479 aa23.51■■□□□ 1.35
EBF1-202ENST00000380654 HPS5Q9UPZ3 1129 aa23.5■■□□□ 1.35
EBF1-202ENST00000380654 ZNF213O14771 459 aa23.5■■□□□ 1.35
EBF1-202ENST00000380654 HSP90AA2PQ14568 343 aaPredicted RBP23.5■■□□□ 1.35
EBF1-202ENST00000380654 DNTTIP2Q5QJE6 756 aaKnown RBP23.5■■□□□ 1.35
EBF1-202ENST00000380654 SLC9C2Q5TAH2 1124 aa23.5■■□□□ 1.35
EBF1-202ENST00000380654 NBPF3Q9H094 633 aa23.5■■□□□ 1.35
EBF1-202ENST00000380654 PIH1D3Q9NQM4 214 aaKnown RBP23.5■■□□□ 1.35
EBF1-202ENST00000380654 GJB4Q9NTQ9 266 aa23.5■■□□□ 1.35
EBF1-202ENST00000380654 UBN2Q6ZU65 1347 aa23.5■■□□□ 1.35
EBF1-202ENST00000380654 DISP2A7MBM2 1401 aa23.49■■□□□ 1.35
EBF1-202ENST00000380654 GOLGA8BA8MQT2 603 aa23.49■■□□□ 1.35
EBF1-202ENST00000380654 HELBQ8NG08 1087 aaPredicted RBP23.49■■□□□ 1.35
EBF1-202ENST00000380654 ABCC12Q96J65 1359 aa23.49■■□□□ 1.35
EBF1-202ENST00000380654 ADD2P35612 726 aa23.49■■□□□ 1.35
EBF1-202ENST00000380654 PHKA1P46020 1223 aa23.49■■□□□ 1.35
EBF1-202ENST00000380654 ZNF165P49910 485 aa23.49■■□□□ 1.35
EBF1-202ENST00000380654 SNW1Q13573 536 aaKnown RBP23.49■■□□□ 1.35
EBF1-202ENST00000380654 PYCARDQ9ULZ3 195 aa23.49■■□□□ 1.35
EBF1-202ENST00000380654 IDH1O75874 414 aaKnown RBP23.48■■□□□ 1.35
EBF1-202ENST00000380654 NCOA7Q8NI08 942 aa23.48■■□□□ 1.35
EBF1-202ENST00000380654 DDX60Q8IY21 1712 aaKnown RBP23.48■■□□□ 1.35
EBF1-202ENST00000380654 A0A087WWV3 80 aa23.48■■□□□ 1.35
EBF1-202ENST00000380654 PDE8BO95263 885 aa23.48■■□□□ 1.35
EBF1-202ENST00000380654 RBM10P98175 930 aaKnown RBP23.48■■□□□ 1.35
EBF1-202ENST00000380654 RALYLQ86SE5 291 aaKnown RBP23.48■■□□□ 1.35
EBF1-202ENST00000380654 ZNF396Q96N95 335 aaPredicted RBP23.48■■□□□ 1.35
EBF1-202ENST00000380654 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.48■■□□□ 1.35
EBF1-202ENST00000380654 ME1P48163 572 aa23.47■■□□□ 1.35
EBF1-202ENST00000380654 DZIP3Q86Y13 1208 aaKnown RBP23.47■■□□□ 1.35
EBF1-202ENST00000380654 CCDC102BQ68D86 513 aa23.47■■□□□ 1.35
EBF1-202ENST00000380654 SLIT2O94813 1529 aa23.46■■□□□ 1.35
EBF1-202ENST00000380654 SNAP23O00161 211 aa23.46■■□□□ 1.35
EBF1-202ENST00000380654 PDE8AO60658 829 aa23.46■■□□□ 1.35
EBF1-202ENST00000380654 RRP9O43818 475 aaKnown RBP23.45■■□□□ 1.35
EBF1-202ENST00000380654 POLR3DP05423 398 aaPredicted RBP23.45■■□□□ 1.35
EBF1-202ENST00000380654 PTGS1P23219 599 aa23.45■■□□□ 1.35
EBF1-202ENST00000380654 C11orf57Q6ZUT1 292 aaPredicted RBP23.45■■□□□ 1.35
EBF1-202ENST00000380654 TBC1D10CQ8IV04 446 aa23.45■■□□□ 1.35
EBF1-202ENST00000380654 TDRD7Q8NHU6 1098 aaKnown RBP23.45■■□□□ 1.35
EBF1-202ENST00000380654 WWC3Q9ULE0 1092 aa23.45■■□□□ 1.35
EBF1-202ENST00000380654 ZNF532Q9HCE3 1301 aa23.45■■□□□ 1.34
EBF1-202ENST00000380654 ERCC4Q92889 916 aaPredicted RBP23.45■■□□□ 1.34
EBF1-202ENST00000380654 ORC3Q9UBD5 711 aaPredicted RBP23.45■■□□□ 1.34
EBF1-202ENST00000380654 FAM177BA6PVY3 158 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 APPP05067 770 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 CCDC73Q6ZRK6 1079 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 FSIP1Q8NA03 581 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 ENGASEQ8NFI3 743 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 C8orf76Q96K31 380 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 TRIM5Q9C035 493 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 SPTLC3Q9NUV7 552 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 NRBP1Q9UHY1 535 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 EXOC5O00471 708 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 KIAA1524Q8TCG1 905 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 PCDHA7Q9UN72 937 aa23.44■■□□□ 1.34
EBF1-202ENST00000380654 ATL3Q6DD88 541 aa23.43■■□□□ 1.34
EBF1-202ENST00000380654 CYB5R4Q7L1T6 521 aa23.43■■□□□ 1.34
EBF1-202ENST00000380654 ZNF512BQ96KM6 892 aaPredicted RBP23.43■■□□□ 1.34
EBF1-202ENST00000380654 CLIC4Q9Y696 253 aa23.43■■□□□ 1.34
EBF1-202ENST00000380654 A0A0G2JS52 829 aa23.43■■□□□ 1.34
EBF1-202ENST00000380654 RXRAP19793 462 aa23.43■■□□□ 1.34
EBF1-202ENST00000380654 ZNF75DP51815 510 aa23.43■■□□□ 1.34
EBF1-202ENST00000380654 ZSCAN25Q6NSZ9 544 aa23.43■■□□□ 1.34
EBF1-202ENST00000380654 PLA2G4DQ86XP0 818 aa23.43■■□□□ 1.34
EBF1-202ENST00000380654 GOLGA6L6A8MZA4 724 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 CPLX1O14810 134 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 PDE6AP16499 860 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 FAM160A1Q05DH4 1040 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 FBXO18Q8NFZ0 1043 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 TAOK2Q9UL54 1235 aa23.42■■□□□ 1.34
EBF1-202ENST00000380654 KINO60870 393 aaKnown RBP23.42■■□□□ 1.34
EBF1-202ENST00000380654 IL6STP40189 918 aaPredicted RBP23.42■■□□□ 1.34
EBF1-202ENST00000380654 TTF1Q15361 905 aaPredicted RBP23.42■■□□□ 1.34
EBF1-202ENST00000380654 CCDC186Q7Z3E2 898 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms