RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 GKAP1Q5VSY0 366 aaPredicted RBP15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 IFT20Q8IY31 132 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 CBX8Q9HC52 389 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 PDE4BQ07343 736 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 RUFY4Q6ZNE9 571 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 A0A1B0GVL5 298 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 RPAINQ86UA6 219 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 TMOD2Q9NZR1 351 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 EMILIN1Q9Y6C2 1016 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 DAPK1P53355 1430 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 NAIPQ13075 1403 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 PTPDC1A2A3K4 754 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 CCT6AP40227 531 aaKnown RBP15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 ZNF131P52739 623 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 ERMNQ8TAM6 284 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 PABPN1LA6NDY0 278 aaKnown RBP15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 E7EVH7 732 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 DMTNQ08495 405 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 BRAPQ7Z569 592 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 KRT23Q9C075 422 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 PIK3R4Q99570 1358 aa15.1■□□□□ 0.01
CCDC144A-203ENST00000360495 MCMDC2Q4G0Z9 681 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 USP26Q9BXU7 913 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 IMPACTQ9P2X3 320 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 PDE1CQ14123 709 aaPredicted RBP15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 CYP26C1Q6V0L0 522 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 RNF10Q8N5U6 811 aaKnown RBP15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 NDC80O14777 642 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 FANCCQ00597 558 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 TACO1Q9BSH4 297 aaKnown RBP15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 CLSTN2Q9H4D0 955 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 ZNF500O60304 480 aaPredicted RBP15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 TMTC2Q8N394 836 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 TTC16Q8NEE8 873 aa15.09■□□□□ 0.01
CCDC144A-203ENST00000360495 ELP1O95163 1332 aa15.08■□□□□ 0.01
CCDC144A-203ENST00000360495 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0.01
CCDC144A-203ENST00000360495 PTCD1O75127 700 aaKnown RBP15.08■□□□□ 0.01
CCDC144A-203ENST00000360495 PPARDQ03181 441 aa15.08■□□□□ 0.01
CCDC144A-203ENST00000360495 USP37Q86T82 979 aa15.08■□□□□ 0.01
CCDC144A-203ENST00000360495 NUDT16Q96DE0 195 aaKnown RBP15.08■□□□□ 0.01
CCDC144A-203ENST00000360495 BICD1Q96G01 975 aa15.08■□□□□ 0.01
CCDC144A-203ENST00000360495 PI4KAP2A4QPH2 592 aa15.08■□□□□ 0
CCDC144A-203ENST00000360495 NMIQ13287 307 aaPredicted RBP15.08■□□□□ 0
CCDC144A-203ENST00000360495 TRIM14Q14142 442 aa15.08■□□□□ 0
CCDC144A-203ENST00000360495 SEL1L2Q5TEA6 688 aa15.08■□□□□ 0
CCDC144A-203ENST00000360495 SND1Q7KZF4 910 aaKnown RBP eCLIP15.08■□□□□ 0
CCDC144A-203ENST00000360495 PI4KAP1Q8N8J0 262 aa15.08■□□□□ 0
CCDC144A-203ENST00000360495 GBP5Q96PP8 586 aa15.08■□□□□ 0
CCDC144A-203ENST00000360495 ATL3Q6DD88 541 aa15.08■□□□□ 0
CCDC144A-203ENST00000360495 TXNDC16Q9P2K2 825 aa15.08■□□□□ 0
CCDC144A-203ENST00000360495 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
CCDC144A-203ENST00000360495 RUFY3Q7L099 469 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 PHLDB2Q86SQ0 1253 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 SSX2IPQ9Y2D8 614 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 SAMM50Q9Y512 469 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 ARHGAP6O43182 974 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 ACTN4O43707 911 aaKnown RBP15.07■□□□□ 0
CCDC144A-203ENST00000360495 APOBRQ0VD83 1088 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 GPR161Q8N6U8 529 aaKnown RBP15.07■□□□□ 0
CCDC144A-203ENST00000360495 PEX19P40855 299 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 RNASE9P60153 205 aaKnown RBP15.07■□□□□ 0
CCDC144A-203ENST00000360495 CREB3L3Q68CJ9 461 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 SMC1BQ8NDV3 1235 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 TIAM1Q13009 1591 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 ARHGAP24Q8N264 748 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 CNNM2Q9H8M5 875 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
CCDC144A-203ENST00000360495 TXNDC9O14530 226 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 PPFIA4O75335 1185 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 LIG3P49916 1009 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 IFIT1BQ5T764 474 aaKnown RBP15.06■□□□□ 0
CCDC144A-203ENST00000360495 TRMT112Q9UI30 125 aaKnown RBP15.06■□□□□ 0
CCDC144A-203ENST00000360495 UTP11Q9Y3A2 253 aaKnown RBP15.06■□□□□ 0
CCDC144A-203ENST00000360495 HMGXB3Q12766 1538 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 PAK2Q13177 524 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 BRD3Q15059 726 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 UAP1Q16222 522 aaPredicted RBP15.06■□□□□ 0
CCDC144A-203ENST00000360495 CCDC62Q6P9F0 684 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 NME9Q86XW9 330 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 RABGAP1Q9Y3P9 1069 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 RIPOR2Q9Y4F9 1068 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 HSPA1LP34931 641 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 GNGT1P63211 74 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 ERCC6LQ2NKX8 1250 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 TAOK1Q7L7X3 1001 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.06■□□□□ 0
CCDC144A-203ENST00000360495 FAM83GA6ND36 823 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 SF3A3Q12874 501 aaKnown RBP eCLIP15.06■□□□□ 0
CCDC144A-203ENST00000360495 CEP128Q6ZU80 1094 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 USHBP1Q8N6Y0 703 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 GOLGA5Q8TBA6 731 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 CTNND2Q9UQB3 1225 aa15.06■□□□□ 0
CCDC144A-203ENST00000360495 ZNF365Q70YC5 407 aa15.05■□□□□ 0
CCDC144A-203ENST00000360495 UBE3BQ7Z3V4 1068 aa15.05■□□□□ 0
CCDC144A-203ENST00000360495 HEATR3Q7Z4Q2 680 aa15.05■□□□□ 0
CCDC144A-203ENST00000360495 SECISBP2LQ93073 1101 aaKnown RBP15.05■□□□□ 0
CCDC144A-203ENST00000360495 VPS16Q9H269 839 aa15.05■□□□□ 0
CCDC144A-203ENST00000360495 MCM7P33993 719 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms