RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 KRT79Q5XKE5 535 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 RSPH3Q86UC2 560 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 POLR2BP30876 1174 aaKnown RBP8.39□□□□□ -1.07
MED28-201ENST00000237380 GPR162Q16538 588 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 AKAP4Q5JQC9 854 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 CCDC102BQ68D86 513 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 ANKRD13DQ6ZTN6 518 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 GPR161Q8N6U8 529 aaKnown RBP8.39□□□□□ -1.07
MED28-201ENST00000237380 ANKS4BQ8N8V4 417 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 SPAG5Q96R06 1193 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 EDEM3Q9BZQ6 932 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 ZNF219Q9P2Y4 722 aaPredicted RBP8.39□□□□□ -1.07
MED28-201ENST00000237380 PPP2R5BQ15173 497 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 STX1AQ16623 288 aa8.39□□□□□ -1.07
MED28-201ENST00000237380 BACH1O14867 736 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 CCT6AP40227 531 aaKnown RBP8.38□□□□□ -1.07
MED28-201ENST00000237380 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 ATF7P17544 494 aaPredicted RBP8.38□□□□□ -1.07
MED28-201ENST00000237380 PLCB4Q15147 1175 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 SCAF11Q99590 1463 aaKnown RBP8.38□□□□□ -1.07
MED28-201ENST00000237380 NAPAP54920 295 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 TAOK1Q7L7X3 1001 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 CNBD1Q8NA66 436 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 TUBBP07437 444 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 OTUD6AQ7L8S5 288 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 USP48Q86UV5 1035 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 CCNA1P78396 465 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 ZBTB16Q05516 673 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 RTN1Q16799 776 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
MED28-201ENST00000237380 SMCR8Q8TEV9 937 aaPredicted RBP8.38□□□□□ -1.07
MED28-201ENST00000237380 LIMCH1Q9UPQ0 1083 aa8.38□□□□□ -1.07
MED28-201ENST00000237380 IRX3P78415 501 aaPredicted RBP8.37□□□□□ -1.07
MED28-201ENST00000237380 GNPTABQ3T906 1256 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 CROCCP2Q86T23 111 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 SLC17A8Q8NDX2 589 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 SLC8A2Q9UPR5 921 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 TNNQ9UQP3 1299 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 MAP3K2Q9Y2U5 619 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 BACH2Q9BYV9 841 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 PFDN4Q9NQP4 134 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 ZBTB43O43298 467 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 GSTA5Q7RTV2 222 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 NUP160Q12769 1436 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 RRP9O43818 475 aaKnown RBP8.37□□□□□ -1.07
MED28-201ENST00000237380 IDEP14735 1019 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 CYP7A1P22680 504 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 KRT83P78385 493 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 KDM5BQ9UGL1 1544 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 TRPC3Q13507 836 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 DCPSQ96C86 337 aaKnown RBP8.37□□□□□ -1.07
MED28-201ENST00000237380 BOLA2Q9H3K6 86 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 ECHDC1Q9NTX5 307 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 DYNC1I1O14576 645 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 XPOTO43592 962 aaKnown RBP8.37□□□□□ -1.07
MED28-201ENST00000237380 HLTFQ14527 1009 aaKnown RBP eCLIP8.37□□□□□ -1.07
MED28-201ENST00000237380 DZIP3Q86Y13 1208 aaKnown RBP8.37□□□□□ -1.07
MED28-201ENST00000237380 PTPN14Q15678 1187 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 ATP2B3Q16720 1220 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 LIN9Q5TKA1 542 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 ATL3Q6DD88 541 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 RNF34Q969K3 372 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 ARHGEF11O15085 1522 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 SH2D4BQ5SQS7 431 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 CALUO43852 315 aaPredicted RBP8.37□□□□□ -1.07
MED28-201ENST00000237380 XRCC6P12956 609 aaKnown RBP eCLIP8.37□□□□□ -1.07
MED28-201ENST00000237380 CCDC144CPQ8IYA2 1237 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 FAM193BQ96PV7 902 aaPredicted RBP8.37□□□□□ -1.07
MED28-201ENST00000237380 BABAM1Q9NWV8 329 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 GJA3Q9Y6H8 435 aa8.37□□□□□ -1.07
MED28-201ENST00000237380 YEATS2Q9ULM3 1422 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 WDR17Q8IZU2 1322 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 HSF2BPO75031 334 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 KIFC2Q96AC6 838 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 ALDH1L1O75891 902 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 EPB41P11171 864 aaKnown RBP8.36□□□□□ -1.07
MED28-201ENST00000237380 SND1Q7KZF4 910 aaKnown RBP eCLIP8.36□□□□□ -1.07
MED28-201ENST00000237380 CCPG1Q9ULG6 757 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 DAPK3O43293 454 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 HS1BP3Q53T59 392 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 VAT1LQ9HCJ6 419 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 ATP6V1E1P36543 226 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 IPO11Q9UI26 975 aaKnown RBP8.36□□□□□ -1.07
MED28-201ENST00000237380 MAP3K7O43318 606 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 BCAR3O75815 825 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 PRPF4BQ13523 1007 aaKnown RBP8.36□□□□□ -1.07
MED28-201ENST00000237380 TTC1Q99614 292 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 TRIM7Q9C029 511 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 GPTP24298 496 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 DCAF5Q96JK2 942 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 NEK1Q96PY6 1258 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 CFAP65Q6ZU64 1925 aaKnown RBP8.36□□□□□ -1.07
MED28-201ENST00000237380 KRT2P35908 639 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 JPH2Q9BR39 696 aaPredicted RBP8.36□□□□□ -1.07
MED28-201ENST00000237380 STIM2Q9P246 746 aa8.36□□□□□ -1.07
MED28-201ENST00000237380 RILPL1Q5EBL4 403 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 NLRX1Q86UT6 975 aa8.35□□□□□ -1.07
MED28-201ENST00000237380 GGA1Q9UJY5 639 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms