RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Dhx16G3X8X0 1044 aaKnown RBP8.91□□□□□ -0.98
Usp40-204ENSMUST00000187758 Rsph3aQ3UFY4 516 aa8.91□□□□□ -0.98
Usp40-204ENSMUST00000187758 Htatsf1Q8BGC0 757 aa8.91□□□□□ -0.98
Usp40-204ENSMUST00000187758 Csrnp1P59054 583 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Fhdc1Q3ULZ2 1149 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Prom2Q3UUY6 835 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Hand2Q61039 217 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Agtpbp1Q641K1 1218 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Cyp24a1Q64441 514 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Ppm1fQ8CGA0 452 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Cdca7lQ922M5 438 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 EvplQ9D952 2035 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Bend4P86174 541 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 RubcnlQ3TD16 648 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Usp44Q8C2S0 711 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Ccdc158Q8CDI6 1109 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 IcoslgQ9JHJ8 322 aa8.9□□□□□ -0.98
Usp40-204ENSMUST00000187758 Atp6v1aP50516 617 aaKnown RBP8.9□□□□□ -0.99
Usp40-204ENSMUST00000187758 Ccdc51Q3URS9 406 aa8.9□□□□□ -0.99
Usp40-204ENSMUST00000187758 Pof1bQ8K4L4 587 aa8.9□□□□□ -0.99
Usp40-204ENSMUST00000187758 Tceanc2Q8R2M0 207 aa8.9□□□□□ -0.99
Usp40-204ENSMUST00000187758 Ttc5Q99LG4 440 aa8.9□□□□□ -0.99
Usp40-204ENSMUST00000187758 Sept12Q9D451 317 aa8.9□□□□□ -0.99
Usp40-204ENSMUST00000187758 Tbc1d8Q9Z1A9 1134 aa8.9□□□□□ -0.99
Usp40-204ENSMUST00000187758 NapbP28663 298 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Ercc3P49135 783 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 ErfeQ6PGN1 340 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Rps6kb1Q8BSK8 525 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Slc4a4O88343 1079 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Gnat2P50149 354 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Krt40Q6IFX3 439 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Tango6Q8C3S2 1079 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Ccdc7Q9D541 371 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Trpc5Q9QX29 975 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Myh7Q91Z83 1935 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 F2rP30558 430 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Best3Q6H1V1 669 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Phrf1A6H619 1682 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Myh15E9Q264 1925 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Myh4Q5SX39 1939 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Sik3Q6P4S6 1311 aa8.89□□□□□ -0.99
Usp40-204ENSMUST00000187758 Vwa3bJ9JI28 736 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Cyp2d9P11714 504 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Kif22Q3V300 660 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Ddx19aQ61655 478 aaKnown RBP8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 St18Q80TY4 1045 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 IarsQ8BU30 1262 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Trmt44Q9D2Q2 713 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Myh3P13541 1940 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Togaram1Q6A070 1776 aaKnown RBP8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Krt24A1L317 512 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Kcnb2A6H8H5 907 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Cfap70D3YVL2 1141 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Kif20aP97329 887 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Zkscan1Q8BGS3 561 aaKnown RBP8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Cxcl11Q9JHH5 100 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Carmil3Q3UFQ8 1375 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Usp42B2RQC2 1324 aaKnown RBP8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Pet2A2AHY8 747 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 1700006A11RikB9EHI3 544 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Lmnb1P14733 588 aaKnown RBP8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Terf1P70371 421 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Gm21985Q6P6P5 1106 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Cnot6lQ8VEG6 555 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Frmd7A2AD83 703 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Alx1Q8C8B0 326 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Tubb6Q922F4 447 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Rufy3Q9D394 469 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Odf2lQ9D478 642 aa8.88□□□□□ -0.99
Usp40-204ENSMUST00000187758 Col20a1Q923P0 1320 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 WdpcpQ8C456 722 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Rbm43Q99J64 343 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Krt84Q99M73 603 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Pold4Q9CWP8 107 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Olfr247E9PVJ7 320 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Olfr819K7N727 320 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Pkp1P97350 728 aaKnown RBP8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Ehmt1Q5DW34 1296 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Cdcp1Q5U462 833 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Ciapin1Q8WTY4 309 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Gtf2a1Q99PM3 378 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Znf18Q810A1 556 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Pdzph1Q8BGR1 1238 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Tmem179Q8BHH9 233 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Iffo2Q8R2V2 512 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 PtmsQ9D0J8 101 aaKnown RBP8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Stag1Q9D3E6 1258 aa8.87□□□□□ -0.99
Usp40-204ENSMUST00000187758 Kifc2O08672 792 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Chrna5Q2MKA5 467 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Cyp2c67Q569X9 491 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Atad2Q8CDM1 1040 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Smc3Q9CW03 1217 aaKnown RBP8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Myoz2Q9JJW5 264 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Dennd3A2RT67 1274 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Syt1P46096 421 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Dynll1P63168 89 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Fsd2Q8BZ52 692 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Kcnq3Q8K3F6 873 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Nup188Q6ZQH8 1759 aa8.86□□□□□ -0.99
Usp40-204ENSMUST00000187758 Ythdc1E9Q5K9 736 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 140.5 ms