RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Rdm1Q9CQK3 281 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Speer4bQ9D9F7 267 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Magi2Q9WVQ1 1275 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Ric1Q69ZJ7 1422 aa20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Siglec1Q62230 1695 aa20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Cers3Q1A3B0 383 aa20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Asap2Q7SIG6 958 aa20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Acot9Q9R0X4 439 aaKnown RBP20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Rgs12Q8CGE9 1381 aa20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Serpinb6bO08804 377 aa20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Slc1a4O35874 532 aa20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Fam114a1Q9D281 569 aa20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Telo2Q9DC40 840 aaKnown RBP20.17■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Slit1Q80TR4 1531 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Slc5a1Q8C3K6 665 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Farp2Q91VS8 1065 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Acsbg1Q99PU5 721 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Grin2dQ03391 1323 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Npc1l1Q6T3U4 1333 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Pald1P70261 859 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Prdm1Q60636 856 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Znf532Q6NXK2 1036 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Fam102bQ8BQS4 339 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Tmem87aQ8BXN9 555 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Gigyf1Q99MR1 1044 aaKnown RBP20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Tbc1d7Q9D0K0 293 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Ltb4r2Q9JJL9 360 aa20.16■□□□□ 0.82
Ckap4-202ENSMUST00000167671 LtkP08923 888 aa20.15■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Fsd2Q8BZ52 692 aa20.15■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Ankib1Q6ZPS6 1085 aa20.15■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Sil1Q9EPK6 465 aa20.15■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Gm43638A0A0J9YU36 694 aa20.14■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Tmem266Q8BZB3 538 aa20.14■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Col4a1P02463 1669 aa20.14■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Jakmip2D3YXK0 820 aa20.14■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Prl3d2F6R3P9 224 aa20.14■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Gm28047Q3US59 414 aa20.14■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Smc4Q8CG47 1286 aa20.14■□□□□ 0.81
Ckap4-202ENSMUST00000167671 CerkQ8K4Q7 531 aa20.14■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Vps18Q8R307 973 aa20.14■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Yeats4Q9CR11 227 aaKnown RBP20.14■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Tns2Q8CGB6 1400 aa20.13■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Cplx1P63040 134 aa20.13■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Adam1aQ60813 791 aa20.13■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Tpcn2Q8BWC0 731 aa20.13■□□□□ 0.81
Ckap4-202ENSMUST00000167671 4930572O03RikQ8C5Y0 211 aa20.13■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Slain2Q8CI08 581 aa20.13■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Anxa1P10107 346 aaKnown RBP20.13■□□□□ 0.81
Ckap4-202ENSMUST00000167671 RbsnQ80Y56 783 aa20.13■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Ccng2O08918 344 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Spag5Q7TME2 1165 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Kri1Q8VDQ9 704 aaKnown RBP20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Cnot6lQ8VEG6 555 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 AtrnQ9WU60 1428 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Kcnj4P52189 445 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Ccdc102aQ3TMW1 549 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Cdc37Q61081 379 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Prpf4bQ61136 1007 aaKnown RBP20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Fam170aQ66LM6 333 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Stac3Q8BZ71 360 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Trim52Q8CDV4 233 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 DymQ8CHY3 669 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Ulbp1Q8HWA3 334 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 MbipQ99LQ1 341 aa20.12■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Diaph1O08808 1255 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Eif3bQ8JZQ9 803 aaKnown RBP20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Abcb6Q9DC29 842 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Atp12aQ9Z1W8 1035 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Ccne2Q9Z238 404 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Sall1Q9ER74 1322 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Wnk3Q80XP9 1757 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Ess2O70279 479 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Dnm1P39053 867 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Ercc6lQ8BHK9 1240 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Arl8aQ8VEH3 186 aa20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Gnl2Q99LH1 728 aaKnown RBP20.11■□□□□ 0.81
Ckap4-202ENSMUST00000167671 AK157302I3ITR1 129 aa20.1■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Usp13Q5BKP2 858 aa20.1■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Cep120Q7TSG1 988 aa20.1■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Pnpla2Q8BJ56 486 aa20.1■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Isca1Q9D924 129 aa20.1■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Vnn1Q9Z0K8 512 aa20.1■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Rimbp3Q3V0F0 1606 aa20.1■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Llgl2Q3TJ91 1027 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Acap3Q6NXL5 833 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Prkag3Q8BGM7 489 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Larp6Q8BN59 492 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 ImmtQ8CAQ8 757 aaKnown RBP20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Cyp3a57D3YYZ0 503 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Gm20425E9Q035 978 aaKnown RBP20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Actn3O88990 900 aaKnown RBP20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 SrprbP47758 269 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Uri1Q3TLD5 531 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Myl10Q62082 202 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 RgmbQ7TQ33 436 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Fam213aQ9CYH2 218 aa20.09■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Cyp26a1O55127 497 aa20.08■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Me1P06801 572 aa20.08■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Kcnd1Q03719 651 aa20.08■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Trim25Q61510 634 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms