RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Matr3Q8K310 846 aaKnown RBP13.57□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Cdc42bpbQ7TT50 1713 aa13.57□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Kif5aP33175 1027 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Wdr44Q6NVE8 915 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Lrsam1Q80ZI6 727 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Chmp3Q9CQ10 224 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Cfap53Q9D439 514 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 LlphQ9D945 130 aaKnown RBP13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 AnkarA2RT91 1465 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Sept7O55131 436 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Nat1P50294 290 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Vps41Q5KU39 853 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Idi2Q8BFZ6 227 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Cep57l1Q8VDS7 400 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Gm11983V9GXS8 105 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Ccdc24E9PUW8 296 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Mybl1P51960 751 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Psmc4P54775 418 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Ttc13A0A1L1SSC7 844 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Abcd1P48410 736 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Pip4k2bQ80XI4 416 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Spata16Q8C636 571 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Ino80bQ99PT3 375 aaKnown RBP13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Filip1Q9CS72 1211 aa13.56□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Abca8bQ8K440 1620 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Cep85lA0A1W2P884 806 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Tex35Q14BK3 207 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Specc1lQ2KN98 1118 aaKnown RBP13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Pde3bQ61409 1100 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Jade2Q6ZQF7 829 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Trpa1Q8BLA8 1125 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Abcb6Q9DC29 842 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Uts2Q9QZQ3 123 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Map3k19E9Q3S4 1311 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 AW822073A0A0N4SUK1 652 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 C2cd2E9Q3C1 696 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Fyb1O35601 819 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Pdia3P27773 505 aaKnown RBP13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Tubb5P99024 444 aaKnown RBP13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Fam53cQ8BXQ8 393 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Cul3Q9JLV5 768 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Stxbp4Q9WV89 557 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Wdr93Q402B2 695 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Arl13bQ640N2 427 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Actn2Q9JI91 894 aa13.55□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Diaph1O08808 1255 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Adam1aQ60813 791 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Usp27Q8CEG8 438 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Wdr24Q8CFJ9 790 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Slx4ipQ9D7Y9 413 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Rsph3bQ9DA80 389 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Rabgef1Q9JM13 491 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 EmbP21995 330 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Pax3P24610 479 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Cplx1P63040 134 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Mrps27Q8BK72 415 aaKnown RBP13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Hps6Q8BLY7 805 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Tmc2Q8R4P4 888 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Kif2cQ922S8 721 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Nfe2l3Q9WTM4 660 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Kif24Q6NWW5 1356 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Ncapd2Q8K2Z4 1392 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Gm21969J3QJZ1 289 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Lmnb1P14733 588 aaKnown RBP13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Fam71bQ5STT6 665 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 PreplQ8C167 725 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 TatQ8QZR1 454 aa13.54□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Efcab6Q6P1E8 1516 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Zfyve16Q80U44 1528 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Stk38lQ7TSE6 464 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Usp33Q8R5K2 909 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Clstn1Q9EPL2 979 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Ankrd50F7BE84 1390 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Rgs22G3UYX5 1258 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 ZfxP17012 799 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Capza3P70190 299 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Atp8b1Q148W0 1251 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Mylk4Q5SUV5 386 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Tbc1d1Q60949 1255 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Rnf168Q80XJ2 565 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Slc13a4Q8BZ82 625 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Tsr2Q8C8T8 191 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Trim29Q8R2Q0 587 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 ShprhQ7TPQ3 1674 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Dync1i2O88487 612 aaKnown RBP13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 H2afxP27661 143 aaKnown RBP13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Ccne1Q61457 408 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Gle1Q8R322 699 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Cfap65Q3V0B4 1847 aa13.53□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Zkscan16A2ALW2 728 aa13.52□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Gtpbp10Q8K013 366 aa13.52□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Snx1Q9WV80 522 aa13.52□□□□□ -0.24
Bdnf-205ENSMUST00000111045 Cfap99A0A140LIX9 648 aa13.52□□□□□ -0.25
Bdnf-205ENSMUST00000111045 Zscan20B2KFW1 1030 aa13.52□□□□□ -0.25
Bdnf-205ENSMUST00000111045 Vamp4O70480 141 aa13.52□□□□□ -0.25
Bdnf-205ENSMUST00000111045 Styxl1Q9DAR2 321 aa13.52□□□□□ -0.25
Bdnf-205ENSMUST00000111045 Abca6Q8K441 1624 aa13.52□□□□□ -0.25
Bdnf-205ENSMUST00000111045 Ccdc6D3YZP9 469 aa13.52□□□□□ -0.25
Bdnf-205ENSMUST00000111045 Casp8O89110 480 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms