Protein–RNA interactions for Protein: P24610

Pax3, Paired box protein Pax-3, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax3P24610 Gm25239-201ENSMUST00000174915 86 ntBASIC40.52■■■■■ 4.08
Pax3P24610 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
Pax3P24610 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Pax3P24610 Gm15042-201ENSMUST00000120212 883 ntBASIC35.63■■■■□ 3.29
Pax3P24610 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Pax3P24610 Gm24109-201ENSMUST00000175489 103 ntBASIC35■■■■□ 3.19
Pax3P24610 Gm15045-201ENSMUST00000117359 883 ntBASIC34.83■■■■□ 3.17
Pax3P24610 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Pax3P24610 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Pax3P24610 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.34■■■■□ 3.09
Pax3P24610 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
Pax3P24610 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Pax3P24610 Gm23366-201ENSMUST00000175022 89 ntBASIC33.96■■■■□ 3.03
Pax3P24610 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Pax3P24610 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Pax3P24610 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Pax3P24610 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.21■■■□□ 2.91
Pax3P24610 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
Pax3P24610 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
Pax3P24610 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Pax3P24610 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Pax3P24610 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Pax3P24610 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.64■■■□□ 2.82
Pax3P24610 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Pax3P24610 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Pax3P24610 Psd-208ENSMUST00000224556 2034 ntBASIC32.56■■■□□ 2.8
Pax3P24610 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pax3P24610 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.56■■■□□ 2.8
Pax3P24610 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.77
Pax3P24610 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.32■■■□□ 2.76
Pax3P24610 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.21■■■□□ 2.75
Pax3P24610 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Pax3P24610 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Pax3P24610 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Pax3P24610 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.02■■■□□ 2.72
Pax3P24610 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32■■■□□ 2.71
Pax3P24610 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pax3P24610 Gm25238-201ENSMUST00000174914 89 ntBASIC31.9■■■□□ 2.7
Pax3P24610 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pax3P24610 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pax3P24610 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pax3P24610 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.52■■■□□ 2.64
Pax3P24610 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pax3P24610 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
Pax3P24610 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.33■■■□□ 2.61
Pax3P24610 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Pax3P24610 Gm27325-201ENSMUST00000175467 74 ntBASIC31.29■■■□□ 2.6
Pax3P24610 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pax3P24610 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.16■■■□□ 2.58
Pax3P24610 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pax3P24610 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pax3P24610 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Pax3P24610 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
Pax3P24610 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31■■■□□ 2.55
Pax3P24610 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.97■■■□□ 2.55
Pax3P24610 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.9■■■□□ 2.54
Pax3P24610 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Pax3P24610 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Pax3P24610 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Pax3P24610 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.72■■■□□ 2.51
Pax3P24610 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pax3P24610 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Pax3P24610 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pax3P24610 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pax3P24610 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.65■■■□□ 2.5
Pax3P24610 Rab21-202ENSMUST00000218831 843 ntBASIC30.63■■■□□ 2.49
Pax3P24610 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Pax3P24610 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Pax3P24610 Gm25262-201ENSMUST00000174934 133 ntBASIC30.56■■■□□ 2.48
Pax3P24610 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Pax3P24610 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.5■■■□□ 2.47
Pax3P24610 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Pax3P24610 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.44■■■□□ 2.46
Pax3P24610 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pax3P24610 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pax3P24610 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pax3P24610 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pax3P24610 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Pax3P24610 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Pax3P24610 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.23■■■□□ 2.43
Pax3P24610 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Pax3P24610 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.16■■■□□ 2.42
Pax3P24610 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pax3P24610 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.1■■■□□ 2.41
Pax3P24610 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pax3P24610 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Pax3P24610 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.04■■■□□ 2.4
Pax3P24610 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.03■■■□□ 2.4
Pax3P24610 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Pax3P24610 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.89■■■□□ 2.38
Pax3P24610 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pax3P24610 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pax3P24610 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pax3P24610 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pax3P24610 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pax3P24610 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
Pax3P24610 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.83■■■□□ 2.37
Pax3P24610 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pax3P24610 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.75■■■□□ 2.35
Pax3P24610 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms