RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Calcoco1Q8CGU1 691 aa21.4■■□□□ 1.02
Upf1-201ENSMUST00000075666 Dnajc21E9Q8D0 531 aa21.4■■□□□ 1.02
Upf1-201ENSMUST00000075666 Tbc1d2bQ3U0J8 965 aa21.4■■□□□ 1.02
Upf1-201ENSMUST00000075666 Desi2Q9D291 194 aa21.4■■□□□ 1.02
Upf1-201ENSMUST00000075666 Abcb6Q9DC29 842 aa21.4■■□□□ 1.02
Upf1-201ENSMUST00000075666 Gjc1P28229 396 aa21.4■■□□□ 1.02
Upf1-201ENSMUST00000075666 GptQ8QZR5 496 aa21.4■■□□□ 1.02
Upf1-201ENSMUST00000075666 Rbm19Q8R3C6 952 aaKnown RBP21.4■■□□□ 1.02
Upf1-201ENSMUST00000075666 NpatQ8BMA5 1420 aa21.39■■□□□ 1.02
Upf1-201ENSMUST00000075666 Igbp1Q61249 340 aa21.39■■□□□ 1.02
Upf1-201ENSMUST00000075666 Tbc1d5Q80XQ2 815 aa21.39■■□□□ 1.02
Upf1-201ENSMUST00000075666 Dnm3Q8BZ98 863 aa21.39■■□□□ 1.02
Upf1-201ENSMUST00000075666 Polr2dQ9D7M8 142 aaKnown RBP21.39■■□□□ 1.02
Upf1-201ENSMUST00000075666 Pfkfb1P70266 471 aa21.39■■□□□ 1.01
Upf1-201ENSMUST00000075666 Tpcn2Q8BWC0 731 aa21.39■■□□□ 1.01
Upf1-201ENSMUST00000075666 Arhgef6Q8K4I3 771 aa21.39■■□□□ 1.01
Upf1-201ENSMUST00000075666 Mcm5P49718 733 aa21.39■■□□□ 1.01
Upf1-201ENSMUST00000075666 Znf532Q6NXK2 1036 aa21.39■■□□□ 1.01
Upf1-201ENSMUST00000075666 Kdm3aQ6PCM1 1323 aa21.39■■□□□ 1.01
Upf1-201ENSMUST00000075666 Med14A2ABV5 1459 aaKnown RBP21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 SympkQ80X82 1284 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 Ebag9Q9D0V7 213 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 Eif2ak4Q9QZ05 1648 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 Gm10378F6XQQ1 160 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 VeztQ3ZK22 780 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 Rtn1Q8K0T0 780 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 PsdQ5DTT2 1024 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 Galntl5Q9D4M9 431 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 Setd1aE9PYH6 1716 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 Ccz1Q8C1Y8 480 aa21.38■■□□□ 1.01
Upf1-201ENSMUST00000075666 Klhl34A2AI76 644 aa21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Hoxc9P09633 260 aa21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Cct5P80316 541 aaKnown RBP21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Cnnm2Q3TWN3 875 aa21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Rab3il1Q8VDV3 383 aa21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Epb41l2O70318 988 aaKnown RBP21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Tax1bp1Q3UKC1 814 aaKnown RBP21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 ClasrpQ8CFC7 668 aa21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Usp28Q5I043 1051 aa21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Exoc1Q8R3S6 894 aa21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Nol7Q9D7Z3 254 aaKnown RBP21.37■■□□□ 1.01
Upf1-201ENSMUST00000075666 Fam186bD3Z420 943 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Ssrp1Q08943 708 aaKnown RBP21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Panx2Q6IMP4 677 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Mrpl50Q8VDT9 159 aaKnown RBP21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Rapgef4Q9EQZ6 1011 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Cplx4Q80WM3 160 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Triml1Q8BVP1 470 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Kif2bQ8C0N1 668 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Ndufab1Q9CR21 156 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 PdclQ9DBX2 301 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Slc7a3P70423 618 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Lmod1Q8BVA4 595 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Pcdhb15Q91Y04 786 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Eef2kO08796 724 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Efcab8Q8C9R9 203 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 Pde5aQ8CG03 865 aa21.36■■□□□ 1.01
Upf1-201ENSMUST00000075666 SfswapQ3USH5 945 aaKnown RBP21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 Cfap100Q80VN0 613 aa21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 Ubxn1Q922Y1 297 aa21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 Foxp4Q9DBY0 795 aaKnown RBP21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 Opa1P58281 960 aa21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 Igflr1Q3U4N7 345 aa21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 Prl3d3A0A0M6L0J6 224 aa21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 Prdm1Q60636 856 aa21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 TfrcQ62351 763 aaKnown RBP21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 Morc2aQ69ZX6 1030 aa21.35■■□□□ 1.01
Upf1-201ENSMUST00000075666 Myo3aQ8K3H5 1613 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Stx8O88983 236 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Pde11aP0C1Q2 933 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Bicdl2Q8CHW5 507 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 AatfQ9JKX4 526 aaKnown RBP21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Pkd2l2Q9JLG4 621 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Aox2Q5SGK3 1345 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Tgfb1i1Q62219 461 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Stac3Q8BZ71 360 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Hgh1Q8C3I8 393 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Mapk8ip1Q9WVI9 707 aa21.34■■□□□ 1.01
Upf1-201ENSMUST00000075666 Bend3Q6PAL0 825 aa21.33■■□□□ 1.01
Upf1-201ENSMUST00000075666 Kcnf1Q7TSH7 493 aa21.33■■□□□ 1.01
Upf1-201ENSMUST00000075666 Gli2Q0VGT2 1544 aa21.33■■□□□ 1.01
Upf1-201ENSMUST00000075666 Asic3Q6X1Y6 530 aa21.33■■□□□ 1
Upf1-201ENSMUST00000075666 Iffo1Q8BXL9 562 aa21.33■■□□□ 1
Upf1-201ENSMUST00000075666 ApobrQ8VBT6 942 aa21.33■■□□□ 1
Upf1-201ENSMUST00000075666 Lnx1O70263 728 aa21.33■■□□□ 1
Upf1-201ENSMUST00000075666 Eif4a1P60843 406 aaKnown RBP21.33■■□□□ 1
Upf1-201ENSMUST00000075666 Ctage5Q8R311 779 aa21.33■■□□□ 1
Upf1-201ENSMUST00000075666 Arfgap2Q99K28 520 aa21.33■■□□□ 1
Upf1-201ENSMUST00000075666 Ribc1Q9D0B8 379 aa21.33■■□□□ 1
Upf1-201ENSMUST00000075666 PdiltQ9DAN1 588 aa21.33■■□□□ 1
Upf1-201ENSMUST00000075666 TnksQ6PFX9 1320 aa21.33■■□□□ 1
Upf1-201ENSMUST00000075666 Ddx49Q4FZF3 480 aaKnown RBP21.32■■□□□ 1
Upf1-201ENSMUST00000075666 Ncoa7Q6DFV7 943 aa21.32■■□□□ 1
Upf1-201ENSMUST00000075666 Tsga10Q6NY15 697 aa21.32■■□□□ 1
Upf1-201ENSMUST00000075666 Mei4Q8BRM6 389 aa21.32■■□□□ 1
Upf1-201ENSMUST00000075666 CtcfQ61164 736 aaKnown RBP21.32■■□□□ 1
Upf1-201ENSMUST00000075666 TrhQ62361 256 aa21.32■■□□□ 1
Upf1-201ENSMUST00000075666 Lrsam1Q80ZI6 727 aa21.32■■□□□ 1
Upf1-201ENSMUST00000075666 Nlgn1Q99K10 843 aa21.32■■□□□ 1
Upf1-201ENSMUST00000075666 Mnat1P51949 309 aa21.32■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 73.6 ms