RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Mtmr7Q9Z2C9 660 aa10.38□□□□□ -0.75
Trim42-201ENSMUST00000035026 Flt1P35969 1333 aa10.37□□□□□ -0.75
Trim42-201ENSMUST00000035026 Rnf180Q3U827 592 aa10.37□□□□□ -0.75
Trim42-201ENSMUST00000035026 Cep131Q62036 1060 aa10.37□□□□□ -0.75
Trim42-201ENSMUST00000035026 Zkscan8Q8BSL0 588 aa10.37□□□□□ -0.75
Trim42-201ENSMUST00000035026 Tmem143Q8VD26 458 aa10.37□□□□□ -0.75
Trim42-201ENSMUST00000035026 Gdf11Q9Z1W4 405 aa10.37□□□□□ -0.75
Trim42-201ENSMUST00000035026 GabrdP22933 449 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 GscQ02591 256 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Gpr101Q80T62 511 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Rab3gap1Q80UJ7 981 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 HnrnpuQ8VEK3 800 aaKnown RBP10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Rrs1Q9CYH6 365 aaKnown RBP10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Mcmdc2E9Q956 681 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Gpr162Q3UN16 588 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Ppp4r3aQ6P2K6 820 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Paf1Q8K2T8 535 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Osbpl5Q9ER64 874 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Myoz2Q9JJW5 264 aa10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Rbbp6P97868 1790 aaKnown RBP10.36□□□□□ -0.75
Trim42-201ENSMUST00000035026 Nlrp1aQ2LKU9 1182 aa10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Ctr9Q62018 1173 aaKnown RBP10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Fam13bQ8K2H3 851 aa10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Sh3bp5lQ99LH9 392 aa10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Tpx2A2APB8 745 aaKnown RBP10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Pde8bE9Q4S1 865 aa10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Atp6v1aP50516 617 aaKnown RBP10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Pdcl2Q78Y63 240 aa10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Edc3Q8K2D3 508 aaKnown RBP10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Kdm3aQ6PCM1 1323 aa10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Nphp3Q7TNH6 1325 aa10.35□□□□□ -0.75
Trim42-201ENSMUST00000035026 Zfyve27Q3TXX3 415 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Map3k9Q3U1V8 1077 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Thrap3Q569Z6 951 aaKnown RBP10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Fam102bQ8BQS4 339 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Gjd4Q8BSD4 364 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Skor1Q8BX46 964 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Cluap1Q8R3P7 413 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Slc14a2Q8R4T9 930 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Dydc1Q9D9T0 175 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Klf15Q9EPW2 415 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Col24a1Q30D77 1733 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Psme4Q5SSW2 1843 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 PnnO35691 725 aaKnown RBP10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 CalrP14211 416 aaKnown RBP10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Tmed1Q3V009 227 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Golgb1E9PVZ8 3238 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Carmil3Q3UFQ8 1375 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Myh15E9Q264 1925 aa10.34□□□□□ -0.75
Trim42-201ENSMUST00000035026 Atl3Q91YH5 541 aa10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Pik3ap1Q9EQ32 811 aa10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Tbc1d4Q8BYJ6 1307 aa10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Mfap1aC0HKD8 439 aaKnown RBP10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Mfap1bC0HKD9 439 aaKnown RBP10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Nkx1-2P42580 305 aa10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 NfkbibQ60778 359 aa10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Plekhg6Q8R0J1 787 aa10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Ctage5Q8R311 779 aa10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Scn9aQ62205 1984 aa10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Arfgef1G3X9K3 1846 aaKnown RBP10.33□□□□□ -0.76
Trim42-201ENSMUST00000035026 Casp1P29452 402 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Atp2b3Q0VF55 1220 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Vil1Q62468 827 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 GorabQ8BRM2 368 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Zmynd15Q8C0R7 736 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 4930504O13RikQ8C5Z9 145 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Tbc1d8Q9Z1A9 1134 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Letm1Q9Z2I0 738 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Speer4dL7N216 212 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 CfhP06909 1234 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Ell2Q3UKU1 639 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Klhl23Q6GQU2 558 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Rbm43Q99J64 343 aa10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Ipo7Q9EPL8 1038 aaKnown RBP10.32□□□□□ -0.76
Trim42-201ENSMUST00000035026 Ecm29Q6PDI5 1840 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Myh4Q5SX39 1939 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Atg4a-psA0A0G2JFS9 396 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Gm973E9Q295 1059 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Gm4340L7N2C4 268 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Sept1P42209 366 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Irx2P81066 474 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 NogP97466 232 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Ccdc51Q3URS9 406 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Clec4gQ8BNX1 294 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Atg4aQ8C9S8 396 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Vps53Q8CCB4 832 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Smarca5Q91ZW3 1051 aaKnown RBP10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 FanclQ9CR14 375 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Capn2O08529 700 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Timm10P62073 90 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Anp32eP97822 260 aaKnown RBP10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Gsdma2Q32M21 443 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Smc3Q9CW03 1217 aaKnown RBP10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Kcnq5Q9JK45 933 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Ly6iQ9WU67 134 aa10.31□□□□□ -0.76
Trim42-201ENSMUST00000035026 Klhl34A2AI76 644 aa10.3□□□□□ -0.76
Trim42-201ENSMUST00000035026 Neurod6P48986 337 aa10.3□□□□□ -0.76
Trim42-201ENSMUST00000035026 Atl2Q6PA06 583 aa10.3□□□□□ -0.76
Trim42-201ENSMUST00000035026 ParvgQ9ERD8 331 aa10.3□□□□□ -0.76
Trim42-201ENSMUST00000035026 Ccne2Q9Z238 404 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms