RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Rab3gap1Q80UJ7 981 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Tpcn2Q8BWC0 731 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 4921504E06RikQ8CET2 560 aa20.91■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Six6os1Q9CTN5 574 aa20.9■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Haus2Q9CQS9 234 aa20.9■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Ets1P27577 440 aa20.9■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Exoc3l2D3YUP5 789 aa20.9■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Nf2P46662 596 aa20.9■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Gm9992B2RWK3 458 aa20.89■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Unc93aQ710D3 458 aa20.89■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Mkrn1Q9QXP6 481 aa20.89■□□□□ 0.94
Ebf3-201ENSMUST00000033378 Trim28Q62318 834 aa20.89■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Pram1Q6BCL1 675 aa20.89■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Acbd3Q8BMP6 525 aa20.89■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Nrbp1Q99J45 535 aa20.89■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Lrrc8aQ80WG5 810 aa20.89■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Krt15Q61414 452 aa20.89■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Myl10Q62082 202 aa20.89■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Cplx4Q80WM3 160 aa20.89■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Abcc2Q8VI47 1543 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ccdc114Q3UX62 658 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 SfpqQ8VIJ6 699 aaKnown RBP20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Cfap74Q3UY96 1578 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Spocd1B1ASB6 936 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ublcp1Q8BGR9 318 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 ThemisQ8BGW0 636 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Actn3O88990 900 aaKnown RBP20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Opa1P58281 960 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Csrnp1P59054 583 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Igsf3Q6ZQA6 1194 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Adcy3Q8VHH7 1145 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Rbm42Q91V81 474 aaKnown RBP20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Sept14Q9DA97 430 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Tacc2Q9JJG0 1149 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Card6E9PWH2 1175 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Sult6b1P0CC03 303 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ripk4Q9ERK0 786 aa20.88■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Cnksr1A2A9K7 700 aa20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Eya2O08575 532 aa20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 GnaqP21279 359 aa20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Nxf2Q4ZGD8 691 aa20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Specc1Q5SXY1 1067 aa20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Pde5aQ8CG03 865 aa20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Pcdhb22Q91XZ8 794 aa20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Tex19.1Q99MV2 351 aa20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Nom1Q3UFM5 854 aaKnown RBP20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Arfgap2Q99K28 520 aa20.87■□□□□ 0.93
Ebf3-201ENSMUST00000033378 1700113H08RikE9Q9Q5 327 aa20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Cdca7Q9D0M2 382 aa20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Samsn1P57725 372 aa20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ccnl1Q52KE7 532 aaKnown RBP20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Kdm1aQ6ZQ88 853 aa20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Kcnk13Q8R1P5 405 aa20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Etf1Q8BWY3 437 aaKnown RBP20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ccdc186Q8C9S4 917 aa20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Hsf2bpQ9D4G2 338 aa20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Olr1Q9EQ09 363 aa20.86■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Epb41l2O70318 988 aaKnown RBP20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Calm1P0DP26 149 aaKnown RBP20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Calm2P0DP27 149 aaKnown RBP20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Calm3P0DP28 149 aaKnown RBP20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Nlgn1Q99K10 843 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Mast3Q3U214 1321 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Tnnc1P19123 161 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Gnat2P50149 354 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Tubb2aQ7TMM9 445 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Dhx38Q80X98 1228 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Shtn1Q8K2Q9 631 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Tubb2bQ9CWF2 445 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ebag9Q9D0V7 213 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Serpinc1P32261 465 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Samd15F6XZJ7 620 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Zfp42P22227 288 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ehbp1Q69ZW3 1231 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Tsga10Q6NY15 697 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Dph6Q9CQ28 267 aa20.85■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Zfp213E9QAW0 468 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Unc5clQ6R653 518 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Cul5Q9D5V5 780 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Mast1Q9R1L5 1570 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 PpanQ91YU8 470 aaKnown RBP20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ccdc105Q9D4K7 499 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Zc3h12cQ5DTV4 884 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Col17a1Q07563 1470 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Exoc5Q3TPX4 708 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Tekt3Q6X6Z7 490 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Zkscan8Q8BSL0 588 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Appbp2Q9DAX9 585 aa20.84■□□□□ 0.93
Ebf3-201ENSMUST00000033378 EmbP21995 330 aa20.83■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Syce1Q9D495 329 aa20.83■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Palm3A2TJV2 734 aa20.83■□□□□ 0.93
Ebf3-201ENSMUST00000033378 CtcfQ61164 736 aaKnown RBP20.83■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ift74Q8BKE9 600 aa20.83■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Arhgef6Q8K4I3 771 aa20.83■□□□□ 0.93
Ebf3-201ENSMUST00000033378 Ces1aE9PYP1 563 aa20.83■□□□□ 0.92
Ebf3-201ENSMUST00000033378 Pkp1P97350 728 aaKnown RBP20.83■□□□□ 0.92
Ebf3-201ENSMUST00000033378 Csrnp2Q8BGQ2 534 aa20.83■□□□□ 0.92
Ebf3-201ENSMUST00000033378 Kif2bQ8C0N1 668 aa20.83■□□□□ 0.92
Ebf3-201ENSMUST00000033378 Ndufab1Q9CR21 156 aa20.83■□□□□ 0.92
Ebf3-201ENSMUST00000033378 Dpf1Q9QX66 387 aa20.83■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms