RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ZFPL1O95159 310 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 WNT11O96014 354 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 IL1AP01583 271 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 IGHV3-9P01782 118 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 ITGA5P08648 1049 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 MMP7P09237 267 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 UBCP0CG48 685 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF32P17041 273 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 COL8A2P25067 703 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 OTX1P32242 354 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 SOX6P35712 828 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 PSMB10P40306 273 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 RPS27P42677 84 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 RANBP1P43487 201 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 SERPINB10P48595 397 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 PSMD7P51665 324 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 RAG2P55895 527 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 NANOS3P60323 173 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 UBE2NP61088 152 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 SNRPD2P62316 118 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 PSG4Q00888 419 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 ADIPOQQ15848 244 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 GABRA6Q16445 453 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 DGUOKQ16854 277 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 KRTAP27-1Q3LI81 207 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 ACSM3Q53FZ2 586 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 CCDC92Q53HC0 331 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 BCL2L15Q5TBC7 163 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 CORO6Q6QEF8 472 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 UNQ9370/PRO34162Q6UXP9 181 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 LINC00299Q6ZSB3 139 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 TPRA1Q86W33 373 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 CATSPERDQ86XM0 798 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 CROCCP3Q8IVE0 287 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 ELMOD2Q8IZ81 293 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF676Q8N7Q3 588 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 FAM169BQ8N8A8 192 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 WDR31Q8NA23 367 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 OR10S1Q8NGN2 331 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 OR1J2Q8NGS2 313 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 OR4F5Q8NH21 305 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 LINC01006Q8NI28 216 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 GPR148Q8TDV2 347 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 RNF166Q96A37 237 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 PGLYRP3Q96LB9 341 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 SH3GL3Q99963 347 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 CHCHD6Q9BRQ6 235 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 TMED9Q9BVK6 235 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 OR2H1Q9GZK4 316 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 NAA50Q9GZZ1 169 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 OR51E2Q9H255 320 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 RGCCQ9H4X1 137 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 RNF121Q9H920 327 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 EXOSC4Q9NPD3 245 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 TXNL4BQ9NX01 149 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 NUFIP1Q9UHK0 495 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 FBXO9Q9UK97 447 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 OR52A1Q9UKL2 312 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 HHLA2Q9UM44 414 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 SOX21Q9Y651 276 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 SIRT4Q9Y6E7 314 aaPredicted RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 A3GALT2U3KPV4 340 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 HUWE1Q7Z6Z7 4374 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 TRAV1-2A0A0B4J238 106 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 A0A0G2JMP0 313 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 TRBV5-5A0A0J9YX44 114 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 A0A0U1RQV5 110 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 LOC100506127A0A0U1RQW1 187 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 A0A0X1KG70 313 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 IQCMA0A1B0GVH7 501 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 A0A1W2PR80 420 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 J3QW42 95 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 M0R1B8 84 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 PSMD9O00233 223 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 GABRPO00591 440 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 MAGEB4O15481 346 aaPredicted RBP5.44□□□□□ -1.54
CLDN4-205ENST00000476494 SYNGR3O43761 229 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 DOK2O60496 412 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 MTRF1O75570 445 aaKnown RBP5.44□□□□□ -1.54
CLDN4-205ENST00000476494 SC5DO75845 299 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 MPIG6BO95866 241 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 SERPINA5P05154 406 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 CD2P06729 351 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 PSKH1P11801 424 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 CD79AP11912 226 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 ACHEP22303 614 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 TUBG1P23258 451 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 CFL1P23528 166 aaKnown RBP5.44□□□□□ -1.54
CLDN4-205ENST00000476494 MYL9P24844 172 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 CX3CR1P49238 355 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 MTNR1BP49286 362 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 VBP1P61758 197 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 RAB1AP62820 205 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 RPS25P62851 125 aaKnown RBP5.44□□□□□ -1.54
CLDN4-205ENST00000476494 FABP5Q01469 135 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 GSG1Q2KHT4 349 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 C2orf68Q2NKX9 166 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 C3orf36Q3SXR2 165 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 TBRG1Q3YBR2 411 aa5.44□□□□□ -1.54
CLDN4-205ENST00000476494 Q499Y3 187 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms