RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP6A	YPR052C	PHO8	P11491	566 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	DBP5	P20449	482 aa	Known RBP	5.2	□□□□□ -1.58
NHP6A	YPR052C	PAP1	P29468	568 aa	Known RBP	5.2	□□□□□ -1.58
NHP6A	YPR052C	YSC83	P32792	385 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	RRP1	P35178	278 aa	Predicted RBP	5.2	□□□□□ -1.58
NHP6A	YPR052C	GCS1	P35197	352 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	JNM1	P36224	373 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	MRX3	P38172	270 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	KIC1	P38692	1080 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	SFB3	P38810	929 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	YMR124W	P39523	943 aa	Known RBP	5.2	□□□□□ -1.58
NHP6A	YPR052C	FIG4	P42837	879 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	SMC3	P47037	1230 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	TAM41	P53230	385 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	ATG23	Q06671	453 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	CSR1	Q06705	408 aa	Known RBP	5.2	□□□□□ -1.58
NHP6A	YPR052C	MLH2	Q07980	695 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	YLR422W	Q06409	1932 aa		5.2	□□□□□ -1.58
NHP6A	YPR052C	CET1	O13297	549 aa	Predicted RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	ADE4	P04046	510 aa	Known RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	ERG11	P10614	530 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	CHS2	P14180	963 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	RPO26	P20435	155 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	NAM7	P30771	971 aa	Known RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	BYE1	P36106	594 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	YBL036C	P38197	257 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	CCT4	P39078	528 aa	Known RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	TAF1	P46677	1066 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	SHE10	P53075	577 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	BTN2	P53286	410 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	IMP4	P53941	290 aa	Known RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	TIM8	P57744	87 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	RIP-Chip
NHP6A	YPR052C	CWC21	Q03375	135 aa	Known RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	UTP14	Q04500	899 aa	Known RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	POB3	Q04636	552 aa	Known RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	ECM7	Q06200	448 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	RLP24	Q07915	199 aa	Known RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	REC8	Q12188	680 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	PUS1	Q12211	544 aa	Known RBP	5.19	□□□□□ -1.58
NHP6A	YPR052C	YKL068W-A	Q3E826	78 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	MPD2	Q99316	277 aa		5.19	□□□□□ -1.58
NHP6A	YPR052C	PDE1	P22434	369 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	COT1	P32798	439 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	PCM1	P38628	557 aa	Known RBP	5.18	□□□□□ -1.58
NHP6A	YPR052C	NEM1	P38757	446 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	CIN4	P39110	191 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	HXT8	P40886	569 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	AVT1	P47082	602 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	COS5	P47187	383 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	PSP1	P50896	841 aa	Known RBP	5.18	□□□□□ -1.58
NHP6A	YPR052C	CUL3	P53202	744 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	RTT102	P53330	157 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	ESBP6	P53918	673 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	NIS1	P53939	407 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	ALG11	P53954	548 aa	Known RBP	5.18	□□□□□ -1.58
NHP6A	YPR052C	ADA2	Q02336	434 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	DIG1	Q03063	452 aa	Known RBP	5.18	□□□□□ -1.58
NHP6A	YPR052C	YMR114C	Q04471	368 aa	Known RBP	5.18	□□□□□ -1.58
NHP6A	YPR052C	DON1	Q05610	365 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	YPR084W	Q06821	456 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	SLX4	Q12098	748 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	RMP1	Q12530	201 aa		5.18	□□□□□ -1.58
NHP6A	YPR052C	TEL1	P38110	2787 aa		5.17	□□□□□ -1.58
NHP6A	YPR052C	RPS14A	P06367	137 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	GFA1	P14742	717 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	CYS3	P31373	394 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	ECM32	P32644	1121 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	RPS14B	P39516	138 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	SIP5	P40210	489 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	MNP1	P53163	194 aa	Predicted RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	YGR021W	P53212	290 aa		5.17	□□□□□ -1.58
NHP6A	YPR052C	CWC22	P53333	577 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	TUB4	P53378	473 aa		5.17	□□□□□ -1.58
NHP6A	YPR052C	YNL146W	P53906	100 aa		5.17	□□□□□ -1.58
NHP6A	YPR052C	YHM2	Q04013	314 aa		5.17	□□□□□ -1.58
NHP6A	YPR052C	YML082W	Q04533	649 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	EAF1	Q06337	982 aa		5.17	□□□□□ -1.58
NHP6A	YPR052C	TSR1	Q07381	788 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	IES4	Q08561	116 aa		5.17	□□□□□ -1.58
NHP6A	YPR052C	CDC53	Q12018	815 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	YDL206W	Q12424	762 aa		5.17	□□□□□ -1.58
NHP6A	YPR052C	PDH1	Q12428	516 aa	Known RBP	5.17	□□□□□ -1.58
NHP6A	YPR052C	MSB2	P32334	1306 aa		5.17	□□□□□ -1.58
NHP6A	YPR052C	VPS3	P23643	1011 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
NHP6A	YPR052C	KIP1	P28742	1111 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	CDC11	P32458	415 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	MUD1	P32605	298 aa	Known RBP	5.16	□□□□□ -1.58
NHP6A	YPR052C	CNS1	P33313	385 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	TRM2	P33753	639 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	YKL050C	P35736	922 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	TRZ1	P36159	838 aa	Predicted RBP	5.16	□□□□□ -1.58
NHP6A	YPR052C	POL12	P38121	705 aa	Predicted RBP	5.16	□□□□□ -1.58
NHP6A	YPR052C	MMS4	P38257	691 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	VID24	P38263	362 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	YER186C	P40101	306 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	MVP1	P40959	511 aa	Known RBP	5.16	□□□□□ -1.58
NHP6A	YPR052C	VPS25	P47142	202 aa		5.16	□□□□□ -1.58
NHP6A	YPR052C	VPS70	P47161	811 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms