RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C ADI1Q03677 179 aa2.54□□□□□ -2
ATG11YPR049C GLN3P18494 730 aa2.54□□□□□ -2
ATG11YPR049C SFP1P32432 683 aa2.54□□□□□ -2
ATG11YPR049C PCF11P39081 626 aaPredicted RBP2.54□□□□□ -2
ATG11YPR049C YEL025CP39991 1188 aa2.54□□□□□ -2
ATG11YPR049C HDA1P53973 706 aa2.54□□□□□ -2
ATG11YPR049C CRR1Q05790 422 aa2.54□□□□□ -2
ATG11YPR049C RTT10Q08924 1013 aa2.54□□□□□ -2
ATG11YPR049C SNF1P06782 633 aaKnown RBP2.53□□□□□ -2
ATG11YPR049C SAM2P19358 384 aaKnown RBP2.53□□□□□ -2
ATG11YPR049C CYS3P31373 394 aaKnown RBP2.53□□□□□ -2
ATG11YPR049C MCX1P38323 520 aaPredicted RBP2.53□□□□□ -2
ATG11YPR049C UME6P39001 836 aa2.53□□□□□ -2
ATG11YPR049C ALR2P43553 858 aa2.53□□□□□ -2
ATG11YPR049C YGL176CP46945 554 aa2.53□□□□□ -2
ATG11YPR049C REV1P12689 985 aa2.53□□□□□ -2
ATG11YPR049C SYP1P25623 870 aaKnown RBP2.53□□□□□ -2
ATG11YPR049C PRO3P32263 286 aaKnown RBP2.53□□□□□ -2
ATG11YPR049C VPH1P32563 840 aaKnown RBP2.53□□□□□ -2
ATG11YPR049C UBP11P36026 717 aa2.53□□□□□ -2
ATG11YPR049C LEU5P38702 357 aa2.53□□□□□ -2
ATG11YPR049C FMO1P38866 432 aa2.53□□□□□ -2
ATG11YPR049C VID27P40157 782 aa2.53□□□□□ -2
ATG11YPR049C RMD8P43620 662 aa2.53□□□□□ -2
ATG11YPR049C YGL242CP53066 181 aa2.53□□□□□ -2
ATG11YPR049C SLG1P54867 378 aa2.53□□□□□ -2
ATG11YPR049C ADA2Q02336 434 aa2.53□□□□□ -2
ATG11YPR049C PEX19Q07418 342 aa2.53□□□□□ -2
ATG11YPR049C ALG3P38179 458 aa2.52□□□□□ -2.01
ATG11YPR049C ESL1P40456 1118 aa2.52□□□□□ -2.01
ATG11YPR049C FOL1P53848 824 aa2.52□□□□□ -2.01
ATG11YPR049C CSI1Q04368 295 aa2.52□□□□□ -2.01
ATG11YPR049C CCP1P00431 361 aa2.52□□□□□ -2.01
ATG11YPR049C ADE8P04161 214 aa2.52□□□□□ -2.01
ATG11YPR049C COQ1P18900 473 aa2.52□□□□□ -2.01
ATG11YPR049C ADK2P26364 225 aa2.52□□□□□ -2.01
ATG11YPR049C DSS1P39112 969 aa2.52□□□□□ -2.01
ATG11YPR049C IRC8P47046 822 aa2.52□□□□□ -2.01
ATG11YPR049C NIT3P49954 291 aa2.52□□□□□ -2.01
ATG11YPR049C NUP84P52891 726 aa2.52□□□□□ -2.01
ATG11YPR049C MDR1P53258 950 aa2.52□□□□□ -2.01
ATG11YPR049C YOR059CQ08448 450 aaKnown RBP2.52□□□□□ -2.01
ATG11YPR049C REC8Q12188 680 aa2.52□□□□□ -2.01
ATG11YPR049C YBR056W-AI2HB52 66 aa2.52□□□□□ -2.01
ATG11YPR049C CDC16P09798 840 aa2.52□□□□□ -2.01
ATG11YPR049C GAL11P19659 1081 aa2.52□□□□□ -2.01
ATG11YPR049C PGS1P25578 521 aa2.52□□□□□ -2.01
ATG11YPR049C NMD2P38798 1089 aaKnown RBP2.52□□□□□ -2.01
ATG11YPR049C OSW7P43611 510 aa2.52□□□□□ -2.01
ATG11YPR049C BUD9P53226 547 aa2.52□□□□□ -2.01
ATG11YPR049C YNR065CP53751 1116 aa2.52□□□□□ -2.01
ATG11YPR049C YAT1P80235 687 aa2.52□□□□□ -2.01
ATG11YPR049C NAN1Q02931 896 aaKnown RBP2.52□□□□□ -2.01
ATG11YPR049C PDH1Q12428 516 aaKnown RBP2.52□□□□□ -2.01
ATG11YPR049C GCN1P33892 2672 aaKnown RBP2.52□□□□□ -2.01
ATG11YPR049C PDR18P53756 1333 aa2.52□□□□□ -2.01
ATG11YPR049C COX4P04037 155 aa2.51□□□□□ -2.01
ATG11YPR049C HCA4P20448 770 aaKnown RBP2.51□□□□□ -2.01
ATG11YPR049C LYP1P32487 611 aa2.51□□□□□ -2.01
ATG11YPR049C ABD1P32783 436 aaPredicted RBP2.51□□□□□ -2.01
ATG11YPR049C GEM1P39722 662 aa2.51□□□□□ -2.01
ATG11YPR049C FAF1P40546 346 aaPredicted RBP2.51□□□□□ -2.01
ATG11YPR049C GCV2P49095 1034 aa2.51□□□□□ -2.01
ATG11YPR049C COX18P53239 316 aa2.51□□□□□ -2.01
ATG11YPR049C TDA7P53882 636 aaPredicted RBP2.51□□□□□ -2.01
ATG11YPR049C ROT1Q03691 256 aa2.51□□□□□ -2.01
ATG11YPR049C MRI1Q06489 411 aaKnown RBP2.51□□□□□ -2.01
ATG11YPR049C TRE1Q08919 783 aa2.51□□□□□ -2.01
ATG11YPR049C HFI1Q12060 488 aa2.51□□□□□ -2.01
ATG11YPR049C RAD50P12753 1312 aa2.51□□□□□ -2.01
ATG11YPR049C HTS1P07263 546 aaKnown RBP2.51□□□□□ -2.01
ATG11YPR049C PRP9P19736 530 aaKnown RBP2.51□□□□□ -2.01
ATG11YPR049C GAS1P22146 559 aaKnown RBP2.51□□□□□ -2.01
ATG11YPR049C TMT1P32643 299 aa2.51□□□□□ -2.01
ATG11YPR049C GCV1P48015 400 aa2.51□□□□□ -2.01
ATG11YPR049C RPS7BP48164 190 aaKnown RBP2.51□□□□□ -2.01
ATG11YPR049C SKP1P52286 194 aa2.51□□□□□ -2.01
ATG11YPR049C RPS15Q01855 142 aaKnown RBP2.51□□□□□ -2.01
ATG11YPR049C SSY1Q03770 852 aa2.51□□□□□ -2.01
ATG11YPR049C YDR215CQ12240 137 aa2.51□□□□□ -2.01
ATG11YPR049C TY4B-PA0A0B7P3V8 1104 aa2.51□□□□□ -2.01
ATG11YPR049C DPH2P32461 534 aa2.51□□□□□ -2.01
ATG11YPR049C NNF1P47149 201 aa2.51□□□□□ -2.01
ATG11YPR049C PSP1P50896 841 aaKnown RBP2.51□□□□□ -2.01
ATG11YPR049C ECM7Q06200 448 aa2.51□□□□□ -2.01
ATG11YPR049C PUS7Q08647 676 aaKnown RBP2.51□□□□□ -2.01
ATG11YPR049C SVS1Q12254 260 aa2.51□□□□□ -2.01
ATG11YPR049C TY4A-HQ6Q5P6 413 aa2.51□□□□□ -2.01
ATG11YPR049C CSF1Q12150 2958 aa2.5□□□□□ -2.01
ATG11YPR049C SWC3P31376 625 aa2.5□□□□□ -2.01
ATG11YPR049C SFA1P32771 386 aa2.5□□□□□ -2.01
ATG11YPR049C TIF5P38431 405 aaKnown RBP2.5□□□□□ -2.01
ATG11YPR049C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
ATG11YPR049C YOR389WQ08912 624 aa2.5□□□□□ -2.01
ATG11YPR049C YPL278CQ08990 100 aa2.5□□□□□ -2.01
ATG11YPR049C PRC1P00729 532 aa2.5□□□□□ -2.01
ATG11YPR049C HAP2P06774 265 aa2.5□□□□□ -2.01
ATG11YPR049C RPC31P17890 251 aa2.5□□□□□ -2.01
ATG11YPR049C PRP22P24384 1145 aaKnown RBP2.5□□□□□ -2.01
ATG11YPR049C NDT80P38830 627 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms