RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRO7	YPR032W	SMC1	P32908	1225 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	UIP5	P36137	443 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	DPH1	P40487	425 aa	Known RBP	4.16	□□□□□ -1.74
SRO7	YPR032W	ALG2	P43636	503 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	VMA10	P48836	114 aa	Known RBP	4.16	□□□□□ -1.74
SRO7	YPR032W	SHR3	Q02774	210 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	ABZ2	Q03266	374 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	COQ9	Q05779	260 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	YLR278C	Q05854	1341 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	SSF2	Q12153	453 aa	Predicted RBP	4.16	□□□□□ -1.74
SRO7	YPR032W	POL3	P15436	1097 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	POL30	P15873	258 aa	Known RBP	4.16	□□□□□ -1.74
SRO7	YPR032W	HEM15	P16622	393 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	KGD2	P19262	463 aa	Predicted RBP	4.16	□□□□□ -1.74
SRO7	YPR032W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SRO7	YPR032W	NUP133	P36161	1157 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	TSC10	P38342	320 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	MET12	P46151	657 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	PKH1	Q03407	766 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	YOL075C	Q08234	1294 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	GYP5	Q12344	894 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	EMP46	Q12396	444 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	MYO1	P08964	1928 aa		4.16	□□□□□ -1.74
SRO7	YPR032W	ATP2	P00830	511 aa	Known RBP	4.15	□□□□□ -1.74
SRO7	YPR032W	RPT5	P33297	434 aa	Known RBP	4.15	□□□□□ -1.74
SRO7	YPR032W	RPC25	P35718	212 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	SMC2	P38989	1170 aa	Known RBP	4.15	□□□□□ -1.74
SRO7	YPR032W	ULP2	P40537	1034 aa	Predicted RBP	4.15	□□□□□ -1.74
SRO7	YPR032W	THI6	P41835	540 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	HXT10	P43581	546 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	SAD1	P43589	448 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	HOS2	P53096	452 aa	Predicted RBP	4.15	□□□□□ -1.74
SRO7	YPR032W	VPS64	Q03944	604 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	SYF1	Q04048	859 aa	Predicted RBP	4.15	□□□□□ -1.74
SRO7	YPR032W	KAR5	Q04746	504 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	DYN3	Q04949	312 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	MDM36	Q06820	579 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	AIM41	Q12032	185 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	ACF2	Q12168	779 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	MNL2	Q12205	849 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	ZRT2	Q12436	422 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	ARP6	Q12509	438 aa		4.15	□□□□□ -1.74
SRO7	YPR032W	NOT5	Q12514	560 aa	Predicted RBP	4.15	□□□□□ -1.74
SRO7	YPR032W	RIM15	P43565	1770 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	HIS4	P00815	799 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	RPS3	P05750	240 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	VMA2	P16140	517 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	RET1	P22276	1149 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	IMP2'	P32351	346 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	STP2	P38704	541 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	DIA4	P38705	446 aa	Predicted RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	AKR1	P39010	764 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	YER137C	P40083	148 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	IRC5	P43610	853 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	YGR021W	P53212	290 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	CPR6	P53691	371 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	IPI3	P53877	555 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	ZDS2	P54786	942 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	SED5	Q01590	340 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	ISU1	Q03020	165 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	ESF1	Q06344	628 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	BRE4	Q07660	1125 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	YLR125W	Q12138	136 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	NUC1	P08466	329 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	HSP60	P19882	572 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	CPR3	P25719	182 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	SUV3	P32580	737 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	EAP1	P36041	632 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	NTR2	P36118	322 aa	Predicted RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	GIP1	P38229	639 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	YBR225W	P38321	900 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	BNI5	P53890	448 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	YNL108C	P53929	270 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	DAK1	P54838	584 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	FCP1	Q03254	732 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	URC2	Q04411	772 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	EST2	Q06163	884 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	VPS36	Q06696	566 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	PUS7	Q08647	676 aa	Known RBP	4.15	□□□□□ -1.75
SRO7	YPR032W	NCR1	Q12200	1170 aa		4.15	□□□□□ -1.75
SRO7	YPR032W	GPA2	P10823	449 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	HXT3	P32466	567 aa	Known RBP	4.14	□□□□□ -1.75
SRO7	YPR032W	MCD4	P36051	919 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	BCH2	P36122	765 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	PRK1	P40494	810 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	BNA3	P47039	444 aa	Known RBP	4.14	□□□□□ -1.75
SRO7	YPR032W	RNR4	P49723	345 aa	Known RBP	4.14	□□□□□ -1.75
SRO7	YPR032W	ORC3	P54790	616 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	PTA1	Q01329	785 aa	Predicted RBP	4.14	□□□□□ -1.75
SRO7	YPR032W	MTG1	Q03151	367 aa	Predicted RBP	4.14	□□□□□ -1.75
SRO7	YPR032W	MMT1	Q03218	510 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	ATG29	Q12092	213 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	RAD61	Q99359	647 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	FLO11	P08640	1367 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	CDC19	P00549	500 aa	Known RBP	4.14	□□□□□ -1.75
SRO7	YPR032W	SEC2	P17065	759 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	VMA8	P32610	256 aa	Known RBP	4.14	□□□□□ -1.75
SRO7	YPR032W	GYP6	P32806	458 aa		4.14	□□□□□ -1.75
SRO7	YPR032W	SIP2	P34164	415 aa	Known RBP	4.14	□□□□□ -1.75
SRO7	YPR032W	ETR1	P38071	380 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms