RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W NCL1P38205 684 aaKnown RBP9.02□□□□□ -0.97
AMF1YOR378W REI1P38344 393 aaPredicted RBP9.02□□□□□ -0.97
AMF1YOR378W RCK2P38623 610 aa9.02□□□□□ -0.97
AMF1YOR378W HIS2P38635 335 aa9.02□□□□□ -0.97
AMF1YOR378W POL31P46957 487 aa9.02□□□□□ -0.97
AMF1YOR378W PUS2P53167 370 aa9.02□□□□□ -0.97
AMF1YOR378W STP1Q00947 519 aa9.02□□□□□ -0.97
AMF1YOR378W REC8Q12188 680 aa9.02□□□□□ -0.97
AMF1YOR378W LAA1P39526 2014 aa9.02□□□□□ -0.97
AMF1YOR378W JIP3O13555 125 aa9.01□□□□□ -0.97
AMF1YOR378W BI2P03873 423 aa9.01□□□□□ -0.97
AMF1YOR378W BI4P03879 638 aa9.01□□□□□ -0.97
AMF1YOR378W GAL80P04387 435 aa9.01□□□□□ -0.97
AMF1YOR378W HAP2P06774 265 aa9.01□□□□□ -0.97
AMF1YOR378W GFA1P14742 717 aaKnown RBP9.01□□□□□ -0.97
AMF1YOR378W CAD1P24813 409 aaKnown RBP9.01□□□□□ -0.97
AMF1YOR378W SHE3P38272 425 aaKnown RBP9.01□□□□□ -0.97
AMF1YOR378W CBR1P38626 284 aaKnown RBP9.01□□□□□ -0.97
AMF1YOR378W YHR202WP38887 602 aa9.01□□□□□ -0.97
AMF1YOR378W SMF1P38925 575 aa9.01□□□□□ -0.97
AMF1YOR378W MAL13P53338 473 aa9.01□□□□□ -0.97
AMF1YOR378W ATG16Q03818 150 aa9.01□□□□□ -0.97
AMF1YOR378W POB3Q04636 552 aaKnown RBP9.01□□□□□ -0.97
AMF1YOR378W PUF3Q07807 879 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
AMF1YOR378W TRE1Q08919 783 aa9.01□□□□□ -0.97
AMF1YOR378W BI3Q9ZZW7 517 aa9.01□□□□□ -0.97
AMF1YOR378W DBF4P32325 704 aa9□□□□□ -0.97
AMF1YOR378W XDJ1P39102 459 aa9□□□□□ -0.97
AMF1YOR378W YEL075CP39972 122 aa9□□□□□ -0.97
AMF1YOR378W DSE1P40077 573 aa9□□□□□ -0.97
AMF1YOR378W SPC98P53540 846 aa9□□□□□ -0.97
AMF1YOR378W DIG1Q03063 452 aaKnown RBP9□□□□□ -0.97
AMF1YOR378W MUB1Q03162 620 aa9□□□□□ -0.97
AMF1YOR378W NOP14Q99207 810 aaKnown RBP9□□□□□ -0.97
AMF1YOR378W TPK1P06244 397 aa9□□□□□ -0.97
AMF1YOR378W CIT2P08679 460 aa9□□□□□ -0.97
AMF1YOR378W SAT4P25333 603 aaKnown RBP9□□□□□ -0.97
AMF1YOR378W GAC1P28006 793 aa9□□□□□ -0.97
AMF1YOR378W PAP1P29468 568 aaKnown RBP9□□□□□ -0.97
AMF1YOR378W FRE1P32791 686 aa9□□□□□ -0.97
AMF1YOR378W BYE1P36106 594 aa9□□□□□ -0.97
AMF1YOR378W CCL1P37366 393 aa9□□□□□ -0.97
AMF1YOR378W RRT2P38332 387 aa9□□□□□ -0.97
AMF1YOR378W QNS1P38795 714 aaKnown RBP9□□□□□ -0.97
AMF1YOR378W SIP5P40210 489 aaKnown RBP9□□□□□ -0.97
AMF1YOR378W OPT1P40897 799 aa9□□□□□ -0.97
AMF1YOR378W MAD1P40957 749 aa9□□□□□ -0.97
AMF1YOR378W BRO1P48582 844 aa9□□□□□ -0.97
AMF1YOR378W CWC22P53333 577 aaKnown RBP9□□□□□ -0.97
AMF1YOR378W SFI1Q12369 946 aa9□□□□□ -0.97
AMF1YOR378W YLR462WO13556 202 aa8.99□□□□□ -0.97
AMF1YOR378W ADE3P07245 946 aaKnown RBP8.99□□□□□ -0.97
AMF1YOR378W EST1P17214 699 aaPredicted RBP8.99□□□□□ -0.97
AMF1YOR378W ADK2P26364 225 aa8.99□□□□□ -0.97
AMF1YOR378W ABD1P32783 436 aaPredicted RBP8.99□□□□□ -0.97
AMF1YOR378W MRP4P32902 394 aa8.99□□□□□ -0.97
AMF1YOR378W APN2P38207 520 aa8.99□□□□□ -0.97
AMF1YOR378W YHL049CP38722 271 aa8.99□□□□□ -0.97
AMF1YOR378W JHD1P40034 492 aa8.99□□□□□ -0.97
AMF1YOR378W LCP5P40079 357 aaPredicted RBP8.99□□□□□ -0.97
AMF1YOR378W YER189WP40104 122 aa8.99□□□□□ -0.97
AMF1YOR378W ASG1P40467 964 aa8.99□□□□□ -0.97
AMF1YOR378W YFL064CP43540 174 aa8.99□□□□□ -0.97
AMF1YOR378W ARO80Q04052 950 aa8.99□□□□□ -0.97
AMF1YOR378W YOR059CQ08448 450 aaKnown RBP8.99□□□□□ -0.97
AMF1YOR378W ZRT2Q12436 422 aa8.99□□□□□ -0.97
AMF1YOR378W YBL111CQ3E7Y5 667 aa8.99□□□□□ -0.97
AMF1YOR378W SLA2P33338 968 aa8.98□□□□□ -0.97
AMF1YOR378W RRP1P35178 278 aaPredicted RBP8.98□□□□□ -0.97
AMF1YOR378W YBL036CP38197 257 aa8.98□□□□□ -0.97
AMF1YOR378W PMC1P38929 1173 aaPredicted RBP8.98□□□□□ -0.97
AMF1YOR378W YEL023CP39992 682 aa8.98□□□□□ -0.97
AMF1YOR378W SNZ3P43545 298 aa8.98□□□□□ -0.97
AMF1YOR378W SNZ2P53824 298 aa8.98□□□□□ -0.97
AMF1YOR378W SXM1Q04175 944 aaKnown RBP8.98□□□□□ -0.97
AMF1YOR378W GYL1Q04322 720 aa8.98□□□□□ -0.97
AMF1YOR378W TAF10Q12030 206 aa8.98□□□□□ -0.97
AMF1YOR378W SPO21Q12411 609 aa8.98□□□□□ -0.97
AMF1YOR378W KAR3P17119 729 aa8.97□□□□□ -0.97
AMF1YOR378W LRE1P25579 583 aaKnown RBP8.97□□□□□ -0.97
AMF1YOR378W YBL055CP34220 418 aaPredicted RBP8.97□□□□□ -0.97
AMF1YOR378W SEG2P34250 1132 aa8.97□□□□□ -0.97
AMF1YOR378W MSC7P38694 644 aa8.97□□□□□ -0.97
AMF1YOR378W RPT2P40327 437 aaKnown RBP8.97□□□□□ -0.97
AMF1YOR378W RPC17P47076 161 aa8.97□□□□□ -0.97
AMF1YOR378W VPS54Q12071 889 aa8.97□□□□□ -0.97
AMF1YOR378W PDR1P12383 1068 aa8.96□□□□□ -0.97
AMF1YOR378W PUT4P15380 627 aa8.96□□□□□ -0.97
AMF1YOR378W CNS1P33313 385 aa8.96□□□□□ -0.97
AMF1YOR378W MAC1P35192 417 aa8.96□□□□□ -0.97
AMF1YOR378W HMT1P38074 348 aa8.96□□□□□ -0.97
AMF1YOR378W PCM1P38628 557 aaKnown RBP8.96□□□□□ -0.97
AMF1YOR378W TMN3P40071 706 aa8.96□□□□□ -0.97
AMF1YOR378W RSC8P43609 557 aaKnown RBP8.96□□□□□ -0.97
AMF1YOR378W IVY1Q04934 453 aa8.96□□□□□ -0.97
AMF1YOR378W MDM38Q08179 573 aa8.96□□□□□ -0.97
AMF1YOR378W EMP46Q12396 444 aa8.96□□□□□ -0.97
AMF1YOR378W KGD2P19262 463 aaPredicted RBP8.95□□□□□ -0.98
AMF1YOR378W SEC1P30619 724 aaKnown RBP8.95□□□□□ -0.98
AMF1YOR378W CCT4P39078 528 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms