RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W CUL3P53202 744 aa4.12□□□□□ -1.75
ROD1YOR018W MDR1P53258 950 aa4.12□□□□□ -1.75
ROD1YOR018W PPM1Q04081 328 aa4.12□□□□□ -1.75
ROD1YOR018W OSW2Q12202 724 aa4.12□□□□□ -1.75
ROD1YOR018W MDM20Q12387 796 aaKnown RBP4.12□□□□□ -1.75
ROD1YOR018W RTP1Q12751 981 aa4.12□□□□□ -1.75
ROD1YOR018W CIT2P08679 460 aa4.12□□□□□ -1.75
ROD1YOR018W WHI2P12611 486 aa4.12□□□□□ -1.75
ROD1YOR018W DUR3P33413 735 aa4.12□□□□□ -1.75
ROD1YOR018W YBR197CP38306 217 aa4.12□□□□□ -1.75
ROD1YOR018W SMF1P38925 575 aa4.12□□□□□ -1.75
ROD1YOR018W ISU1Q03020 165 aa4.12□□□□□ -1.75
ROD1YOR018W ABP140Q08641 628 aaKnown RBP4.12□□□□□ -1.75
ROD1YOR018W YDR524C-BQ3E6R4 66 aa4.12□□□□□ -1.75
ROD1YOR018W RNR1P21524 888 aaKnown RBP4.11□□□□□ -1.75
ROD1YOR018W PAT1P25644 796 aaKnown RBP4.11□□□□□ -1.75
ROD1YOR018W MSS51P32335 436 aa4.11□□□□□ -1.75
ROD1YOR018W SWI3P32591 825 aa4.11□□□□□ -1.75
ROD1YOR018W MRT4P33201 236 aaKnown RBP4.11□□□□□ -1.75
ROD1YOR018W YKL050CP35736 922 aa4.11□□□□□ -1.75
ROD1YOR018W EFM2P38347 419 aa4.11□□□□□ -1.75
ROD1YOR018W YEL075CP39972 122 aa4.11□□□□□ -1.75
ROD1YOR018W SBE2P42223 864 aaKnown RBP4.11□□□□□ -1.75
ROD1YOR018W ATG36P46983 293 aa4.11□□□□□ -1.75
ROD1YOR018W NGL3Q03210 505 aa4.11□□□□□ -1.75
ROD1YOR018W YPQ2Q06328 317 aa4.11□□□□□ -1.75
ROD1YOR018W YOR059CQ08448 450 aaKnown RBP4.11□□□□□ -1.75
ROD1YOR018W ASP3-2P0CX77 362 aa4.11□□□□□ -1.75
ROD1YOR018W ASP3-3P0CX78 362 aa4.11□□□□□ -1.75
ROD1YOR018W ASP3-4P0CX79 362 aa4.11□□□□□ -1.75
ROD1YOR018W ASP3-1P0CZ17 362 aa4.11□□□□□ -1.75
ROD1YOR018W KAR3P17119 729 aa4.11□□□□□ -1.75
ROD1YOR018W KIP1P28742 1111 aa4.11□□□□□ -1.75
ROD1YOR018W CSE2P33308 149 aa4.11□□□□□ -1.75
ROD1YOR018W HXT5P38695 592 aa4.11□□□□□ -1.75
ROD1YOR018W YTA12P40341 825 aa4.11□□□□□ -1.75
ROD1YOR018W MKT1P40850 830 aaKnown RBP4.11□□□□□ -1.75
ROD1YOR018W BRO1P48582 844 aa4.11□□□□□ -1.75
ROD1YOR018W DOT1Q04089 582 aaKnown RBP4.11□□□□□ -1.75
ROD1YOR018W RRB1Q04225 511 aaKnown RBP4.11□□□□□ -1.75
ROD1YOR018W DON1Q05610 365 aa4.11□□□□□ -1.75
ROD1YOR018W CUR1Q06469 252 aa4.11□□□□□ -1.75
ROD1YOR018W YCG1Q06680 1035 aa4.11□□□□□ -1.75
ROD1YOR018W YPR078CQ06813 372 aa4.11□□□□□ -1.75
ROD1YOR018W IWR1Q07532 353 aaPredicted RBP4.11□□□□□ -1.75
ROD1YOR018W CDC33P07260 213 aaKnown RBP4.1□□□□□ -1.75
ROD1YOR018W SWI6P09959 803 aa4.1□□□□□ -1.75
ROD1YOR018W GLN3P18494 730 aa4.1□□□□□ -1.75
ROD1YOR018W POT1P27796 417 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
ROD1YOR018W NPP2P39997 493 aa4.1□□□□□ -1.75
ROD1YOR018W EEB1Q02891 456 aa4.1□□□□□ -1.75
ROD1YOR018W NEW1Q08972 1196 aaKnown RBP4.1□□□□□ -1.75
ROD1YOR018W YOR022CQ12204 715 aa4.1□□□□□ -1.75
ROD1YOR018W ECM3Q99252 613 aa4.1□□□□□ -1.75
ROD1YOR018W FUR4P05316 633 aaKnown RBP4.1□□□□□ -1.75
ROD1YOR018W STE6P12866 1290 aa4.1□□□□□ -1.75
ROD1YOR018W GFA1P14742 717 aaKnown RBP4.1□□□□□ -1.75
ROD1YOR018W VAN1P23642 535 aa4.1□□□□□ -1.75
ROD1YOR018W GPI10P30777 616 aa4.1□□□□□ -1.75
ROD1YOR018W CSG2P35206 410 aa4.1□□□□□ -1.75
ROD1YOR018W GPT2P36148 743 aa4.1□□□□□ -1.75
ROD1YOR018W NCL1P38205 684 aaKnown RBP4.1□□□□□ -1.75
ROD1YOR018W REI1P38344 393 aaPredicted RBP4.1□□□□□ -1.75
ROD1YOR018W RLP24Q07915 199 aaKnown RBP4.1□□□□□ -1.75
ROD1YOR018W CHS1P08004 1131 aa4.09□□□□□ -1.75
ROD1YOR018W VMA4P22203 233 aaKnown RBP4.09□□□□□ -1.75
ROD1YOR018W RME1P32338 300 aaKnown RBP4.09□□□□□ -1.75
ROD1YOR018W GCS1P35197 352 aa4.09□□□□□ -1.75
ROD1YOR018W MMS4P38257 691 aa4.09□□□□□ -1.75
ROD1YOR018W SCD6P45978 349 aaKnown RBP RIP-Chip data4.09□□□□□ -1.75not detected
ROD1YOR018W STU2P46675 888 aa4.09□□□□□ -1.75
ROD1YOR018W PRP31P49704 494 aaPredicted RBP4.09□□□□□ -1.75
ROD1YOR018W CUS1Q02554 436 aaPredicted RBP4.09□□□□□ -1.75
ROD1YOR018W CWC21Q03375 135 aaKnown RBP4.09□□□□□ -1.75
ROD1YOR018W UTP5Q04177 643 aaKnown RBP4.09□□□□□ -1.75
ROD1YOR018W YMR114CQ04471 368 aaKnown RBP4.09□□□□□ -1.75
ROD1YOR018W YLR455WQ06188 304 aa4.09□□□□□ -1.75
ROD1YOR018W ECM7Q06200 448 aa4.09□□□□□ -1.75
ROD1YOR018W CTF3Q12748 733 aa4.09□□□□□ -1.75
ROD1YOR018W YPR117WQ06116 2489 aa4.09□□□□□ -1.75
ROD1YOR018W BI2P03873 423 aa4.09□□□□□ -1.76
ROD1YOR018W BI4P03879 638 aa4.09□□□□□ -1.76
ROD1YOR018W CYT1P07143 309 aa4.09□□□□□ -1.76
ROD1YOR018W SEC23P15303 768 aaKnown RBP4.09□□□□□ -1.76
ROD1YOR018W RPB10P22139 70 aa4.09□□□□□ -1.76
ROD1YOR018W DPH2P32461 534 aa4.09□□□□□ -1.76
ROD1YOR018W HEL1P36113 551 aa4.09□□□□□ -1.76
ROD1YOR018W YBR056WP38081 501 aa4.09□□□□□ -1.76
ROD1YOR018W LDH1P38139 375 aa4.09□□□□□ -1.76
ROD1YOR018W MCX1P38323 520 aaPredicted RBP4.09□□□□□ -1.76
ROD1YOR018W YHL026CP38740 315 aa4.09□□□□□ -1.76
ROD1YOR018W TCD1P38756 429 aa4.09□□□□□ -1.76
ROD1YOR018W CAJ1P39101 391 aa4.09□□□□□ -1.76
ROD1YOR018W SAP1P39955 897 aaKnown RBP4.09□□□□□ -1.76
ROD1YOR018W YER186CP40101 306 aa4.09□□□□□ -1.76
ROD1YOR018W ALY2P47029 1046 aa4.09□□□□□ -1.76
ROD1YOR018W GCV2P49095 1034 aa4.09□□□□□ -1.76
ROD1YOR018W ALT2P52892 507 aa4.09□□□□□ -1.76
ROD1YOR018W DRN1P53255 507 aaKnown RBP4.09□□□□□ -1.76
ROD1YOR018W ALF1P53904 254 aa4.09□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms