RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C SPT5P27692 1063 aaKnown RBP9.04□□□□□ -0.96
RPD3YNL330C STE13P33894 931 aa9.04□□□□□ -0.96
RPD3YNL330C SEG2P34250 1132 aa9.04□□□□□ -0.96
RPD3YNL330C OCT1P35999 772 aa9.04□□□□□ -0.96
RPD3YNL330C TVP38P36164 337 aa9.04□□□□□ -0.96
RPD3YNL330C YBR032WP38223 100 aa9.04□□□□□ -0.96
RPD3YNL330C FZO1P38297 855 aa9.04□□□□□ -0.96
RPD3YNL330C HSM3P38348 480 aa9.04□□□□□ -0.96
RPD3YNL330C SPC97P38863 823 aa9.04□□□□□ -0.96
RPD3YNL330C FET4P40988 552 aa9.04□□□□□ -0.96
RPD3YNL330C CTR1P49573 406 aa9.04□□□□□ -0.96
RPD3YNL330C TAF6P53040 516 aa9.04□□□□□ -0.96
RPD3YNL330C RIB2Q12362 591 aaKnown RBP9.04□□□□□ -0.96
RPD3YNL330C RRD2Q12461 358 aa9.04□□□□□ -0.96
RPD3YNL330C BI2P03873 423 aa9.03□□□□□ -0.96
RPD3YNL330C BI4P03879 638 aa9.03□□□□□ -0.96
RPD3YNL330C FBP1P09201 348 aa9.03□□□□□ -0.96
RPD3YNL330C COX11P19516 300 aaKnown RBP9.03□□□□□ -0.96
RPD3YNL330C IME1P21190 360 aa9.03□□□□□ -0.96
RPD3YNL330C VAN1P23642 535 aa9.03□□□□□ -0.96
RPD3YNL330C KAR4P25583 335 aa9.03□□□□□ -0.96
RPD3YNL330C MGT1P26188 188 aa9.03□□□□□ -0.96
RPD3YNL330C SSE1P32589 693 aaKnown RBP9.03□□□□□ -0.96
RPD3YNL330C SHP1P34223 423 aa9.03□□□□□ -0.96
RPD3YNL330C SBE2P42223 864 aaKnown RBP9.03□□□□□ -0.96
RPD3YNL330C EMW1P42842 904 aaKnown RBP9.03□□□□□ -0.96
RPD3YNL330C YJL007CP47080 104 aa9.03□□□□□ -0.96
RPD3YNL330C NNF2P53253 936 aa9.03□□□□□ -0.96
RPD3YNL330C YNL040WP53960 456 aaPredicted RBP9.03□□□□□ -0.96
RPD3YNL330C HOT1Q03213 719 aa9.03□□□□□ -0.96
RPD3YNL330C GNT1Q12096 491 aa9.03□□□□□ -0.96
RPD3YNL330C BI3Q9ZZW7 517 aa9.03□□□□□ -0.96
RPD3YNL330C DED1P06634 604 aaKnown RBP9.02□□□□□ -0.97
RPD3YNL330C YMR085WP0CF18 432 aa9.02□□□□□ -0.97
RPD3YNL330C YER152CP10356 443 aa9.02□□□□□ -0.97
RPD3YNL330C TPS2P31688 896 aaKnown RBP9.02□□□□□ -0.97
RPD3YNL330C DUG2P38149 878 aa9.02□□□□□ -0.97
RPD3YNL330C APM2P38700 605 aa9.02□□□□□ -0.97
RPD3YNL330C REV7P38927 245 aa9.02□□□□□ -0.97
RPD3YNL330C VAB2P40003 282 aa9.02□□□□□ -0.97
RPD3YNL330C TMN3P40071 706 aa9.02□□□□□ -0.97
RPD3YNL330C SCD6P45978 349 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97 RIP-Chip
RPD3YNL330C YJR142WP47173 342 aa9.02□□□□□ -0.97
RPD3YNL330C HLJ1P48353 224 aa9.02□□□□□ -0.97
RPD3YNL330C ASN1P49089 572 aaKnown RBP9.02□□□□□ -0.97
RPD3YNL330C FPK1P53739 893 aa9.02□□□□□ -0.97
RPD3YNL330C KTR5P53966 522 aaPredicted RBP9.02□□□□□ -0.97
RPD3YNL330C PRM6Q04705 352 aa9.02□□□□□ -0.97
RPD3YNL330C COQ9Q05779 260 aa9.02□□□□□ -0.97
RPD3YNL330C GPN2Q08726 347 aaPredicted RBP9.02□□□□□ -0.97
RPD3YNL330C AIM7Q12156 149 aa9.02□□□□□ -0.97
RPD3YNL330C YDR018CQ12185 396 aa9.02□□□□□ -0.97
RPD3YNL330C ECM3Q99252 613 aa9.02□□□□□ -0.97
RPD3YNL330C PWP1P21304 576 aaKnown RBP9.01□□□□□ -0.97
RPD3YNL330C SEC14P24280 304 aaKnown RBP9.01□□□□□ -0.97
RPD3YNL330C BUD14P27637 709 aa9.01□□□□□ -0.97
RPD3YNL330C UTR4P32626 227 aa9.01□□□□□ -0.97
RPD3YNL330C TOA1P32773 286 aa9.01□□□□□ -0.97
RPD3YNL330C GYP6P32806 458 aa9.01□□□□□ -0.97
RPD3YNL330C LIN1P38852 340 aaPredicted RBP9.01□□□□□ -0.97
RPD3YNL330C YEL025CP39991 1188 aa9.01□□□□□ -0.97
RPD3YNL330C ARG2P40360 574 aa9.01□□□□□ -0.97
RPD3YNL330C ALA1P40825 983 aaKnown RBP9.01□□□□□ -0.97
RPD3YNL330C SAE2P46946 345 aa9.01□□□□□ -0.97
RPD3YNL330C ORC5P50874 479 aa9.01□□□□□ -0.97
RPD3YNL330C HOP2P53187 214 aa9.01□□□□□ -0.97
RPD3YNL330C CUL3P53202 744 aa9.01□□□□□ -0.97
RPD3YNL330C YNL146WP53906 100 aa9.01□□□□□ -0.97
RPD3YNL330C YNL144CP53907 740 aa9.01□□□□□ -0.97
RPD3YNL330C YAF9P53930 226 aa9.01□□□□□ -0.97
RPD3YNL330C SXM1Q04175 944 aaKnown RBP9.01□□□□□ -0.97
RPD3YNL330C GTB1Q04924 702 aa9.01□□□□□ -0.97
RPD3YNL330C CDC73Q06697 393 aa9.01□□□□□ -0.97
RPD3YNL330C OSW1Q08692 278 aa9.01□□□□□ -0.97
RPD3YNL330C RAD10P06838 210 aa9□□□□□ -0.97
RPD3YNL330C RAD3P06839 778 aa9□□□□□ -0.97
RPD3YNL330C ILS1P09436 1072 aaKnown RBP9□□□□□ -0.97
RPD3YNL330C EST1P17214 699 aaPredicted RBP9□□□□□ -0.97
RPD3YNL330C TKL1P23254 680 aaKnown RBP9□□□□□ -0.97
RPD3YNL330C SCJ1P25303 377 aa9□□□□□ -0.97
RPD3YNL330C EFB1P32471 206 aaKnown RBP9□□□□□ -0.97
RPD3YNL330C TMT1P32643 299 aa9□□□□□ -0.97
RPD3YNL330C PCM1P38628 557 aaKnown RBP9□□□□□ -0.97
RPD3YNL330C MSR1P38714 643 aa9□□□□□ -0.97
RPD3YNL330C EAF5P39995 279 aa9□□□□□ -0.97
RPD3YNL330C SIP5P40210 489 aaKnown RBP9□□□□□ -0.97
RPD3YNL330C MDJ2P42834 146 aa9□□□□□ -0.97
RPD3YNL330C LIA1P47120 325 aaKnown RBP9□□□□□ -0.97
RPD3YNL330C PUS2P53167 370 aa9□□□□□ -0.97
RPD3YNL330C YPT6Q99260 215 aa9□□□□□ -0.97
RPD3YNL330C CDC19P00549 500 aaKnown RBP8.99□□□□□ -0.97
RPD3YNL330C CDC24P11433 854 aaPredicted RBP8.99□□□□□ -0.97
RPD3YNL330C VMA2P16140 517 aaKnown RBP8.99□□□□□ -0.97
RPD3YNL330C MRM1P25270 412 aa8.99□□□□□ -0.97
RPD3YNL330C COY1P34237 679 aa8.99□□□□□ -0.97
RPD3YNL330C PAM1P37304 830 aaKnown RBP8.99□□□□□ -0.97
RPD3YNL330C REG2P38232 338 aa8.99□□□□□ -0.97
RPD3YNL330C ERP5P38819 212 aa8.99□□□□□ -0.97
RPD3YNL330C GPB2P39717 880 aa8.99□□□□□ -0.97
RPD3YNL330C TMA108P40462 946 aa8.99□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms