RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	6.61	□□□□□ -1.35	not detected
CSL4	YNL232W	NNK1	P36003	928 aa		6.61	□□□□□ -1.35
CSL4	YNL232W	EXO5	P38289	585 aa		6.61	□□□□□ -1.35
CSL4	YNL232W	SUL1	P38359	859 aa		6.61	□□□□□ -1.35
CSL4	YNL232W	YHR202W	P38887	602 aa		6.61	□□□□□ -1.35
CSL4	YNL232W	CRG1	P38892	291 aa	RIP-Chip data	6.61	□□□□□ -1.35	not detected
CSL4	YNL232W	RVS167	P39743	482 aa	Known RBP	6.61	□□□□□ -1.35
CSL4	YNL232W	YNL134C	P53912	376 aa	Known RBP	6.61	□□□□□ -1.35
CSL4	YNL232W	GDE1	Q02979	1223 aa		6.61	□□□□□ -1.35
CSL4	YNL232W	TFC6	Q06339	672 aa		6.61	□□□□□ -1.35
CSL4	YNL232W	PIN2	Q12057	282 aa		6.61	□□□□□ -1.35
CSL4	YNL232W	RIM4	P38741	713 aa		6.6	□□□□□ -1.35
CSL4	YNL232W	PTC7	P38797	343 aa		6.6	□□□□□ -1.35
CSL4	YNL232W	ORC4	P54791	529 aa		6.6	□□□□□ -1.35
CSL4	YNL232W	MRI1	Q06489	411 aa	Known RBP	6.6	□□□□□ -1.35
CSL4	YNL232W	CRD1	Q07560	283 aa		6.6	□□□□□ -1.35
CSL4	YNL232W	ESC8	Q08119	714 aa		6.6	□□□□□ -1.35
CSL4	YNL232W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	6.6	□□□□□ -1.35	not detected
CSL4	YNL232W	CDC16	P09798	840 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	EFT1	P32324	842 aa	Known RBP	6.59	□□□□□ -1.35
CSL4	YNL232W	COY1	P34237	679 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	THI80	P35202	319 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	YKL077W	P36081	392 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	NEM1	P38757	446 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	YAP1801	P38856	637 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	TAF1	P46677	1066 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	ALT2	P52892	507 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	ZPR1	P53303	486 aa	Known RBP	6.59	□□□□□ -1.35
CSL4	YNL232W	NUT2	Q06213	157 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	PEX19	Q07418	342 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	NOC3	Q07896	663 aa	Predicted RBP	6.59	□□□□□ -1.35
CSL4	YNL232W	YBL113C	Q7M4S9	792 aa		6.59	□□□□□ -1.35
CSL4	YNL232W	ADE2	P21264	571 aa	Known RBP	6.58	□□□□□ -1.36
CSL4	YNL232W	CDC3	P32457	520 aa	Known RBP	6.58	□□□□□ -1.36
CSL4	YNL232W	PEX2	P32800	271 aa		6.58	□□□□□ -1.36
CSL4	YNL232W	CSE2	P33308	149 aa		6.58	□□□□□ -1.36
CSL4	YNL232W	GTS1	P40956	396 aa		6.58	□□□□□ -1.36
CSL4	YNL232W	ALG2	P43636	503 aa		6.58	□□□□□ -1.36
CSL4	YNL232W	PHM6	Q05637	104 aa		6.58	□□□□□ -1.36
CSL4	YNL232W	PUS7	Q08647	676 aa	Known RBP	6.58	□□□□□ -1.36
CSL4	YNL232W	YOR111W	Q99210	232 aa		6.58	□□□□□ -1.36
CSL4	YNL232W	IRA1	P18963	3092 aa		6.58	□□□□□ -1.36
CSL4	YNL232W	PGK1	P00560	416 aa	Known RBP	6.57	□□□□□ -1.36
CSL4	YNL232W	HIS5	P07172	385 aa		6.57	□□□□□ -1.36
CSL4	YNL232W	WHI2	P12611	486 aa		6.57	□□□□□ -1.36
CSL4	YNL232W	CDC48	P25694	835 aa	Known RBP	6.57	□□□□□ -1.36
CSL4	YNL232W	CCL1	P37366	393 aa		6.57	□□□□□ -1.36
CSL4	YNL232W	RFC1	P38630	861 aa	Known RBP	6.57	□□□□□ -1.36
CSL4	YNL232W	ZAP1	P47043	880 aa		6.57	□□□□□ -1.36
CSL4	YNL232W	YML053C	Q04978	212 aa		6.57	□□□□□ -1.36
CSL4	YNL232W	DED1	P06634	604 aa	Known RBP	6.56	□□□□□ -1.36
CSL4	YNL232W	NMD3	P38861	518 aa	Known RBP	6.56	□□□□□ -1.36
CSL4	YNL232W	FAA4	P47912	694 aa	Known RBP	6.56	□□□□□ -1.36
CSL4	YNL232W	TPP1	Q03796	238 aa		6.56	□□□□□ -1.36
CSL4	YNL232W	YOR022C	Q12204	715 aa		6.56	□□□□□ -1.36
CSL4	YNL232W	HIF1	Q12373	385 aa		6.56	□□□□□ -1.36
CSL4	YNL232W	MEX67	Q99257	599 aa	Known RBP	6.56	□□□□□ -1.36
CSL4	YNL232W	SPE1	P08432	466 aa		6.55	□□□□□ -1.36
CSL4	YNL232W	SGF29	P25554	259 aa		6.55	□□□□□ -1.36
CSL4	YNL232W	GPD2	P41911	440 aa	Known RBP	6.55	□□□□□ -1.36
CSL4	YNL232W	LAM5	P43560	674 aa		6.55	□□□□□ -1.36
CSL4	YNL232W	OYE2	Q03558	400 aa	Known RBP	6.55	□□□□□ -1.36
CSL4	YNL232W	NSE1	Q07913	336 aa		6.55	□□□□□ -1.36
CSL4	YNL232W	HFI1	Q12060	488 aa		6.55	□□□□□ -1.36
CSL4	YNL232W	YDL177C	Q12257	170 aa		6.55	□□□□□ -1.36
CSL4	YNL232W	MSB2	P32334	1306 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	CIT1	P00890	479 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	ADE4	P04046	510 aa	Known RBP	6.54	□□□□□ -1.36
CSL4	YNL232W	RPS14A	P06367	137 aa	Known RBP	6.54	□□□□□ -1.36
CSL4	YNL232W	HMG2	P12684	1045 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	PRP6	P19735	899 aa	Predicted RBP	6.54	□□□□□ -1.36
CSL4	YNL232W	RNR3	P21672	869 aa	Known RBP	6.54	□□□□□ -1.36
CSL4	YNL232W	RAD27	P26793	382 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	RPS14B	P39516	138 aa	Known RBP	6.54	□□□□□ -1.36
CSL4	YNL232W	YAR028W	P39548	234 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	EAF5	P39995	279 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	SAM37	P50110	327 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	YGL081W	P53156	320 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	YCS4	Q06156	1176 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	RIM20	Q12033	661 aa		6.54	□□□□□ -1.36
CSL4	YNL232W	PKH2	Q12236	1081 aa	Known RBP	6.54	□□□□□ -1.36
CSL4	YNL232W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.53	□□□□□ -1.36	not detected
CSL4	YNL232W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.53	□□□□□ -1.36	not detected
CSL4	YNL232W	MCM3	P24279	971 aa	Known RBP	6.53	□□□□□ -1.36
CSL4	YNL232W	IMP2'	P32351	346 aa		6.53	□□□□□ -1.36
CSL4	YNL232W	ECM32	P32644	1121 aa	Known RBP	6.53	□□□□□ -1.36
CSL4	YNL232W	SHU2	P38957	223 aa		6.53	□□□□□ -1.36
CSL4	YNL232W	CCT3	P39077	534 aa	Known RBP	6.53	□□□□□ -1.36
CSL4	YNL232W	GIP4	P39732	760 aa		6.53	□□□□□ -1.36
CSL4	YNL232W	VID28	P40547	921 aa		6.53	□□□□□ -1.36
CSL4	YNL232W	TAM41	P53230	385 aa		6.53	□□□□□ -1.36
CSL4	YNL232W	SFB2	P53953	876 aa		6.53	□□□□□ -1.36
CSL4	YNL232W	NOG1	Q02892	647 aa	Known RBP	6.53	□□□□□ -1.36
CSL4	YNL232W	COQ9	Q05779	260 aa		6.53	□□□□□ -1.36
CSL4	YNL232W	EST2	Q06163	884 aa		6.53	□□□□□ -1.36
CSL4	YNL232W	HOM2	P13663	365 aa	Known RBP	6.52	□□□□□ -1.37
CSL4	YNL232W	RSA4	P25382	515 aa	Known RBP	6.52	□□□□□ -1.37
CSL4	YNL232W	TMT1	P32643	299 aa		6.52	□□□□□ -1.37
CSL4	YNL232W	AIM3	P38266	947 aa	Known RBP	6.52	□□□□□ -1.37
CSL4	YNL232W	PCM1	P38628	557 aa	Known RBP	6.52	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms