RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W YEL1P34225 687 aa3.72□□□□□ -1.81
DDR48YMR173W YKR018CP36114 725 aa3.72□□□□□ -1.81
DDR48YMR173W APT2P36973 181 aa3.72□□□□□ -1.81
DDR48YMR173W FMO1P38866 432 aa3.72□□□□□ -1.81
DDR48YMR173W NUP60P39705 539 aa3.72□□□□□ -1.81
DDR48YMR173W ARG2P40360 574 aa3.72□□□□□ -1.81
DDR48YMR173W CTR1P49573 406 aa3.72□□□□□ -1.81
DDR48YMR173W MTL1P53214 551 aa3.72□□□□□ -1.81
DDR48YMR173W CLF1Q12309 687 aaPredicted RBP3.72□□□□□ -1.81
DDR48YMR173W HRP1Q99383 534 aaKnown RBP3.72□□□□□ -1.81
DDR48YMR173W MEF1P25039 761 aa3.71□□□□□ -1.82
DDR48YMR173W MVD1P32377 396 aaKnown RBP3.71□□□□□ -1.82
DDR48YMR173W HOG1P32485 435 aa3.71□□□□□ -1.82
DDR48YMR173W HSL7P38274 827 aa3.71□□□□□ -1.82
DDR48YMR173W NUP82P40368 713 aa3.71□□□□□ -1.82
DDR48YMR173W YFL052WP43551 465 aa3.71□□□□□ -1.82
DDR48YMR173W REC102Q02721 264 aa3.71□□□□□ -1.82
DDR48YMR173W NHX1Q04121 633 aa3.71□□□□□ -1.82
DDR48YMR173W SRD1P09007 221 aa3.7□□□□□ -1.82
DDR48YMR173W UBC9P50623 157 aaPredicted RBP3.7□□□□□ -1.82
DDR48YMR173W PAN2P53010 1115 aaPredicted RBP3.7□□□□□ -1.82
DDR48YMR173W PCL10P53124 433 aa3.7□□□□□ -1.82
DDR48YMR173W NPY1P53164 384 aa3.7□□□□□ -1.82
DDR48YMR173W PHO8P11491 566 aa3.69□□□□□ -1.82
DDR48YMR173W PEX1P24004 1043 aa3.69□□□□□ -1.82
DDR48YMR173W VBA3P25594 458 aa3.69□□□□□ -1.82
DDR48YMR173W YKR051WP36142 418 aa3.69□□□□□ -1.82
DDR48YMR173W SFB3P38810 929 aa3.69□□□□□ -1.82
DDR48YMR173W HRB1P38922 454 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
DDR48YMR173W MRK1P50873 501 aa3.69□□□□□ -1.82
DDR48YMR173W ATG4P53867 494 aa3.69□□□□□ -1.82
DDR48YMR173W RPN7Q06103 429 aaKnown RBP3.69□□□□□ -1.82
DDR48YMR173W Q0142Q9ZZW4 58 aa3.69□□□□□ -1.82
DDR48YMR173W PTP1P25044 335 aa3.68□□□□□ -1.82
DDR48YMR173W ERG6P25087 383 aaKnown RBP3.68□□□□□ -1.82
DDR48YMR173W SEC6P32844 805 aa3.68□□□□□ -1.82
DDR48YMR173W PEX6P33760 1030 aa3.68□□□□□ -1.82
DDR48YMR173W GET2P40056 285 aa3.68□□□□□ -1.82
DDR48YMR173W RGT2Q12300 763 aa3.68□□□□□ -1.82
DDR48YMR173W RNR1P21524 888 aaKnown RBP3.67□□□□□ -1.82
DDR48YMR173W PHO11P35842 467 aa3.67□□□□□ -1.82
DDR48YMR173W PHO12P38693 467 aa3.67□□□□□ -1.82
DDR48YMR173W CRP1P38845 465 aaKnown RBP3.67□□□□□ -1.82
DDR48YMR173W DSS1P39112 969 aa3.67□□□□□ -1.82
DDR48YMR173W LTP1P40347 161 aa3.67□□□□□ -1.82
DDR48YMR173W NET1P47035 1189 aa3.67□□□□□ -1.82
DDR48YMR173W ARP4P80428 489 aa3.67□□□□□ -1.82
DDR48YMR173W CIT2P08679 460 aa3.66□□□□□ -1.82
DDR48YMR173W THR1P17423 357 aaKnown RBP3.66□□□□□ -1.82
DDR48YMR173W PCL2P25693 308 aa3.66□□□□□ -1.82
DDR48YMR173W OSW7P43611 510 aa3.66□□□□□ -1.82
DDR48YMR173W NOP9P47077 666 aaKnown RBP3.66□□□□□ -1.82
DDR48YMR173W ORC1P54784 914 aaPredicted RBP3.66□□□□□ -1.82
DDR48YMR173W POB3Q04636 552 aaKnown RBP3.66□□□□□ -1.82
DDR48YMR173W RGC1Q06108 1083 aaKnown RBP3.66□□□□□ -1.82
DDR48YMR173W ATG33Q06485 197 aa3.66□□□□□ -1.82
DDR48YMR173W THI22Q06490 572 aa3.66□□□□□ -1.82
DDR48YMR173W MLH3Q12083 715 aa3.66□□□□□ -1.82
DDR48YMR173W ERG11P10614 530 aa3.65□□□□□ -1.83
DDR48YMR173W PRP28P23394 588 aa3.65□□□□□ -1.83
DDR48YMR173W CCR4P31384 837 aaKnown RBP3.65□□□□□ -1.83
DDR48YMR173W THI4P32318 326 aa3.65□□□□□ -1.83
DDR48YMR173W APN2P38207 520 aa3.65□□□□□ -1.83
DDR48YMR173W PCM1P38628 557 aaKnown RBP3.65□□□□□ -1.83
DDR48YMR173W MUP3P38734 546 aa3.65□□□□□ -1.83
DDR48YMR173W SSZ1P38788 538 aaKnown RBP3.65□□□□□ -1.83
DDR48YMR173W SET2P46995 733 aaKnown RBP3.65□□□□□ -1.83
DDR48YMR173W YJR039WP47107 1121 aa3.65□□□□□ -1.83
DDR48YMR173W BPL1P48445 690 aaPredicted RBP3.65□□□□□ -1.83
DDR48YMR173W FPR4Q06205 392 aaPredicted RBP3.65□□□□□ -1.83
DDR48YMR173W ZRT2Q12436 422 aa3.65□□□□□ -1.83
DDR48YMR173W YTA7P40340 1379 aa3.64□□□□□ -1.83
DDR48YMR173W YPT7P32939 208 aa3.64□□□□□ -1.83
DDR48YMR173W BIT2P38346 545 aa3.64□□□□□ -1.83
DDR48YMR173W XBP1P40489 647 aa3.64□□□□□ -1.83
DDR48YMR173W RSC8P43609 557 aaKnown RBP3.64□□□□□ -1.83
DDR48YMR173W BRE5P53741 515 aaKnown RBP3.64□□□□□ -1.83
DDR48YMR173W MPS1P54199 764 aa3.64□□□□□ -1.83
DDR48YMR173W LEE1Q02799 301 aaKnown RBP3.64□□□□□ -1.83
DDR48YMR173W YLR001CQ07895 862 aa3.64□□□□□ -1.83
DDR48YMR173W SLK19Q08581 821 aaKnown RBP3.64□□□□□ -1.83
DDR48YMR173W PGK1P00560 416 aaKnown RBP3.63□□□□□ -1.83
DDR48YMR173W HMG1P12683 1054 aa3.63□□□□□ -1.83
DDR48YMR173W AKL1P38080 1108 aaKnown RBP3.63□□□□□ -1.83
DDR48YMR173W STB2P46679 850 aa3.63□□□□□ -1.83
DDR48YMR173W NTG2Q08214 380 aa3.63□□□□□ -1.83
DDR48YMR173W DIA2Q08496 732 aaPredicted RBP3.63□□□□□ -1.83
DDR48YMR173W CIR2Q08822 631 aa3.63□□□□□ -1.83
DDR48YMR173W BMS1Q08965 1183 aaKnown RBP3.63□□□□□ -1.83
DDR48YMR173W USV1Q12132 391 aa3.63□□□□□ -1.83
DDR48YMR173W RAD18P10862 487 aa3.62□□□□□ -1.83
DDR48YMR173W FUB1P25659 250 aa3.62□□□□□ -1.83
DDR48YMR173W BCS1P32839 456 aa3.62□□□□□ -1.83
DDR48YMR173W BEM4P39011 633 aa3.62□□□□□ -1.83
DDR48YMR173W PIG2P40187 538 aa3.62□□□□□ -1.83
DDR48YMR173W TDA9Q04545 1251 aa3.62□□□□□ -1.83
DDR48YMR173W DCS2Q12123 353 aa3.62□□□□□ -1.83
DDR48YMR173W GIN4Q12263 1142 aa3.62□□□□□ -1.83
DDR48YMR173W SFL1P20134 766 aa3.61□□□□□ -1.83
DDR48YMR173W MNN4P36044 1178 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms