RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W MED6P38782 295 aa8.16□□□□□ -1.1
NUP53YMR153W BTT1P40314 149 aaPredicted RBP8.16□□□□□ -1.1
NUP53YMR153W SFB2P53953 876 aa8.16□□□□□ -1.1
NUP53YMR153W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
NUP53YMR153W GCN5Q03330 439 aa8.16□□□□□ -1.1
NUP53YMR153W PPM1Q04081 328 aa8.16□□□□□ -1.1
NUP53YMR153W CSR1Q06705 408 aaKnown RBP8.16□□□□□ -1.1
NUP53YMR153W SIR1P21691 654 aa8.15□□□□□ -1.1
NUP53YMR153W DAL2P25335 343 aa8.15□□□□□ -1.1
NUP53YMR153W TSA1P34760 196 aaKnown RBP8.15□□□□□ -1.1
NUP53YMR153W YET1P35723 206 aa8.15□□□□□ -1.1
NUP53YMR153W SPT8P38915 602 aa8.15□□□□□ -1.1
NUP53YMR153W DSE1P40077 573 aa8.15□□□□□ -1.1
NUP53YMR153W DRN1P53255 507 aaKnown RBP8.15□□□□□ -1.1
NUP53YMR153W YPQ1Q12010 308 aa8.15□□□□□ -1.1
NUP53YMR153W NDJ1Q12366 352 aa8.15□□□□□ -1.1
NUP53YMR153W RPS14AP06367 137 aaKnown RBP8.14□□□□□ -1.11
NUP53YMR153W HIS5P07172 385 aa8.14□□□□□ -1.11
NUP53YMR153W FUS1P11710 512 aa8.14□□□□□ -1.11
NUP53YMR153W STE11P23561 717 aa8.14□□□□□ -1.11
NUP53YMR153W XRS2P33301 854 aa8.14□□□□□ -1.11
NUP53YMR153W SEG2P34250 1132 aa8.14□□□□□ -1.11
NUP53YMR153W NOP4P37838 685 aaKnown RBP8.14□□□□□ -1.11
NUP53YMR153W POL12P38121 705 aaPredicted RBP8.14□□□□□ -1.11
NUP53YMR153W ARP1P38696 384 aa8.14□□□□□ -1.11
NUP53YMR153W RAD55P38953 406 aa8.14□□□□□ -1.11
NUP53YMR153W RPS14BP39516 138 aaKnown RBP8.14□□□□□ -1.11
NUP53YMR153W GUF1P46943 645 aa8.14□□□□□ -1.11
NUP53YMR153W ZAP1P47043 880 aa8.14□□□□□ -1.11
NUP53YMR153W MTD1Q02046 320 aaKnown RBP8.14□□□□□ -1.11
NUP53YMR153W NSE1Q07913 336 aa8.14□□□□□ -1.11
NUP53YMR153W PDH1Q12428 516 aaKnown RBP8.14□□□□□ -1.11
NUP53YMR153W AI5_BETAQ9ZZX0 354 aa8.14□□□□□ -1.11
NUP53YMR153W MTF1P14908 341 aaKnown RBP8.13□□□□□ -1.11
NUP53YMR153W KIP1P28742 1111 aa8.13□□□□□ -1.11
NUP53YMR153W AVT2P39981 480 aa8.13□□□□□ -1.11
NUP53YMR153W YGL036WP53185 909 aaPredicted RBP8.13□□□□□ -1.11
NUP53YMR153W CEG1Q01159 459 aaPredicted RBP8.13□□□□□ -1.11
NUP53YMR153W TMN2Q04562 672 aa8.13□□□□□ -1.11
NUP53YMR153W DDC1Q08949 612 aa8.13□□□□□ -1.11
NUP53YMR153W NBP2Q12163 236 aa8.13□□□□□ -1.11
NUP53YMR153W BEM2P39960 2167 aaKnown RBP8.13□□□□□ -1.11
NUP53YMR153W DAL1P32375 460 aa8.12□□□□□ -1.11
NUP53YMR153W RPN12P32496 274 aa8.12□□□□□ -1.11
NUP53YMR153W NIP100P33420 868 aa8.12□□□□□ -1.11
NUP53YMR153W CSG2P35206 410 aa8.12□□□□□ -1.11
NUP53YMR153W EFM2P38347 419 aa8.12□□□□□ -1.11
NUP53YMR153W VTC4P47075 721 aa8.12□□□□□ -1.11
NUP53YMR153W BSP1Q06604 576 aa8.12□□□□□ -1.11
NUP53YMR153W PPH22P23595 377 aa8.12□□□□□ -1.11
NUP53YMR153W PSY4P38193 441 aa8.12□□□□□ -1.11
NUP53YMR153W NUP60P39705 539 aa8.12□□□□□ -1.11
NUP53YMR153W CDC1P40986 491 aa8.12□□□□□ -1.11
NUP53YMR153W PFD1P46988 109 aa8.12□□□□□ -1.11
NUP53YMR153W VPS70P47161 811 aa8.12□□□□□ -1.11
NUP53YMR153W MND1P53102 219 aa8.12□□□□□ -1.11
NUP53YMR153W GPD1Q00055 391 aaKnown RBP8.12□□□□□ -1.11
NUP53YMR153W YML082WQ04533 649 aaKnown RBP8.12□□□□□ -1.11
NUP53YMR153W ECM22Q05958 814 aaPredicted RBP8.12□□□□□ -1.11
NUP53YMR153W TMA16Q08687 178 aa8.12□□□□□ -1.11
NUP53YMR153W TRE1Q08919 783 aa8.12□□□□□ -1.11
NUP53YMR153W SCJ1P25303 377 aa8.11□□□□□ -1.11
NUP53YMR153W MSP1P28737 362 aa8.11□□□□□ -1.11
NUP53YMR153W ISF1P32488 338 aa8.11□□□□□ -1.11
NUP53YMR153W YBR225WP38321 900 aa8.11□□□□□ -1.11
NUP53YMR153W MIP6P38760 659 aaKnown RBP8.11□□□□□ -1.11
NUP53YMR153W DYS1P38791 387 aa8.11□□□□□ -1.11
NUP53YMR153W RPT2P40327 437 aaKnown RBP8.11□□□□□ -1.11
NUP53YMR153W CHS6P40955 746 aa8.11□□□□□ -1.11
NUP53YMR153W GYP8P43570 497 aa8.11□□□□□ -1.11
NUP53YMR153W TUB4P53378 473 aa8.11□□□□□ -1.11
NUP53YMR153W CWC2Q12046 339 aaPredicted RBP8.11□□□□□ -1.11
NUP53YMR153W JIP3O13555 125 aa8.1□□□□□ -1.11
NUP53YMR153W TRP2P00899 507 aaKnown RBP8.1□□□□□ -1.11
NUP53YMR153W PDC6P26263 563 aaKnown RBP8.1□□□□□ -1.11
NUP53YMR153W DSS4P32601 143 aa8.1□□□□□ -1.11
NUP53YMR153W CBR1P38626 284 aaKnown RBP8.1□□□□□ -1.11
NUP53YMR153W FHL1P39521 936 aa8.1□□□□□ -1.11
NUP53YMR153W ATH1P48016 1211 aa8.1□□□□□ -1.11
NUP53YMR153W YNR061CP53747 219 aa8.1□□□□□ -1.11
NUP53YMR153W ARO80Q04052 950 aa8.1□□□□□ -1.11
NUP53YMR153W RCL1Q08096 367 aaPredicted RBP8.1□□□□□ -1.11
NUP53YMR153W MDM38Q08179 573 aa8.1□□□□□ -1.11
NUP53YMR153W CDC33P07260 213 aaKnown RBP8.09□□□□□ -1.11
NUP53YMR153W YER152CP10356 443 aa8.09□□□□□ -1.11
NUP53YMR153W ATE1P16639 503 aa8.09□□□□□ -1.11
NUP53YMR153W MRM1P25270 412 aa8.09□□□□□ -1.11
NUP53YMR153W MSH3P25336 1018 aa8.09□□□□□ -1.11
NUP53YMR153W SMC1P32908 1225 aa8.09□□□□□ -1.11
NUP53YMR153W YIL161WP40449 235 aaKnown RBP8.09□□□□□ -1.11
NUP53YMR153W ASG7P46993 209 aa8.09□□□□□ -1.11
NUP53YMR153W FAA4P47912 694 aaKnown RBP8.09□□□□□ -1.11
NUP53YMR153W HFM1P51979 1187 aa8.09□□□□□ -1.11
NUP53YMR153W IMP4P53941 290 aaKnown RBP8.09□□□□□ -1.11
NUP53YMR153W HRD3Q05787 833 aa8.09□□□□□ -1.11
NUP53YMR153W YPR078CQ06813 372 aa8.09□□□□□ -1.11
NUP53YMR153W VPS54Q12071 889 aa8.09□□□□□ -1.11
NUP53YMR153W MEX67Q99257 599 aaKnown RBP8.09□□□□□ -1.11
NUP53YMR153W RPS9AO13516 197 aaKnown RBP8.08□□□□□ -1.12
NUP53YMR153W PPR1P07272 904 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms