RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W YJL107CP42947 387 aa5.57□□□□□ -1.52
SPG4YMR107W IOC3P43596 787 aa5.57□□□□□ -1.52
SPG4YMR107W IRC8P47046 822 aa5.57□□□□□ -1.52
SPG4YMR107W RFX1P48743 811 aa5.57□□□□□ -1.52
SPG4YMR107W DRN1P53255 507 aaKnown RBP5.57□□□□□ -1.52
SPG4YMR107W PUS6P53294 404 aa5.57□□□□□ -1.52
SPG4YMR107W NAF1P53919 492 aaKnown RBP5.57□□□□□ -1.52
SPG4YMR107W HPC2Q01448 625 aa5.57□□□□□ -1.52
SPG4YMR107W MDM1Q01846 1127 aa5.57□□□□□ -1.52
SPG4YMR107W LGE1Q02796 332 aaKnown RBP5.57□□□□□ -1.52
SPG4YMR107W PLP1Q04004 230 aa5.57□□□□□ -1.52
SPG4YMR107W GPI17Q04080 534 aa5.57□□□□□ -1.52
SPG4YMR107W ERB1Q04660 807 aaKnown RBP5.57□□□□□ -1.52
SPG4YMR107W GTB1Q04924 702 aa5.57□□□□□ -1.52
SPG4YMR107W ADY4Q05955 493 aa5.57□□□□□ -1.52
SPG4YMR107W ATG26Q06321 1198 aa5.57□□□□□ -1.52
SPG4YMR107W PSR1Q07800 427 aa5.57□□□□□ -1.52
SPG4YMR107W DNL4Q08387 944 aaPredicted RBP5.57□□□□□ -1.52
SPG4YMR107W PHM7Q12252 991 aa5.57□□□□□ -1.52
SPG4YMR107W ZRT2Q12436 422 aa5.57□□□□□ -1.52
SPG4YMR107W RTP1Q12751 981 aa5.57□□□□□ -1.52
SPG4YMR107W TY4B-PA0A0B7P3V8 1104 aa5.56□□□□□ -1.52
SPG4YMR107W YLR462WO13556 202 aa5.56□□□□□ -1.52
SPG4YMR107W ATP2P00830 511 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W GCR1P07261 785 aa5.56□□□□□ -1.52
SPG4YMR107W MOD5P07884 428 aa5.56□□□□□ -1.52
SPG4YMR107W SWI6P09959 803 aa5.56□□□□□ -1.52
SPG4YMR107W TEC1P18412 486 aa5.56□□□□□ -1.52
SPG4YMR107W EXO70P19658 623 aa5.56□□□□□ -1.52
SPG4YMR107W CNA1P23287 553 aa5.56□□□□□ -1.52
SPG4YMR107W RPC53P25441 422 aa5.56□□□□□ -1.52
SPG4YMR107W RPC19P28000 142 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W TRK2P28584 889 aa5.56□□□□□ -1.52
SPG4YMR107W TPS2P31688 896 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W NPL6P32832 435 aa5.56□□□□□ -1.52
SPG4YMR107W RPC37P36121 282 aa5.56□□□□□ -1.52
SPG4YMR107W PAM1P37304 830 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W PBP2P38151 413 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SPG4YMR107W DIA4P38705 446 aaPredicted RBP5.56□□□□□ -1.52
SPG4YMR107W YHL049CP38722 271 aa5.56□□□□□ -1.52
SPG4YMR107W GGA2P38817 585 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W NPT1P39683 429 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W YEL075CP39972 122 aa5.56□□□□□ -1.52
SPG4YMR107W YER189WP40104 122 aa5.56□□□□□ -1.52
SPG4YMR107W PDS1P40316 373 aaPredicted RBP5.56□□□□□ -1.52
SPG4YMR107W YFL064CP43540 174 aa5.56□□□□□ -1.52
SPG4YMR107W SAD1P43589 448 aa5.56□□□□□ -1.52
SPG4YMR107W STB2P46679 850 aa5.56□□□□□ -1.52
SPG4YMR107W BNA3P47039 444 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W ECL1P48235 211 aa5.56□□□□□ -1.52
SPG4YMR107W SHE4P51534 789 aa5.56□□□□□ -1.52
SPG4YMR107W CPR6P53691 371 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W TOF1P53840 1238 aa5.56□□□□□ -1.52
SPG4YMR107W RMT2Q03305 412 aa5.56□□□□□ -1.52
SPG4YMR107W GIS4Q04233 774 aa5.56□□□□□ -1.52
SPG4YMR107W ATG17Q06410 417 aa5.56□□□□□ -1.52
SPG4YMR107W ATG13Q06628 738 aa5.56□□□□□ -1.52
SPG4YMR107W YPR097WQ06839 1073 aa5.56□□□□□ -1.52
SPG4YMR107W RPN8Q08723 338 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W TIP41Q12199 356 aa5.56□□□□□ -1.52
SPG4YMR107W SNU66Q12420 587 aaPredicted RBP5.56□□□□□ -1.52
SPG4YMR107W YDL206WQ12424 762 aa5.56□□□□□ -1.52
SPG4YMR107W HTZ1Q12692 134 aaKnown RBP5.56□□□□□ -1.52
SPG4YMR107W YBL111CQ3E7Y5 667 aa5.56□□□□□ -1.52
SPG4YMR107W PGK1P00560 416 aaKnown RBP5.55□□□□□ -1.52
SPG4YMR107W ARG82P07250 355 aa5.55□□□□□ -1.52
SPG4YMR107W MPH2P0CD99 609 aa5.55□□□□□ -1.52
SPG4YMR107W MAK16P10962 306 aaPredicted RBP5.55□□□□□ -1.52
SPG4YMR107W STF2P16965 84 aa5.55□□□□□ -1.52
SPG4YMR107W PRO3P32263 286 aaKnown RBP5.55□□□□□ -1.52
SPG4YMR107W PTH2P34222 208 aa5.55□□□□□ -1.52
SPG4YMR107W SEG2P34250 1132 aa5.55□□□□□ -1.52
SPG4YMR107W ECM2P38241 364 aaKnown RBP5.55□□□□□ -1.52
SPG4YMR107W PFF1P38244 976 aa5.55□□□□□ -1.52
SPG4YMR107W RIC1P40395 1056 aa5.55□□□□□ -1.52
SPG4YMR107W DPH1P40487 425 aaKnown RBP5.55□□□□□ -1.52
SPG4YMR107W ATG36P46983 293 aa5.55□□□□□ -1.52
SPG4YMR107W TAF6P53040 516 aa5.55□□□□□ -1.52
SPG4YMR107W NUT1P53114 1132 aa5.55□□□□□ -1.52
SPG4YMR107W KXD1P53158 218 aa5.55□□□□□ -1.52
SPG4YMR107W NMA2P53204 395 aa5.55□□□□□ -1.52
SPG4YMR107W COG6P53959 839 aa5.55□□□□□ -1.52
SPG4YMR107W DAK1P54838 584 aaKnown RBP5.55□□□□□ -1.52
SPG4YMR107W UTP6Q02354 440 aaKnown RBP5.55□□□□□ -1.52
SPG4YMR107W SHR3Q02774 210 aa5.55□□□□□ -1.52
SPG4YMR107W COQ9Q05779 260 aa5.55□□□□□ -1.52
SPG4YMR107W YDL057WQ07379 328 aa5.55□□□□□ -1.52
SPG4YMR107W TSR1Q07381 788 aaKnown RBP5.55□□□□□ -1.52
SPG4YMR107W YDL114WQ07530 308 aa5.55□□□□□ -1.52
SPG4YMR107W RLP24Q07915 199 aaKnown RBP5.55□□□□□ -1.52
SPG4YMR107W VIK1Q12045 647 aa5.55□□□□□ -1.52
SPG4YMR107W SLX4Q12098 748 aa5.55□□□□□ -1.52
SPG4YMR107W THS1P04801 734 aaKnown RBP5.54□□□□□ -1.52
SPG4YMR107W TUB1P09733 447 aaKnown RBP5.54□□□□□ -1.52
SPG4YMR107W STE6P12866 1290 aa5.54□□□□□ -1.52
SPG4YMR107W URE2P23202 354 aaKnown RBP5.54□□□□□ -1.52
SPG4YMR107W ITR2P30606 609 aa5.54□□□□□ -1.52
SPG4YMR107W SSE1P32589 693 aaKnown RBP5.54□□□□□ -1.52
SPG4YMR107W SMC1P32908 1225 aa5.54□□□□□ -1.52
SPG4YMR107W BLI1P35727 113 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms