RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W CRP1P38845 465 aaKnown RBP3.72□□□□□ -1.81
PDP3YLR455W LYS9P38999 446 aa3.72□□□□□ -1.81
PDP3YLR455W UBP12P39538 1254 aa3.72□□□□□ -1.81
PDP3YLR455W SDS3P40505 327 aa3.72□□□□□ -1.81
PDP3YLR455W RET2P43621 546 aa3.72□□□□□ -1.81
PDP3YLR455W YJR096WP47137 282 aa3.72□□□□□ -1.81
PDP3YLR455W GPD1Q00055 391 aaKnown RBP3.72□□□□□ -1.81
PDP3YLR455W LEE1Q02799 301 aaKnown RBP3.72□□□□□ -1.81
PDP3YLR455W CTK1Q03957 528 aaKnown RBP3.72□□□□□ -1.81
PDP3YLR455W HRP1Q99383 534 aaKnown RBP3.72□□□□□ -1.81
PDP3YLR455W PEX1P24004 1043 aa3.71□□□□□ -1.82
PDP3YLR455W SEC6P32844 805 aa3.71□□□□□ -1.82
PDP3YLR455W TYS1P36421 394 aaKnown RBP3.71□□□□□ -1.82
PDP3YLR455W BCD1P38772 366 aa3.71□□□□□ -1.82
PDP3YLR455W CCT3P39077 534 aaKnown RBP3.71□□□□□ -1.82
PDP3YLR455W FMP52P40008 231 aa3.71□□□□□ -1.82
PDP3YLR455W GPG1P53130 126 aa3.71□□□□□ -1.82
PDP3YLR455W RIA1P53893 1110 aa3.71□□□□□ -1.82
PDP3YLR455W UME1Q03010 460 aa3.71□□□□□ -1.82
PDP3YLR455W MTQ2Q03920 221 aaPredicted RBP3.71□□□□□ -1.82
PDP3YLR455W SGO1Q08490 590 aa3.71□□□□□ -1.82
PDP3YLR455W APM4Q99186 491 aa3.71□□□□□ -1.82
PDP3YLR455W ERG6P25087 383 aaKnown RBP3.7□□□□□ -1.82
PDP3YLR455W NUP60P39705 539 aa3.7□□□□□ -1.82
PDP3YLR455W ATF1P40353 525 aa3.7□□□□□ -1.82
PDP3YLR455W GZF3P42944 551 aaKnown RBP3.7□□□□□ -1.82
PDP3YLR455W NOP9P47077 666 aaKnown RBP3.7□□□□□ -1.82
PDP3YLR455W MTL1P53214 551 aa3.7□□□□□ -1.82
PDP3YLR455W YAP1802P53309 568 aa3.7□□□□□ -1.82
PDP3YLR455W HFD1Q04458 532 aa3.7□□□□□ -1.82
PDP3YLR455W IRC13Q08630 104 aa3.7□□□□□ -1.82
PDP3YLR455W SWI6P09959 803 aa3.69□□□□□ -1.82
PDP3YLR455W PYC1P11154 1178 aaKnown RBP3.69□□□□□ -1.82
PDP3YLR455W RNR1P21524 888 aaKnown RBP3.69□□□□□ -1.82
PDP3YLR455W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
PDP3YLR455W HIR1P32479 840 aa3.69□□□□□ -1.82
PDP3YLR455W DID4P36108 232 aa3.69□□□□□ -1.82
PDP3YLR455W REV7P38927 245 aa3.69□□□□□ -1.82
PDP3YLR455W NUG1P40010 520 aaKnown RBP3.69□□□□□ -1.82
PDP3YLR455W GPP1P41277 250 aaKnown RBP3.69□□□□□ -1.82
PDP3YLR455W MNN11P46985 422 aaKnown RBP3.69□□□□□ -1.82
PDP3YLR455W YTM1Q12024 460 aaPredicted RBP3.69□□□□□ -1.82
PDP3YLR455W MRH1Q12117 320 aaPredicted RBP3.69□□□□□ -1.82
PDP3YLR455W CLF1Q12309 687 aaPredicted RBP3.69□□□□□ -1.82
PDP3YLR455W PRP19P32523 503 aaKnown RBP3.68□□□□□ -1.82
PDP3YLR455W FMO1P38866 432 aa3.68□□□□□ -1.82
PDP3YLR455W YHR202WP38887 602 aa3.68□□□□□ -1.82
PDP3YLR455W HXT6P39003 570 aaKnown RBP3.68□□□□□ -1.82
PDP3YLR455W HXT7P39004 570 aa3.68□□□□□ -1.82
PDP3YLR455W GET2P40056 285 aa3.68□□□□□ -1.82
PDP3YLR455W RSC8P43609 557 aaKnown RBP3.68□□□□□ -1.82
PDP3YLR455W TEL2P53038 688 aa3.68□□□□□ -1.82
PDP3YLR455W FHN1P53279 174 aa3.68□□□□□ -1.82
PDP3YLR455W ECM9Q02202 377 aa3.68□□□□□ -1.82
PDP3YLR455W THI22Q06490 572 aa3.68□□□□□ -1.82
PDP3YLR455W HFI1Q12060 488 aa3.68□□□□□ -1.82
PDP3YLR455W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
PDP3YLR455W YKL033W-AQ86ZR7 236 aa3.68□□□□□ -1.82
PDP3YLR455W PET127P32606 800 aa3.67□□□□□ -1.82
PDP3YLR455W GRX4P32642 244 aa3.67□□□□□ -1.82
PDP3YLR455W CUE2P36075 443 aaKnown RBP3.67□□□□□ -1.82
PDP3YLR455W TDA3P38758 523 aa3.67□□□□□ -1.82
PDP3YLR455W PCL5P38794 229 aa3.67□□□□□ -1.82
PDP3YLR455W OAF1P39720 1047 aaPredicted RBP3.67□□□□□ -1.82
PDP3YLR455W YGR237CP50089 785 aa3.67□□□□□ -1.82
PDP3YLR455W LGE1Q02796 332 aaKnown RBP3.67□□□□□ -1.82
PDP3YLR455W DIA2Q08496 732 aaPredicted RBP3.67□□□□□ -1.82
PDP3YLR455W PRP28P23394 588 aa3.66□□□□□ -1.82
PDP3YLR455W YKU70P32807 602 aa3.66□□□□□ -1.82
PDP3YLR455W HIS7P33734 552 aaKnown RBP3.66□□□□□ -1.82
PDP3YLR455W YKR075CP36155 307 aa3.66□□□□□ -1.82
PDP3YLR455W DUG1P43616 481 aaKnown RBP3.66□□□□□ -1.82
PDP3YLR455W SMX3P54999 86 aaPredicted RBP3.66□□□□□ -1.82
PDP3YLR455W SSL2Q00578 843 aa3.66□□□□□ -1.82
PDP3YLR455W ISA1Q07821 250 aaPredicted RBP3.66□□□□□ -1.82
PDP3YLR455W VHS3Q08438 674 aa3.66□□□□□ -1.82
PDP3YLR455W FRS1P15624 595 aaKnown RBP3.65□□□□□ -1.83
PDP3YLR455W IME1P21190 360 aa3.65□□□□□ -1.83
PDP3YLR455W IMG2P25642 146 aaPredicted RBP3.65□□□□□ -1.83
PDP3YLR455W OAF3P36023 863 aa3.65□□□□□ -1.83
PDP3YLR455W BIT2P38346 545 aa3.65□□□□□ -1.83
PDP3YLR455W PAF1P38351 445 aa3.65□□□□□ -1.83
PDP3YLR455W HRB1P38922 454 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
PDP3YLR455W BIT61P47041 543 aa3.65□□□□□ -1.83
PDP3YLR455W BFA1P47113 574 aa3.65□□□□□ -1.83
PDP3YLR455W YGR153WP48238 217 aa3.65□□□□□ -1.83
PDP3YLR455W PAN2P53010 1115 aaPredicted RBP3.65□□□□□ -1.83
PDP3YLR455W YLR407WQ06070 228 aa3.65□□□□□ -1.83
PDP3YLR455W FAP7Q12055 197 aaPredicted RBP3.65□□□□□ -1.83
PDP3YLR455W POM34Q12445 299 aa3.65□□□□□ -1.83
PDP3YLR455W NUP145P49687 1317 aa3.65□□□□□ -1.83
PDP3YLR455W GFA1P14742 717 aaKnown RBP3.64□□□□□ -1.83
PDP3YLR455W CDC43P18898 376 aa3.64□□□□□ -1.83
PDP3YLR455W MVD1P32377 396 aaKnown RBP3.64□□□□□ -1.83
PDP3YLR455W BCS1P32839 456 aa3.64□□□□□ -1.83
PDP3YLR455W TDP1P38319 544 aa3.64□□□□□ -1.83
PDP3YLR455W IES1P43579 692 aa3.64□□□□□ -1.83
PDP3YLR455W ATG4P53867 494 aa3.64□□□□□ -1.83
PDP3YLR455W YMR210WQ03649 449 aa3.64□□□□□ -1.83
PDP3YLR455W RGC1Q06108 1083 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms