RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W UBP5P39944 805 aa7.87□□□□□ -1.15
SNF7YLR025W GPD2P41911 440 aaKnown RBP7.87□□□□□ -1.15
SNF7YLR025W SKP1P52286 194 aa7.87□□□□□ -1.15
SNF7YLR025W SUT1P53032 299 aaKnown RBP7.87□□□□□ -1.15
SNF7YLR025W TAD1P53065 400 aa7.87□□□□□ -1.15
SNF7YLR025W CEF1Q03654 590 aaPredicted RBP7.87□□□□□ -1.15
SNF7YLR025W CUR1Q06469 252 aa7.87□□□□□ -1.15
SNF7YLR025W NOC3Q07896 663 aaPredicted RBP7.87□□□□□ -1.15
SNF7YLR025W SMC5Q08204 1093 aa7.87□□□□□ -1.15
SNF7YLR025W MSC6Q08818 692 aaKnown RBP7.87□□□□□ -1.15
SNF7YLR025W AIM41Q12032 185 aa7.87□□□□□ -1.15
SNF7YLR025W RMP1Q12530 201 aa7.87□□□□□ -1.15
SNF7YLR025W SAM1P10659 382 aaKnown RBP7.86□□□□□ -1.15
SNF7YLR025W RPB10P22139 70 aa7.86□□□□□ -1.15
SNF7YLR025W PER1P25625 357 aa7.86□□□□□ -1.15
SNF7YLR025W YSC83P32792 385 aa7.86□□□□□ -1.15
SNF7YLR025W MRPL16P38064 232 aa7.86□□□□□ -1.15
SNF7YLR025W YHR219WP38900 624 aa7.86□□□□□ -1.15
SNF7YLR025W VAB2P40003 282 aa7.86□□□□□ -1.15
SNF7YLR025W FIR1P40020 876 aa7.86□□□□□ -1.15
SNF7YLR025W FIS1P40515 155 aa7.86□□□□□ -1.15
SNF7YLR025W PXA1P41909 870 aa7.86□□□□□ -1.15
SNF7YLR025W VPS53P47061 822 aa7.86□□□□□ -1.15
SNF7YLR025W ESBP6P53918 673 aa7.86□□□□□ -1.15
SNF7YLR025W ALD6P54115 500 aaKnown RBP7.86□□□□□ -1.15
SNF7YLR025W EEB1Q02891 456 aa7.86□□□□□ -1.15
SNF7YLR025W SIL1Q08199 421 aa7.86□□□□□ -1.15
SNF7YLR025W TRP2P00899 507 aaKnown RBP7.85□□□□□ -1.15
SNF7YLR025W CDC33P07260 213 aaKnown RBP7.85□□□□□ -1.15
SNF7YLR025W ERG11P10614 530 aa7.85□□□□□ -1.15
SNF7YLR025W SEC21P32074 935 aaKnown RBP7.85□□□□□ -1.15
SNF7YLR025W CBF2P32504 956 aa7.85□□□□□ -1.15
SNF7YLR025W GCG1P32656 232 aaKnown RBP7.85□□□□□ -1.15
SNF7YLR025W PIN4P34217 668 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
SNF7YLR025W YEL1P34225 687 aa7.85□□□□□ -1.15
SNF7YLR025W OCT1P35999 772 aa7.85□□□□□ -1.15
SNF7YLR025W YIR007WP40566 764 aa7.85□□□□□ -1.15
SNF7YLR025W TRS85P46944 698 aa7.85□□□□□ -1.15
SNF7YLR025W YJR079WP47126 109 aa7.85□□□□□ -1.15
SNF7YLR025W YGR130CP53278 816 aa7.85□□□□□ -1.15
SNF7YLR025W CPR6P53691 371 aaKnown RBP7.85□□□□□ -1.15
SNF7YLR025W YAF9P53930 226 aa7.85□□□□□ -1.15
SNF7YLR025W SFH1Q06168 426 aa7.85□□□□□ -1.15
SNF7YLR025W OSW2Q12202 724 aa7.85□□□□□ -1.15
SNF7YLR025W SEY1Q99287 776 aa7.85□□□□□ -1.15
SNF7YLR025W YLR462WO13556 202 aa7.84□□□□□ -1.15
SNF7YLR025W SPO16P17122 198 aa7.84□□□□□ -1.15
SNF7YLR025W DIT1P21623 536 aa7.84□□□□□ -1.15
SNF7YLR025W VMA4P22203 233 aaKnown RBP7.84□□□□□ -1.15
SNF7YLR025W PRP22P24384 1145 aaKnown RBP7.84□□□□□ -1.15
SNF7YLR025W MUD1P32605 298 aaKnown RBP7.84□□□□□ -1.15
SNF7YLR025W SEC8P32855 1065 aa7.84□□□□□ -1.15
SNF7YLR025W UBP11P36026 717 aa7.84□□□□□ -1.15
SNF7YLR025W PGM2P37012 569 aaKnown RBP7.84□□□□□ -1.15
SNF7YLR025W GIP1P38229 639 aa7.84□□□□□ -1.15
SNF7YLR025W TIF5P38431 405 aaKnown RBP7.84□□□□□ -1.15
SNF7YLR025W RCK2P38623 610 aa7.84□□□□□ -1.15
SNF7YLR025W HIS2P38635 335 aa7.84□□□□□ -1.15
SNF7YLR025W YHL049CP38722 271 aa7.84□□□□□ -1.15
SNF7YLR025W CCT2P39076 527 aaKnown RBP7.84□□□□□ -1.15
SNF7YLR025W YEL075CP39972 122 aa7.84□□□□□ -1.15
SNF7YLR025W KAP123P40069 1113 aaKnown RBP7.84□□□□□ -1.15
SNF7YLR025W YER189WP40104 122 aa7.84□□□□□ -1.15
SNF7YLR025W YFL064CP43540 174 aa7.84□□□□□ -1.15
SNF7YLR025W CAF120P53836 1060 aa7.84□□□□□ -1.15
SNF7YLR025W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15 RIP-Chip
SNF7YLR025W UTP6Q02354 440 aaKnown RBP7.84□□□□□ -1.15
SNF7YLR025W CUS1Q02554 436 aaPredicted RBP7.84□□□□□ -1.15
SNF7YLR025W YMR265CQ03508 461 aaKnown RBP7.84□□□□□ -1.15
SNF7YLR025W DON1Q05610 365 aa7.84□□□□□ -1.15
SNF7YLR025W SPH1Q06160 661 aa7.84□□□□□ -1.15
SNF7YLR025W NUT2Q06213 157 aa7.84□□□□□ -1.15
SNF7YLR025W GUD1Q07729 489 aa7.84□□□□□ -1.15
SNF7YLR025W YOR223WQ12015 292 aa7.84□□□□□ -1.15
SNF7YLR025W SPO21Q12411 609 aa7.84□□□□□ -1.15
SNF7YLR025W STB3Q12427 513 aa7.84□□□□□ -1.15
SNF7YLR025W YBL111CQ3E7Y5 667 aa7.84□□□□□ -1.15
SNF7YLR025W FKS1P38631 1876 aaKnown RBP7.83□□□□□ -1.16
SNF7YLR025W PHR1P05066 565 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
SNF7YLR025W MSN1P22148 382 aa7.83□□□□□ -1.16
SNF7YLR025W KIP1P28742 1111 aa7.83□□□□□ -1.16
SNF7YLR025W DBF4P32325 704 aa7.83□□□□□ -1.16
SNF7YLR025W TFC4P33339 1025 aa7.83□□□□□ -1.16
SNF7YLR025W MCR1P36060 302 aaKnown RBP7.83□□□□□ -1.16
SNF7YLR025W TRZ1P36159 838 aaPredicted RBP7.83□□□□□ -1.16
SNF7YLR025W ECM2P38241 364 aaKnown RBP7.83□□□□□ -1.16
SNF7YLR025W EXO5P38289 585 aa7.83□□□□□ -1.16
SNF7YLR025W RRT2P38332 387 aa7.83□□□□□ -1.16
SNF7YLR025W HMF1P40037 129 aaKnown RBP7.83□□□□□ -1.16
SNF7YLR025W DSN1P40568 576 aa7.83□□□□□ -1.16
SNF7YLR025W INA22P40576 216 aa7.83□□□□□ -1.16
SNF7YLR025W LCB2P40970 561 aa7.83□□□□□ -1.16
SNF7YLR025W ATG36P46983 293 aa7.83□□□□□ -1.16
SNF7YLR025W CUZ1P53899 274 aa7.83□□□□□ -1.16
SNF7YLR025W DIG1Q03063 452 aaKnown RBP7.83□□□□□ -1.16
SNF7YLR025W TMA64Q04600 565 aaKnown RBP7.83□□□□□ -1.16
SNF7YLR025W WHI4Q07655 649 aaKnown RBP7.83□□□□□ -1.16
SNF7YLR025W CCP1P00431 361 aa7.82□□□□□ -1.16
SNF7YLR025W THS1P04801 734 aaKnown RBP7.82□□□□□ -1.16
SNF7YLR025W RPB2P08518 1224 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms