RNA–Protein interactions for RNA: YKR105C

VBA5, Transcript of Plasma membrane protein of the Major Facilitator Superfamily (MFS), yeastyeast

Gene VBA5, Length 1,749 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA5YKR105C ATG11Q12527 1178 aa7.27□□□□□ -1.25
VBA5YKR105C RTP1Q12751 981 aa7.27□□□□□ -1.25
VBA5YKR105C SNF1P06782 633 aaKnown RBP7.27□□□□□ -1.25
VBA5YKR105C YEL043WP32618 956 aa7.27□□□□□ -1.25
VBA5YKR105C YKL050CP35736 922 aa7.27□□□□□ -1.25
VBA5YKR105C MRX3P38172 270 aa7.27□□□□□ -1.25
VBA5YKR105C MMS4P38257 691 aa7.27□□□□□ -1.25
VBA5YKR105C YHR218WP38899 603 aa7.27□□□□□ -1.25
VBA5YKR105C RIO2P40160 425 aaKnown RBP7.27□□□□□ -1.25
VBA5YKR105C CLA4P48562 842 aa7.27□□□□□ -1.25
VBA5YKR105C DUS1P53759 423 aaKnown RBP7.27□□□□□ -1.25
VBA5YKR105C RPA49Q01080 415 aaPredicted RBP7.27□□□□□ -1.25
VBA5YKR105C CIR2Q08822 631 aa7.27□□□□□ -1.25
VBA5YKR105C ERP4Q12450 207 aa7.27□□□□□ -1.25
VBA5YKR105C TRP2P00899 507 aaKnown RBP7.26□□□□□ -1.25
VBA5YKR105C NAT1P12945 854 aaKnown RBP7.26□□□□□ -1.25
VBA5YKR105C DPB3P27344 201 aa7.26□□□□□ -1.25
VBA5YKR105C MSS51P32335 436 aa7.26□□□□□ -1.25
VBA5YKR105C ACP1P32463 125 aa7.26□□□□□ -1.25
VBA5YKR105C CCC2P38995 1004 aa7.26□□□□□ -1.25
VBA5YKR105C PSY2P40164 858 aa7.26□□□□□ -1.25
VBA5YKR105C SBE2P42223 864 aaKnown RBP7.26□□□□□ -1.25
VBA5YKR105C CPR7P47103 393 aa7.26□□□□□ -1.25
VBA5YKR105C PRP31P49704 494 aaPredicted RBP7.26□□□□□ -1.25
VBA5YKR105C NCS6P53088 359 aa7.26□□□□□ -1.25
VBA5YKR105C YGR021WP53212 290 aa7.26□□□□□ -1.25
VBA5YKR105C RSM28Q03430 361 aa7.26□□□□□ -1.25
VBA5YKR105C STE20Q03497 939 aaKnown RBP7.26□□□□□ -1.25
VBA5YKR105C YMR114CQ04471 368 aaKnown RBP7.26□□□□□ -1.25
VBA5YKR105C ECM7Q06200 448 aa7.26□□□□□ -1.25
VBA5YKR105C PMT7Q06644 662 aa7.26□□□□□ -1.25
VBA5YKR105C YDL121CQ07541 149 aa7.26□□□□□ -1.25
VBA5YKR105C MAM3Q12296 706 aa7.26□□□□□ -1.25
VBA5YKR105C SEC14P24280 304 aaKnown RBP7.25□□□□□ -1.25
VBA5YKR105C TMT1P32643 299 aa7.25□□□□□ -1.25
VBA5YKR105C SET5P38890 526 aaKnown RBP7.25□□□□□ -1.25
VBA5YKR105C SAP1P39955 897 aaKnown RBP7.25□□□□□ -1.25
VBA5YKR105C SLX8P40072 274 aa7.25□□□□□ -1.25
VBA5YKR105C MNP1P53163 194 aaPredicted RBP7.25□□□□□ -1.25
VBA5YKR105C YMR018WQ04364 514 aa7.25□□□□□ -1.25
VBA5YKR105C ARR2Q06597 130 aa7.25□□□□□ -1.25
VBA5YKR105C OSH2Q12451 1283 aa7.25□□□□□ -1.25
VBA5YKR105C ZPS1Q12512 249 aa7.25□□□□□ -1.25
VBA5YKR105C VMA4P22203 233 aaKnown RBP7.24□□□□□ -1.25
VBA5YKR105C DAL2P25335 343 aa7.24□□□□□ -1.25
VBA5YKR105C SEC21P32074 935 aaKnown RBP7.24□□□□□ -1.25
VBA5YKR105C HXT1P32465 570 aa7.24□□□□□ -1.25
VBA5YKR105C BCS1P32839 456 aa7.24□□□□□ -1.25
VBA5YKR105C TRM2P33753 639 aa7.24□□□□□ -1.25
VBA5YKR105C EXO5P38289 585 aa7.24□□□□□ -1.25
VBA5YKR105C GPI8P49018 411 aa7.24□□□□□ -1.25
VBA5YKR105C BOP3P53958 396 aa7.24□□□□□ -1.25
VBA5YKR105C YNL035CP53962 389 aaKnown RBP7.24□□□□□ -1.25
VBA5YKR105C ERB1Q04660 807 aaKnown RBP7.24□□□□□ -1.25
VBA5YKR105C SUT2Q12286 268 aa7.24□□□□□ -1.25
VBA5YKR105C GFA1P14742 717 aaKnown RBP7.24□□□□□ -1.25
VBA5YKR105C IME1P21190 360 aa7.24□□□□□ -1.25
VBA5YKR105C PHO84P25297 587 aaKnown RBP7.24□□□□□ -1.25
VBA5YKR105C TRZ1P36159 838 aaPredicted RBP7.24□□□□□ -1.25
VBA5YKR105C SPC72P39723 622 aa7.24□□□□□ -1.25
VBA5YKR105C BUD16P39988 312 aa7.24□□□□□ -1.25
VBA5YKR105C SAD1P43589 448 aa7.24□□□□□ -1.25
VBA5YKR105C KAP114P53067 1004 aa7.24□□□□□ -1.25
VBA5YKR105C DRN1P53255 507 aaKnown RBP7.24□□□□□ -1.25
VBA5YKR105C MAL13P53338 473 aa7.24□□□□□ -1.25
VBA5YKR105C YMR111CQ04461 462 aaPredicted RBP7.24□□□□□ -1.25
VBA5YKR105C SSQ1Q05931 657 aaPredicted RBP7.24□□□□□ -1.25
VBA5YKR105C YPR097WQ06839 1073 aa7.24□□□□□ -1.25
VBA5YKR105C ABP140Q08641 628 aaKnown RBP7.24□□□□□ -1.25
VBA5YKR105C PET494P07390 489 aaPredicted RBP7.23□□□□□ -1.25
VBA5YKR105C RPL4AP10664 362 aaKnown RBP7.23□□□□□ -1.25
VBA5YKR105C SEC15P22224 910 aa7.23□□□□□ -1.25
VBA5YKR105C PUF4P25339 888 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
VBA5YKR105C PAH1P32567 862 aa7.23□□□□□ -1.25
VBA5YKR105C RRN6P32786 894 aa7.23□□□□□ -1.25
VBA5YKR105C DUR3P33413 735 aa7.23□□□□□ -1.25
VBA5YKR105C RRP1P35178 278 aaPredicted RBP7.23□□□□□ -1.25
VBA5YKR105C SSZ1P38788 538 aaKnown RBP7.23□□□□□ -1.25
VBA5YKR105C SMF1P38925 575 aa7.23□□□□□ -1.25
VBA5YKR105C YTA12P40341 825 aa7.23□□□□□ -1.25
VBA5YKR105C LAM5P43560 674 aa7.23□□□□□ -1.25
VBA5YKR105C RAD17P48581 401 aa7.23□□□□□ -1.25
VBA5YKR105C RPL4BP49626 362 aaKnown RBP7.23□□□□□ -1.25
VBA5YKR105C PNG1Q02890 363 aa7.23□□□□□ -1.25
VBA5YKR105C NGL3Q03210 505 aa7.23□□□□□ -1.25
VBA5YKR105C YLR455WQ06188 304 aa7.23□□□□□ -1.25
VBA5YKR105C ATG23Q06671 453 aa7.23□□□□□ -1.25
VBA5YKR105C ZRT2Q12436 422 aa7.23□□□□□ -1.25
VBA5YKR105C ASP3-2P0CX77 362 aa7.22□□□□□ -1.25
VBA5YKR105C ASP3-3P0CX78 362 aa7.22□□□□□ -1.25
VBA5YKR105C ASP3-4P0CX79 362 aa7.22□□□□□ -1.25
VBA5YKR105C ASP3-1P0CZ17 362 aa7.22□□□□□ -1.25
VBA5YKR105C STE11P23561 717 aa7.22□□□□□ -1.25
VBA5YKR105C RRT12P25381 491 aa7.22□□□□□ -1.25
VBA5YKR105C CSG2P35206 410 aa7.22□□□□□ -1.25
VBA5YKR105C TBS1P38114 1094 aa7.22□□□□□ -1.25
VBA5YKR105C VPS41P38959 992 aa7.22□□□□□ -1.25
VBA5YKR105C ARB1P40024 610 aaKnown RBP7.22□□□□□ -1.25
VBA5YKR105C KAP123P40069 1113 aaKnown RBP7.22□□□□□ -1.25
VBA5YKR105C MAD1P40957 749 aa7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms