RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
SWD2YKL018W NOP14Q99207 810 aaKnown RBP4.54□□□□□ -1.68
SWD2YKL018W SFP1P32432 683 aa4.53□□□□□ -1.68
SWD2YKL018W GRX4P32642 244 aa4.53□□□□□ -1.68
SWD2YKL018W NDC80P40460 691 aa4.53□□□□□ -1.68
SWD2YKL018W CTR1P49573 406 aa4.53□□□□□ -1.68
SWD2YKL018W SMX3P54999 86 aaPredicted RBP4.53□□□□□ -1.68
SWD2YKL018W PEX2P32800 271 aa4.52□□□□□ -1.69
SWD2YKL018W YKR018CP36114 725 aa4.52□□□□□ -1.69
SWD2YKL018W GLG1P36143 616 aa4.52□□□□□ -1.69
SWD2YKL018W CRP1P38845 465 aaKnown RBP4.52□□□□□ -1.69
SWD2YKL018W ARG2P40360 574 aa4.52□□□□□ -1.69
SWD2YKL018W YIL166CP40445 542 aa4.52□□□□□ -1.69
SWD2YKL018W NTG2Q08214 380 aa4.52□□□□□ -1.69
SWD2YKL018W ADR1P07248 1323 aa4.51□□□□□ -1.69
SWD2YKL018W RNR1P21524 888 aaKnown RBP4.51□□□□□ -1.69
SWD2YKL018W SPO11P23179 398 aa4.51□□□□□ -1.69
SWD2YKL018W TAH11P47112 604 aa4.51□□□□□ -1.69
SWD2YKL018W COG8Q04632 607 aa4.51□□□□□ -1.69
SWD2YKL018W CLF1Q12309 687 aaPredicted RBP4.51□□□□□ -1.69
SWD2YKL018W ZRT2Q12436 422 aa4.51□□□□□ -1.69
SWD2YKL018W HRP1Q99383 534 aaKnown RBP4.51□□□□□ -1.69
SWD2YKL018W SIR3P06701 978 aa4.5□□□□□ -1.69
SWD2YKL018W CCR4P31384 837 aaKnown RBP4.5□□□□□ -1.69
SWD2YKL018W YEL1P34225 687 aa4.5□□□□□ -1.69
SWD2YKL018W PHO11P35842 467 aa4.5□□□□□ -1.69
SWD2YKL018W APN2P38207 520 aa4.5□□□□□ -1.69
SWD2YKL018W PHO12P38693 467 aa4.5□□□□□ -1.69
SWD2YKL018W LYS9P38999 446 aa4.5□□□□□ -1.69
SWD2YKL018W YEN1P40028 759 aa4.5□□□□□ -1.69
SWD2YKL018W AIM14P53109 570 aa4.5□□□□□ -1.69
SWD2YKL018W RTS3P53289 263 aa4.5□□□□□ -1.69
SWD2YKL018W DNM1P54861 757 aa4.5□□□□□ -1.69
SWD2YKL018W GPD1Q00055 391 aaKnown RBP4.5□□□□□ -1.69
SWD2YKL018W GIN4Q12263 1142 aa4.5□□□□□ -1.69
SWD2YKL018W ERG6P25087 383 aaKnown RBP4.49□□□□□ -1.69
SWD2YKL018W UBP12P39538 1254 aa4.49□□□□□ -1.69
SWD2YKL018W ATG33Q06485 197 aa4.49□□□□□ -1.69
SWD2YKL018W SFL1P20134 766 aa4.48□□□□□ -1.69
SWD2YKL018W SEC15P22224 910 aa4.48□□□□□ -1.69
SWD2YKL018W MIH1P23748 554 aa4.48□□□□□ -1.69
SWD2YKL018W PCL2P25693 308 aa4.48□□□□□ -1.69
SWD2YKL018W YKR075CP36155 307 aa4.48□□□□□ -1.69
SWD2YKL018W RIX1P38883 763 aaPredicted RBP4.48□□□□□ -1.69
SWD2YKL018W HRB1P38922 454 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
SWD2YKL018W SET2P46995 733 aaKnown RBP4.48□□□□□ -1.69
SWD2YKL018W BFA1P47113 574 aa4.48□□□□□ -1.69
SWD2YKL018W HLJ1P48353 224 aa4.48□□□□□ -1.69
SWD2YKL018W ATG4P53867 494 aa4.48□□□□□ -1.69
SWD2YKL018W APM1Q00776 475 aaPredicted RBP4.48□□□□□ -1.69
SWD2YKL018W TFB2Q02939 513 aa4.48□□□□□ -1.69
SWD2YKL018W USV1Q12132 391 aa4.48□□□□□ -1.69
SWD2YKL018W SUT2Q12286 268 aa4.48□□□□□ -1.69
SWD2YKL018W ECM3Q99252 613 aa4.48□□□□□ -1.69
SWD2YKL018W TUB1P09733 447 aaKnown RBP4.47□□□□□ -1.69
SWD2YKL018W HMG1P12683 1054 aa4.47□□□□□ -1.69
SWD2YKL018W ABF1P14164 731 aa4.47□□□□□ -1.69
SWD2YKL018W RPL8AP17076 256 aaKnown RBP4.47□□□□□ -1.69
SWD2YKL018W PEX1P24004 1043 aa4.47□□□□□ -1.69
SWD2YKL018W MNN4P36044 1178 aa4.47□□□□□ -1.69
SWD2YKL018W BDH2P39713 417 aa4.47□□□□□ -1.69
SWD2YKL018W GET2P40056 285 aa4.47□□□□□ -1.69
SWD2YKL018W PIG2P40187 538 aa4.47□□□□□ -1.69
SWD2YKL018W ISA1Q07821 250 aaPredicted RBP4.47□□□□□ -1.69
SWD2YKL018W NDJ1Q12366 352 aa4.47□□□□□ -1.69
SWD2YKL018W BNR1P40450 1375 aa4.46□□□□□ -1.7
SWD2YKL018W RPN13O13563 156 aa4.46□□□□□ -1.7
SWD2YKL018W ILV6P25605 309 aaKnown RBP4.46□□□□□ -1.7
SWD2YKL018W YNL195CP40168 261 aa4.46□□□□□ -1.7
SWD2YKL018W CCT7P42943 550 aaKnown RBP4.46□□□□□ -1.7
SWD2YKL018W NOP9P47077 666 aaKnown RBP4.46□□□□□ -1.7
SWD2YKL018W FHN1P53279 174 aa4.46□□□□□ -1.7
SWD2YKL018W YNR029CP53729 429 aaKnown RBP4.46□□□□□ -1.7
SWD2YKL018W ARP4P80428 489 aa4.46□□□□□ -1.7
SWD2YKL018W GUD1Q07729 489 aa4.46□□□□□ -1.7
SWD2YKL018W MLH3Q12083 715 aa4.46□□□□□ -1.7
SWD2YKL018W TAF3Q12297 353 aa4.46□□□□□ -1.7
SWD2YKL018W NUP145P49687 1317 aa4.46□□□□□ -1.7
SWD2YKL018W PCM1P38628 557 aaKnown RBP4.45□□□□□ -1.7
SWD2YKL018W RSC8P43609 557 aaKnown RBP4.45□□□□□ -1.7
SWD2YKL018W LEE1Q02799 301 aaKnown RBP4.45□□□□□ -1.7
SWD2YKL018W TOP1P04786 769 aa4.44□□□□□ -1.7
SWD2YKL018W ERG20P08524 352 aaKnown RBP4.44□□□□□ -1.7
SWD2YKL018W ADY2P25613 283 aa4.44□□□□□ -1.7
SWD2YKL018W YHR202WP38887 602 aa4.44□□□□□ -1.7
SWD2YKL018W GID8P40208 455 aa4.44□□□□□ -1.7
SWD2YKL018W ATG36P46983 293 aa4.44□□□□□ -1.7
SWD2YKL018W BRE5P53741 515 aaKnown RBP4.44□□□□□ -1.7
SWD2YKL018W HMO1Q03973 246 aaKnown RBP4.44□□□□□ -1.7
SWD2YKL018W THR1P17423 357 aaKnown RBP4.43□□□□□ -1.7
SWD2YKL018W KCC4P25389 1037 aa4.43□□□□□ -1.7
SWD2YKL018W GMH1P36125 273 aa4.43□□□□□ -1.7
SWD2YKL018W GRX7P38068 203 aa4.43□□□□□ -1.7
SWD2YKL018W MAL31P38156 614 aa4.43□□□□□ -1.7
SWD2YKL018W SSZ1P38788 538 aaKnown RBP4.43□□□□□ -1.7
SWD2YKL018W PMT3P47190 753 aa4.43□□□□□ -1.7
SWD2YKL018W YGR237CP50089 785 aa4.43□□□□□ -1.7
SWD2YKL018W SDA1P53313 767 aaKnown RBP4.43□□□□□ -1.7
SWD2YKL018W SPC98P53540 846 aa4.43□□□□□ -1.7
SWD2YKL018W YNL193WP53870 558 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms