RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W PGA2P53903 129 aa6.88□□□□□ -1.31
PRE3YJL001W YNL146WP53906 100 aa6.88□□□□□ -1.31
PRE3YJL001W YPL109CQ02981 657 aa6.88□□□□□ -1.31
PRE3YJL001W MSH6Q03834 1242 aa6.88□□□□□ -1.31
PRE3YJL001W FUS2Q05670 677 aa6.88□□□□□ -1.31
PRE3YJL001W ESC8Q08119 714 aa6.88□□□□□ -1.31
PRE3YJL001W PLP2Q12017 286 aa6.88□□□□□ -1.31
PRE3YJL001W ATP1P07251 545 aaKnown RBP6.87□□□□□ -1.31
PRE3YJL001W HMG2P12684 1045 aa6.87□□□□□ -1.31
PRE3YJL001W HCM1P25364 564 aa6.87□□□□□ -1.31
PRE3YJL001W ATG19P35193 415 aa6.87□□□□□ -1.31
PRE3YJL001W ERC1P38767 581 aa6.87□□□□□ -1.31
PRE3YJL001W RVS167P39743 482 aaKnown RBP6.87□□□□□ -1.31
PRE3YJL001W YER186CP40101 306 aa6.87□□□□□ -1.31
PRE3YJL001W YKE2P52553 114 aa6.87□□□□□ -1.31
PRE3YJL001W SCW11P53189 542 aa6.87□□□□□ -1.31
PRE3YJL001W NCS2P53923 493 aaPredicted RBP6.87□□□□□ -1.31
PRE3YJL001W RCR2Q03446 210 aaKnown RBP6.87□□□□□ -1.31
PRE3YJL001W DNL4Q08387 944 aaPredicted RBP6.87□□□□□ -1.31
PRE3YJL001W ZPS1Q12512 249 aa6.87□□□□□ -1.31
PRE3YJL001W TRP2P00899 507 aaKnown RBP6.86□□□□□ -1.31
PRE3YJL001W HAP2P06774 265 aa6.86□□□□□ -1.31
PRE3YJL001W HIS5P07172 385 aa6.86□□□□□ -1.31
PRE3YJL001W CIT2P08679 460 aa6.86□□□□□ -1.31
PRE3YJL001W CBP3P21560 335 aa6.86□□□□□ -1.31
PRE3YJL001W COT1P32798 439 aa6.86□□□□□ -1.31
PRE3YJL001W SEG2P34250 1132 aa6.86□□□□□ -1.31
PRE3YJL001W VID24P38263 362 aa6.86□□□□□ -1.31
PRE3YJL001W ROG3P43602 733 aa6.86□□□□□ -1.31
PRE3YJL001W PPT1P53043 513 aa6.86□□□□□ -1.31
PRE3YJL001W ENV11P53246 860 aa6.86□□□□□ -1.31
PRE3YJL001W YGR130CP53278 816 aa6.86□□□□□ -1.31
PRE3YJL001W CAF130P53280 1122 aaPredicted RBP6.86□□□□□ -1.31
PRE3YJL001W EEB1Q02891 456 aa6.86□□□□□ -1.31
PRE3YJL001W ADI1Q03677 179 aa6.86□□□□□ -1.31
PRE3YJL001W YLR407WQ06070 228 aa6.86□□□□□ -1.31
PRE3YJL001W ECM7Q06200 448 aa6.86□□□□□ -1.31
PRE3YJL001W RSC2Q06488 889 aa6.86□□□□□ -1.31
PRE3YJL001W YLH47Q06493 454 aa6.86□□□□□ -1.31
PRE3YJL001W LAA1P39526 2014 aa6.85□□□□□ -1.31
PRE3YJL001W PGS1P25578 521 aa6.85□□□□□ -1.31
PRE3YJL001W CYS3P31373 394 aaKnown RBP6.85□□□□□ -1.31
PRE3YJL001W SKG6P32900 734 aaPredicted RBP6.85□□□□□ -1.31
PRE3YJL001W PCM1P38628 557 aaKnown RBP6.85□□□□□ -1.31
PRE3YJL001W RPN3P40016 523 aaKnown RBP6.85□□□□□ -1.31
PRE3YJL001W LSB6P42951 607 aa6.85□□□□□ -1.31
PRE3YJL001W YGR153WP48238 217 aa6.85□□□□□ -1.31
PRE3YJL001W CUL3P53202 744 aa6.85□□□□□ -1.31
PRE3YJL001W ARP5P53946 755 aa6.85□□□□□ -1.31
PRE3YJL001W ARK1P53974 638 aa6.85□□□□□ -1.31
PRE3YJL001W LEE1Q02799 301 aaKnown RBP6.85□□□□□ -1.31
PRE3YJL001W MFB1Q04922 465 aa6.85□□□□□ -1.31
PRE3YJL001W PMT7Q06644 662 aa6.85□□□□□ -1.31
PRE3YJL001W TY1A-BLQ12266 440 aa6.85□□□□□ -1.31
PRE3YJL001W SMC6Q12749 1114 aa6.85□□□□□ -1.31
PRE3YJL001W ACC1Q00955 2233 aaKnown RBP6.85□□□□□ -1.31
PRE3YJL001W MAS1P10507 462 aa6.84□□□□□ -1.31
PRE3YJL001W VPH1P32563 840 aaKnown RBP6.84□□□□□ -1.31
PRE3YJL001W PGM2P37012 569 aaKnown RBP6.84□□□□□ -1.31
PRE3YJL001W KRI1P42846 591 aaKnown RBP6.84□□□□□ -1.31
PRE3YJL001W ALG11P53954 548 aaKnown RBP6.84□□□□□ -1.31
PRE3YJL001W OSW2Q12202 724 aa6.84□□□□□ -1.31
PRE3YJL001W YOL098CQ12496 1037 aa6.84□□□□□ -1.31
PRE3YJL001W DBP5P20449 482 aaKnown RBP6.83□□□□□ -1.32
PRE3YJL001W SGF29P25554 259 aa6.83□□□□□ -1.32
PRE3YJL001W KTR4P38131 464 aa6.83□□□□□ -1.32
PRE3YJL001W SIP3P38717 1229 aa6.83□□□□□ -1.32
PRE3YJL001W PIH1P38768 344 aa6.83□□□□□ -1.32
PRE3YJL001W PIC2P40035 300 aa6.83□□□□□ -1.32
PRE3YJL001W ZAP1P47043 880 aa6.83□□□□□ -1.32
PRE3YJL001W NAM8Q00539 523 aaKnown RBP6.83□□□□□ -1.32
PRE3YJL001W TRS130Q03660 1102 aa6.83□□□□□ -1.32
PRE3YJL001W NSE1Q07913 336 aa6.83□□□□□ -1.32
PRE3YJL001W SDH5Q08230 162 aa6.83□□□□□ -1.32
PRE3YJL001W GET3Q12154 354 aaKnown RBP6.83□□□□□ -1.32
PRE3YJL001W TIP41Q12199 356 aa6.83□□□□□ -1.32
PRE3YJL001W PUS1Q12211 544 aaKnown RBP6.83□□□□□ -1.32
PRE3YJL001W OSH2Q12451 1283 aa6.83□□□□□ -1.32
PRE3YJL001W RPS14AP06367 137 aaKnown RBP6.82□□□□□ -1.32
PRE3YJL001W YEL076C-AP0CX16 216 aa6.82□□□□□ -1.32
PRE3YJL001W YLR464WP0CX17 216 aa6.82□□□□□ -1.32
PRE3YJL001W SPO11P23179 398 aa6.82□□□□□ -1.32
PRE3YJL001W SQT1P35184 431 aa6.82□□□□□ -1.32
PRE3YJL001W YBR284WP38150 797 aa6.82□□□□□ -1.32
PRE3YJL001W RIM11P38615 370 aa6.82□□□□□ -1.32
PRE3YJL001W RPS14BP39516 138 aaKnown RBP6.82□□□□□ -1.32
PRE3YJL001W YEL076CP39971 216 aa6.82□□□□□ -1.32
PRE3YJL001W BFA1P47113 574 aa6.82□□□□□ -1.32
PRE3YJL001W RSM26P47141 266 aa6.82□□□□□ -1.32
PRE3YJL001W STB4P50104 949 aa6.82□□□□□ -1.32
PRE3YJL001W SPC98P53540 846 aa6.82□□□□□ -1.32
PRE3YJL001W CBK1P53894 756 aa6.82□□□□□ -1.32
PRE3YJL001W SLG1P54867 378 aa6.82□□□□□ -1.32
PRE3YJL001W ADA2Q02336 434 aa6.82□□□□□ -1.32
PRE3YJL001W YMR265CQ03508 461 aaKnown RBP6.82□□□□□ -1.32
PRE3YJL001W NSE5Q03718 556 aa6.82□□□□□ -1.32
PRE3YJL001W PEX19Q07418 342 aa6.82□□□□□ -1.32
PRE3YJL001W FMP25Q08023 583 aa6.82□□□□□ -1.32
PRE3YJL001W REC8Q12188 680 aa6.82□□□□□ -1.32
PRE3YJL001W APM4Q99186 491 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms