RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	NUF2	P33895	451 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	MSG5	P38590	489 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	KHA1	P40309	873 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	YJL070C	P40361	888 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	LAM5	P43560	674 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	LIF1	P53150	421 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	GPD1	Q00055	391 aa	Known RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	MMT1	Q03218	510 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	RRP17	Q04031	235 aa	Predicted RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	GSF2	Q04697	403 aa	Known RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	ACM1	Q08981	209 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	NCA2	Q12374	616 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	LAM4	P38800	1345 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	SSA1	P10591	642 aa	Known RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	SUP45	P12385	437 aa	Known RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	PMR1	P13586	950 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	TAL1	P15019	335 aa	Known RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	NPP1	P25353	742 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	MVD1	P32377	396 aa	Known RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	COG2	P53271	262 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	DIP5	P53388	608 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	TRS130	Q03660	1102 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	SFH1	Q06168	426 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	LHS1	P36016	881 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	YKR023W	P36119	530 aa	Known RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	TFA2	P36145	328 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	ULP2	P40537	1034 aa	Predicted RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	NUT1	P53114	1132 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	IST1	P53843	298 aa	Predicted RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	UBP2	Q01476	1272 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	NHP10	Q03435	203 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	WRS1	Q12109	432 aa	Known RBP	4.85	□□□□□ -1.63
PAN1	YIR006C	ENO2	P00925	437 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	VAC17	P25591	423 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	PFF1	P38244	976 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	SRP68	P38687	599 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	LCP5	P40079	357 aa	Predicted RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	FOX2	Q02207	900 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	INA17	Q02888	182 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	ERV41	Q04651	352 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	TRE2	Q08693	809 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	VIK1	Q12045	647 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	SPE3	Q12074	293 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	ADR1	P07248	1323 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	SUI3	P09064	285 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	INO1	P11986	533 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	SEC2	P17065	759 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	MCM3	P24279	971 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	PTC4	P38089	393 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	TDA3	P38758	523 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	ALD5	P40047	520 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	SCS2	P40075	244 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	FTR1	P40088	404 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	RSC8	P43609	557 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	TOM22	P49334	152 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	TFB3	Q03290	321 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	ORM2	Q06144	216 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	NOP12	Q08208	459 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	ABP140	Q08641	628 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	CFT2	Q12102	859 aa	Predicted RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	TCP1	P12612	559 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	MSB1	P21339	1137 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	DAL2	P25335	343 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	GCD11	P32481	527 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	SMF2	P38778	549 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	ACA1	P39970	489 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	RPT2	P40327	437 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
PAN1	YIR006C	STR2	P47164	639 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	YJR142W	P47173	342 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	PXR1	P53335	271 aa	Predicted RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	HST2	P53686	357 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	JIP4	Q03361	876 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	ADI1	Q03677	179 aa		4.84	□□□□□ -1.63
PAN1	YIR006C	NOB1	Q08444	459 aa	Known RBP	4.84	□□□□□ -1.63
PAN1	YIR006C	SIR1	P21691	654 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	CHS3	P29465	1165 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	PRO3	P32263	286 aa	Known RBP	4.83	□□□□□ -1.64
PAN1	YIR006C	DPH5	P32469	300 aa	Predicted RBP	4.83	□□□□□ -1.64
PAN1	YIR006C	YKL222C	P35995	705 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	STV1	P37296	890 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	GAA1	P39012	614 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	SAH1	P39954	449 aa	Known RBP	4.83	□□□□□ -1.64
PAN1	YIR006C	BIM1	P40013	344 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	HMF1	P40037	129 aa	Known RBP	4.83	□□□□□ -1.64
PAN1	YIR006C	THO1	P40040	218 aa	Known RBP	4.83	□□□□□ -1.64
PAN1	YIR006C	NBP1	P52919	319 aa	Predicted RBP	4.83	□□□□□ -1.64
PAN1	YIR006C	EFM6	P53970	246 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	YML119W	Q03208	357 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	CDC73	Q06697	393 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	FMP25	Q08023	583 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	THI21	Q08975	551 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	YAH1	Q12184	172 aa	Known RBP	4.83	□□□□□ -1.64
PAN1	YIR006C	EFG1	Q3E705	233 aa	Known RBP	4.83	□□□□□ -1.64
PAN1	YIR006C	YJU2	P28320	278 aa	Predicted RBP	4.83	□□□□□ -1.64
PAN1	YIR006C	ATP7	P30902	174 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	SCC4	P40090	624 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	TAF11	Q04226	346 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	UFO1	Q04511	668 aa		4.83	□□□□□ -1.64
PAN1	YIR006C	AAD4	Q07747	329 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms