RNA–Protein interactions for RNA: YHR019C

DED81, Transcript of Cytosolic asparaginyl-tRNA synthetase, yeast

Gene DED81, Length 1,665 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED81	YHR019C	APL5	Q08951	932 aa	Known RBP	5.71	□□□□□ -1.5
DED81	YHR019C	AIM41	Q12032	185 aa		5.71	□□□□□ -1.5
DED81	YHR019C	SGT2	Q12118	346 aa	Known RBP	5.71	□□□□□ -1.5
DED81	YHR019C	SUT2	Q12286	268 aa		5.71	□□□□□ -1.5
DED81	YHR019C	RTP1	Q12751	981 aa		5.71	□□□□□ -1.5
DED81	YHR019C	ADE4	P04046	510 aa	Known RBP	5.7	□□□□□ -1.5
DED81	YHR019C	GAL10	P04397	699 aa		5.7	□□□□□ -1.5
DED81	YHR019C	GLN3	P18494	730 aa		5.7	□□□□□ -1.5
DED81	YHR019C	NFU1	P32860	256 aa		5.7	□□□□□ -1.5
DED81	YHR019C	SAH1	P39954	449 aa	Known RBP	5.7	□□□□□ -1.5
DED81	YHR019C	ZAP1	P47043	880 aa		5.7	□□□□□ -1.5
DED81	YHR019C	CWC21	Q03375	135 aa	Known RBP	5.7	□□□□□ -1.5
DED81	YHR019C	VPS72	Q03388	795 aa		5.7	□□□□□ -1.5
DED81	YHR019C	PML39	Q03760	334 aa		5.7	□□□□□ -1.5
DED81	YHR019C	ATG16	Q03818	150 aa		5.7	□□□□□ -1.5
DED81	YHR019C	YPR109W	Q06104	294 aa		5.7	□□□□□ -1.5
DED81	YHR019C	YOR131C	Q12486	218 aa		5.7	□□□□□ -1.5
DED81	YHR019C	YER152C	P10356	443 aa		5.69	□□□□□ -1.5
DED81	YHR019C	ECM32	P32644	1121 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	OLA1	P38219	394 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	CBR1	P38626	284 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	AFG3	P39925	761 aa		5.69	□□□□□ -1.5
DED81	YHR019C	ASG1	P40467	964 aa		5.69	□□□□□ -1.5
DED81	YHR019C	YNL320W	P42840	284 aa		5.69	□□□□□ -1.5
DED81	YHR019C	NMD5	P46970	1048 aa		5.69	□□□□□ -1.5
DED81	YHR019C	PUS2	P53167	370 aa		5.69	□□□□□ -1.5
DED81	YHR019C	NIS1	P53939	407 aa		5.69	□□□□□ -1.5
DED81	YHR019C	EEB1	Q02891	456 aa		5.69	□□□□□ -1.5
DED81	YHR019C	YMR187C	Q03236	431 aa		5.69	□□□□□ -1.5
DED81	YHR019C	DOT1	Q04089	582 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	TDA9	Q04545	1251 aa		5.69	□□□□□ -1.5
DED81	YHR019C	SRF1	Q12516	437 aa		5.69	□□□□□ -1.5
DED81	YHR019C	BI2	P03873	423 aa		5.69	□□□□□ -1.5
DED81	YHR019C	BI4	P03879	638 aa		5.69	□□□□□ -1.5
DED81	YHR019C	RAD1	P06777	1100 aa		5.69	□□□□□ -1.5
DED81	YHR019C	PRP9	P19736	530 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	EFB1	P32471	206 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	GCD6	P32501	712 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	RPT1	P33299	467 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	DUR3	P33413	735 aa		5.69	□□□□□ -1.5
DED81	YHR019C	YBL055C	P34220	418 aa	Predicted RBP	5.69	□□□□□ -1.5
DED81	YHR019C	SEG2	P34250	1132 aa		5.69	□□□□□ -1.5
DED81	YHR019C	LAS1	P36146	502 aa	Predicted RBP	5.69	□□□□□ -1.5
DED81	YHR019C	END3	P39013	349 aa		5.69	□□□□□ -1.5
DED81	YHR019C	NOG2	P53742	486 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	DUS1	P53759	423 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	GPD1	Q00055	391 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	MUK1	Q02866	612 aa		5.69	□□□□□ -1.5
DED81	YHR019C	SNU56	Q03782	492 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	UFO1	Q04511	668 aa		5.69	□□□□□ -1.5
DED81	YHR019C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
DED81	YHR019C	YOR059C	Q08448	450 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	RIO1	Q12196	484 aa	Known RBP	5.69	□□□□□ -1.5
DED81	YHR019C	LDB19	Q12502	818 aa		5.69	□□□□□ -1.5
DED81	YHR019C	BI3	Q9ZZW7	517 aa		5.69	□□□□□ -1.5
DED81	YHR019C	KAR3	P17119	729 aa		5.68	□□□□□ -1.5
DED81	YHR019C	ADE2	P21264	571 aa	Known RBP	5.68	□□□□□ -1.5
DED81	YHR019C	CAP1	P28495	268 aa	Known RBP	5.68	□□□□□ -1.5
DED81	YHR019C	RTG1	P32607	177 aa		5.68	□□□□□ -1.5
DED81	YHR019C	UBC6	P33296	250 aa	Predicted RBP	5.68	□□□□□ -1.5
DED81	YHR019C	MUD2	P36084	527 aa	Known RBP	5.68	□□□□□ -1.5
DED81	YHR019C	SPP381	P38282	291 aa	Predicted RBP	5.68	□□□□□ -1.5
DED81	YHR019C	TIF5	P38431	405 aa	Known RBP	5.68	□□□□□ -1.5
DED81	YHR019C	YHR054C	P38780	354 aa		5.68	□□□□□ -1.5
DED81	YHR019C	SAK1	P38990	1142 aa		5.68	□□□□□ -1.5
DED81	YHR019C	TMN3	P40071	706 aa		5.68	□□□□□ -1.5
DED81	YHR019C	YER186C	P40101	306 aa		5.68	□□□□□ -1.5
DED81	YHR019C	INP51	P40559	946 aa	Known RBP	5.68	□□□□□ -1.5
DED81	YHR019C	LAM5	P43560	674 aa		5.68	□□□□□ -1.5
DED81	YHR019C	AZR1	P50080	613 aa		5.68	□□□□□ -1.5
DED81	YHR019C	ALT1	P52893	592 aa		5.68	□□□□□ -1.5
DED81	YHR019C	YGL036W	P53185	909 aa	Predicted RBP	5.68	□□□□□ -1.5
DED81	YHR019C	HOP2	P53187	214 aa		5.68	□□□□□ -1.5
DED81	YHR019C	ALG11	P53954	548 aa	Known RBP	5.68	□□□□□ -1.5
DED81	YHR019C	ERV41	Q04651	352 aa		5.68	□□□□□ -1.5
DED81	YHR019C	CDD1	Q06549	142 aa		5.68	□□□□□ -1.5
DED81	YHR019C	ADE3	P07245	946 aa	Known RBP	5.67	□□□□□ -1.5
DED81	YHR019C	MMS21	P38632	267 aa		5.67	□□□□□ -1.5
DED81	YHR019C	QNS1	P38795	714 aa	Known RBP	5.67	□□□□□ -1.5
DED81	YHR019C	PMC1	P38929	1173 aa	Predicted RBP	5.67	□□□□□ -1.5
DED81	YHR019C	AIM21	P40563	679 aa		5.67	□□□□□ -1.5
DED81	YHR019C	ATG36	P46983	293 aa		5.67	□□□□□ -1.5
DED81	YHR019C	ASG7	P46993	209 aa		5.67	□□□□□ -1.5
DED81	YHR019C	ISM1	P48526	1002 aa		5.67	□□□□□ -1.5
DED81	YHR019C	NCS6	P53088	359 aa		5.67	□□□□□ -1.5
DED81	YHR019C	YNL035C	P53962	389 aa	Known RBP	5.67	□□□□□ -1.5
DED81	YHR019C	MTG1	Q03151	367 aa	Predicted RBP	5.67	□□□□□ -1.5
DED81	YHR019C	IVY1	Q04934	453 aa		5.67	□□□□□ -1.5
DED81	YHR019C	UTP13	Q05946	817 aa	Known RBP	5.67	□□□□□ -1.5
DED81	YHR019C	MPC54	Q08550	464 aa		5.67	□□□□□ -1.5
DED81	YHR019C	YPR027C	Q12079	277 aa		5.67	□□□□□ -1.5
DED81	YHR019C	PUS1	Q12211	544 aa	Known RBP	5.67	□□□□□ -1.5
DED81	YHR019C	MDM20	Q12387	796 aa	Known RBP	5.67	□□□□□ -1.5
DED81	YHR019C	CTF3	Q12748	733 aa		5.67	□□□□□ -1.5
DED81	YHR019C	CHS1	P08004	1131 aa		5.66	□□□□□ -1.5
DED81	YHR019C	PMS1	P14242	873 aa		5.66	□□□□□ -1.5
DED81	YHR019C	EST1	P17214	699 aa	Predicted RBP	5.66	□□□□□ -1.5
DED81	YHR019C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	RIP-Chip
DED81	YHR019C	ABD1	P32783	436 aa	Predicted RBP	5.66	□□□□□ -1.5
DED81	YHR019C	DRE2	P36152	348 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms