RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W ERO1Q03103 563 aa3.88□□□□□ -1.79
CAF130YGR134W RSC2Q06488 889 aa3.88□□□□□ -1.79
CAF130YGR134W ESC8Q08119 714 aa3.88□□□□□ -1.79
CAF130YGR134W GPR1Q12361 961 aa3.88□□□□□ -1.79
CAF130YGR134W GSY1P23337 708 aa3.88□□□□□ -1.79
CAF130YGR134W ORC2P32833 620 aa3.88□□□□□ -1.79
CAF130YGR134W BCK2P33306 851 aa3.88□□□□□ -1.79
CAF130YGR134W DOM34P33309 386 aa3.88□□□□□ -1.79
CAF130YGR134W MIC60P36112 540 aa3.88□□□□□ -1.79
CAF130YGR134W UIP5P36137 443 aa3.88□□□□□ -1.79
CAF130YGR134W CCZ1P38273 704 aa3.88□□□□□ -1.79
CAF130YGR134W ARH1P48360 493 aa3.88□□□□□ -1.79
CAF130YGR134W CKA1P15790 372 aa3.87□□□□□ -1.79
CAF130YGR134W GLK1P17709 500 aaKnown RBP3.87□□□□□ -1.79
CAF130YGR134W SED4P25365 1065 aa3.87□□□□□ -1.79
CAF130YGR134W MLS1P30952 554 aa3.87□□□□□ -1.79
CAF130YGR134W YKU70P32807 602 aa3.87□□□□□ -1.79
CAF130YGR134W YPT7P32939 208 aa3.87□□□□□ -1.79
CAF130YGR134W CNS1P33313 385 aa3.87□□□□□ -1.79
CAF130YGR134W UBS1P38290 277 aa3.87□□□□□ -1.79
CAF130YGR134W STT3P39007 718 aaKnown RBP3.87□□□□□ -1.79
CAF130YGR134W MSN5P52918 1224 aa3.87□□□□□ -1.79
CAF130YGR134W BIO5P53744 561 aaKnown RBP3.87□□□□□ -1.79
CAF130YGR134W YNR065CP53751 1116 aa3.87□□□□□ -1.79
CAF130YGR134W SYF1Q04048 859 aaPredicted RBP3.87□□□□□ -1.79
CAF130YGR134W BLS1Q06071 122 aa3.87□□□□□ -1.79
CAF130YGR134W PDR15Q04182 1529 aaKnown RBP3.87□□□□□ -1.79
CAF130YGR134W RET1P22276 1149 aaKnown RBP3.87□□□□□ -1.79
CAF130YGR134W PUP2P32379 260 aa3.87□□□□□ -1.79
CAF130YGR134W PPQ1P32945 549 aa3.87□□□□□ -1.79
CAF130YGR134W RPT5P33297 434 aaKnown RBP3.87□□□□□ -1.79
CAF130YGR134W PGM2P37012 569 aaKnown RBP3.87□□□□□ -1.79
CAF130YGR134W PCH2P38126 564 aa3.87□□□□□ -1.79
CAF130YGR134W RFC1P38630 861 aaKnown RBP3.87□□□□□ -1.79
CAF130YGR134W FET5P43561 622 aa3.87□□□□□ -1.79
CAF130YGR134W ATP22P50273 684 aaPredicted RBP3.87□□□□□ -1.79
CAF130YGR134W YNR063WP53749 607 aa3.87□□□□□ -1.79
CAF130YGR134W BNI4P53858 892 aa3.87□□□□□ -1.79
CAF130YGR134W HAP5Q02516 242 aa3.87□□□□□ -1.79
CAF130YGR134W RKM2Q03942 479 aa3.87□□□□□ -1.79
CAF130YGR134W SMF3Q12078 473 aaPredicted RBP3.87□□□□□ -1.79
CAF130YGR134W RPL11AP0C0W9 174 aaKnown RBP3.86□□□□□ -1.79
CAF130YGR134W BIK1P11709 440 aa3.86□□□□□ -1.79
CAF130YGR134W CYS3P31373 394 aaKnown RBP3.86□□□□□ -1.79
CAF130YGR134W FIR1P40020 876 aa3.86□□□□□ -1.79
CAF130YGR134W RAD26P40352 1085 aa3.86□□□□□ -1.79
CAF130YGR134W YJL068CP40363 299 aa3.86□□□□□ -1.79
CAF130YGR134W CIR1P42940 261 aa3.86□□□□□ -1.79
CAF130YGR134W RSM26P47141 266 aa3.86□□□□□ -1.79
CAF130YGR134W GNT1Q12096 491 aa3.86□□□□□ -1.79
CAF130YGR134W RPL11BQ3E757 174 aaPredicted RBP3.86□□□□□ -1.79
CAF130YGR134W TY3B-GQ99315 1547 aa3.86□□□□□ -1.79
CAF130YGR134W GCN2P15442 1659 aa3.86□□□□□ -1.79
CAF130YGR134W KAR3P17119 729 aa3.86□□□□□ -1.79
CAF130YGR134W SLA2P33338 968 aa3.86□□□□□ -1.79
CAF130YGR134W BYE1P36106 594 aa3.86□□□□□ -1.79
CAF130YGR134W HSM3P38348 480 aa3.86□□□□□ -1.79
CAF130YGR134W SLS1P42900 643 aa3.86□□□□□ -1.79
CAF130YGR134W TGL5Q12043 749 aa3.86□□□□□ -1.79
CAF130YGR134W TAH18Q12181 623 aa3.86□□□□□ -1.79
CAF130YGR134W SNT2P53127 1403 aa3.86□□□□□ -1.79
CAF130YGR134W FUM1P08417 488 aaKnown RBP3.86□□□□□ -1.79
CAF130YGR134W SGF29P25554 259 aa3.86□□□□□ -1.79
CAF130YGR134W ADK2P26364 225 aa3.86□□□□□ -1.79
CAF130YGR134W ADD66P36040 267 aa3.86□□□□□ -1.79
CAF130YGR134W VRP1P37370 817 aa3.86□□□□□ -1.79
CAF130YGR134W UGA2P38067 497 aa3.86□□□□□ -1.79
CAF130YGR134W GND1P38720 489 aaKnown RBP3.86□□□□□ -1.79
CAF130YGR134W SWD1P39706 426 aa3.86□□□□□ -1.79
CAF130YGR134W ASK10P48361 1146 aa3.86□□□□□ -1.79
CAF130YGR134W YNR061CP53747 219 aa3.86□□□□□ -1.79
CAF130YGR134W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
CAF130YGR134W YMR155WQ03795 547 aa3.86□□□□□ -1.79
CAF130YGR134W RAD33Q04231 177 aa3.86□□□□□ -1.79
CAF130YGR134W GTB1Q04924 702 aa3.86□□□□□ -1.79
CAF130YGR134W TY1B-JR2P47100 1755 aaKnown RBP3.86□□□□□ -1.79
CAF130YGR134W TY1B-ER2Q03619 1755 aa3.86□□□□□ -1.79
CAF130YGR134W TY1B-MR1Q04214 1755 aa3.86□□□□□ -1.79
CAF130YGR134W TY1B-MR2Q04670 1755 aaKnown RBP3.86□□□□□ -1.79
CAF130YGR134W TY1B-LR1Q12088 1755 aaKnown RBP3.86□□□□□ -1.79
CAF130YGR134W TY1B-NL1Q12112 1755 aa3.86□□□□□ -1.79
CAF130YGR134W TY1B-GR1Q12141 1755 aa3.86□□□□□ -1.79
CAF130YGR134W TY1B-BLQ12490 1755 aa3.86□□□□□ -1.79
CAF130YGR134W MET17P06106 444 aa3.85□□□□□ -1.79
CAF130YGR134W FUS1P11710 512 aa3.85□□□□□ -1.79
CAF130YGR134W APN1P22936 367 aa3.85□□□□□ -1.79
CAF130YGR134W PDC6P26263 563 aaKnown RBP3.85□□□□□ -1.79
CAF130YGR134W VPS53P47061 822 aa3.85□□□□□ -1.79
CAF130YGR134W ZIP2P53061 704 aa3.85□□□□□ -1.79
CAF130YGR134W LEE1Q02799 301 aaKnown RBP3.85□□□□□ -1.79
CAF130YGR134W HOS3Q02959 697 aaKnown RBP3.85□□□□□ -1.79
CAF130YGR134W HRQ1Q05549 1077 aa3.85□□□□□ -1.79
CAF130YGR134W EST2Q06163 884 aa3.85□□□□□ -1.79
CAF130YGR134W SMD2Q06217 110 aaKnown RBP3.85□□□□□ -1.79
CAF130YGR134W MET7Q08645 548 aa3.85□□□□□ -1.79
CAF130YGR134W YIG1Q08956 461 aa3.85□□□□□ -1.79
CAF130YGR134W THR1P17423 357 aaKnown RBP3.85□□□□□ -1.79
CAF130YGR134W MCM3P24279 971 aaKnown RBP3.85□□□□□ -1.79
CAF130YGR134W SPO74P45819 413 aa3.85□□□□□ -1.79
CAF130YGR134W GUP1P53154 560 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms