RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W HMG1P12683 1054 aa3.27□□□□□ -1.89
NIC96YFR002W YPT53P36019 220 aa3.27□□□□□ -1.89
NIC96YFR002W TRZ1P36159 838 aaPredicted RBP3.27□□□□□ -1.89
NIC96YFR002W GET2P40056 285 aa3.27□□□□□ -1.89
NIC96YFR002W PAN2P53010 1115 aaPredicted RBP3.27□□□□□ -1.89
NIC96YFR002W AIM14P53109 570 aa3.27□□□□□ -1.89
NIC96YFR002W SMX3P54999 86 aaPredicted RBP3.27□□□□□ -1.89
NIC96YFR002W CTK1Q03957 528 aaKnown RBP3.27□□□□□ -1.89
NIC96YFR002W POB3Q04636 552 aaKnown RBP3.27□□□□□ -1.89
NIC96YFR002W YKL033W-AQ86ZR7 236 aa3.27□□□□□ -1.89
NIC96YFR002W MET6P05694 767 aaKnown RBP3.27□□□□□ -1.89
NIC96YFR002W PCM1P38628 557 aaKnown RBP3.27□□□□□ -1.89
NIC96YFR002W NUP60P39705 539 aa3.27□□□□□ -1.89
NIC96YFR002W SSL2Q00578 843 aa3.27□□□□□ -1.89
NIC96YFR002W MVD1P32377 396 aaKnown RBP3.26□□□□□ -1.89
NIC96YFR002W YEL1P34225 687 aa3.26□□□□□ -1.89
NIC96YFR002W SFB3P38810 929 aa3.26□□□□□ -1.89
NIC96YFR002W REV7P38927 245 aa3.26□□□□□ -1.89
NIC96YFR002W BRE5P53741 515 aaKnown RBP3.26□□□□□ -1.89
NIC96YFR002W COG8Q04632 607 aa3.26□□□□□ -1.89
NIC96YFR002W PYC1P11154 1178 aaKnown RBP3.26□□□□□ -1.89
NIC96YFR002W SFL1P20134 766 aa3.26□□□□□ -1.89
NIC96YFR002W RNR1P21524 888 aaKnown RBP3.26□□□□□ -1.89
NIC96YFR002W APT2P36973 181 aa3.26□□□□□ -1.89
NIC96YFR002W UBS1P38290 277 aa3.26□□□□□ -1.89
NIC96YFR002W CBR1P38626 284 aaKnown RBP3.26□□□□□ -1.89
NIC96YFR002W CCT7P42943 550 aaKnown RBP3.26□□□□□ -1.89
NIC96YFR002W FHN1P53279 174 aa3.26□□□□□ -1.89
NIC96YFR002W YAP1802P53309 568 aa3.26□□□□□ -1.89
NIC96YFR002W CCR4P31384 837 aaKnown RBP3.25□□□□□ -1.89
NIC96YFR002W MNN4P36044 1178 aa3.25□□□□□ -1.89
NIC96YFR002W VPS73P53142 486 aaKnown RBP3.25□□□□□ -1.89
NIC96YFR002W REC102Q02721 264 aa3.25□□□□□ -1.89
NIC96YFR002W SIN3P22579 1536 aa3.25□□□□□ -1.89
NIC96YFR002W TAF2P23255 1407 aa3.25□□□□□ -1.89
NIC96YFR002W RRP14P36080 434 aaKnown RBP3.25□□□□□ -1.89
NIC96YFR002W TDP1P38319 544 aa3.25□□□□□ -1.89
NIC96YFR002W TAH11P47112 604 aa3.25□□□□□ -1.89
NIC96YFR002W ALG12P53730 551 aa3.25□□□□□ -1.89
NIC96YFR002W PHO11P35842 467 aa3.24□□□□□ -1.89
NIC96YFR002W PHO12P38693 467 aa3.24□□□□□ -1.89
NIC96YFR002W SSZ1P38788 538 aaKnown RBP3.24□□□□□ -1.89
NIC96YFR002W DOT6P40059 670 aaKnown RBP3.24□□□□□ -1.89
NIC96YFR002W YNL195CP40168 261 aa3.24□□□□□ -1.89
NIC96YFR002W NOP9P47077 666 aaKnown RBP3.24□□□□□ -1.89
NIC96YFR002W RNH70P53331 553 aa3.24□□□□□ -1.89
NIC96YFR002W ORC1P54784 914 aaPredicted RBP3.24□□□□□ -1.89
NIC96YFR002W TFB2Q02939 513 aa3.24□□□□□ -1.89
NIC96YFR002W MLH3Q12083 715 aa3.24□□□□□ -1.89
NIC96YFR002W DCS2Q12123 353 aa3.24□□□□□ -1.89
NIC96YFR002W GIN4Q12263 1142 aa3.24□□□□□ -1.89
NIC96YFR002W TAF3Q12297 353 aa3.24□□□□□ -1.89
NIC96YFR002W ESP1Q03018 1630 aa3.24□□□□□ -1.89
NIC96YFR002W KIN3P22209 435 aa3.24□□□□□ -1.89
NIC96YFR002W NDC80P40460 691 aa3.24□□□□□ -1.89
NIC96YFR002W PEX1P24004 1043 aa3.23□□□□□ -1.89
NIC96YFR002W ATF1P40353 525 aa3.23□□□□□ -1.89
NIC96YFR002W SET2P46995 733 aaKnown RBP3.23□□□□□ -1.89
NIC96YFR002W MET13P53128 600 aa3.23□□□□□ -1.89
NIC96YFR002W ECM3Q99252 613 aa3.23□□□□□ -1.89
NIC96YFR002W DRS2P39524 1355 aa3.23□□□□□ -1.89
NIC96YFR002W GFA1P14742 717 aaKnown RBP3.23□□□□□ -1.89
NIC96YFR002W APN2P38207 520 aa3.23□□□□□ -1.89
NIC96YFR002W YJL206CP39529 758 aa3.23□□□□□ -1.89
NIC96YFR002W YJR039WP47107 1121 aa3.23□□□□□ -1.89
NIC96YFR002W YNL193WP53870 558 aa3.23□□□□□ -1.89
NIC96YFR002W THI22Q06490 572 aa3.23□□□□□ -1.89
NIC96YFR002W THR1P17423 357 aaKnown RBP3.22□□□□□ -1.89
NIC96YFR002W AKL1P38080 1108 aaKnown RBP3.22□□□□□ -1.89
NIC96YFR002W CRP1P38845 465 aaKnown RBP3.22□□□□□ -1.89
NIC96YFR002W YML122CQ03207 126 aa3.22□□□□□ -1.89
NIC96YFR002W BNR1P40450 1375 aa3.22□□□□□ -1.89
NIC96YFR002W CDC43P18898 376 aa3.22□□□□□ -1.89
NIC96YFR002W SEC6P32844 805 aa3.22□□□□□ -1.89
NIC96YFR002W RSC8P43609 557 aaKnown RBP3.22□□□□□ -1.89
NIC96YFR002W COX18P53239 316 aa3.22□□□□□ -1.89
NIC96YFR002W ZRT2Q12436 422 aa3.22□□□□□ -1.89
NIC96YFR002W NTE1Q04958 1679 aa3.21□□□□□ -1.9
NIC96YFR002W EMP70P32802 667 aa3.21□□□□□ -1.9
NIC96YFR002W PPG1P32838 368 aa3.21□□□□□ -1.9
NIC96YFR002W NUG1P40010 520 aaKnown RBP3.21□□□□□ -1.9
NIC96YFR002W MGS1P40151 587 aa3.21□□□□□ -1.9
NIC96YFR002W ARG2P40360 574 aa3.21□□□□□ -1.9
NIC96YFR002W RPL8AP17076 256 aaKnown RBP3.21□□□□□ -1.9
NIC96YFR002W SET3P36124 751 aa3.21□□□□□ -1.9
NIC96YFR002W BDH2P39713 417 aa3.21□□□□□ -1.9
NIC96YFR002W ATG4P53867 494 aa3.21□□□□□ -1.9
NIC96YFR002W NOP14Q99207 810 aaKnown RBP3.21□□□□□ -1.9
NIC96YFR002W HCA4P20448 770 aaKnown RBP3.2□□□□□ -1.9
NIC96YFR002W DMC1P25453 334 aa3.2□□□□□ -1.9
NIC96YFR002W BCS1P32839 456 aa3.2□□□□□ -1.9
NIC96YFR002W YPT7P32939 208 aa3.2□□□□□ -1.9
NIC96YFR002W CUE2P36075 443 aaKnown RBP3.2□□□□□ -1.9
NIC96YFR002W FLO10P36170 1169 aa3.2□□□□□ -1.9
NIC96YFR002W BIT2P38346 545 aa3.2□□□□□ -1.9
NIC96YFR002W YHR202WP38887 602 aa3.2□□□□□ -1.9
NIC96YFR002W GUD1Q07729 489 aa3.2□□□□□ -1.9
NIC96YFR002W USV1Q12132 391 aa3.2□□□□□ -1.9
NIC96YFR002W PPZ2P33329 710 aa3.2□□□□□ -1.9
NIC96YFR002W GLG1P36143 616 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms