RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	STE6	P12866	1290 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	SEC2	P17065	759 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	DPH1	P40487	425 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	DIM1	P41819	318 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	YJL055W	P47044	245 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	HAM1	P47119	197 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	UTP6	Q02354	440 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	SHR3	Q02774	210 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	GPI17	Q04080	534 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	TDA9	Q04545	1251 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	MCM21	Q06675	368 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	YML002W	P0CF17	737 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	PEP5	P12868	1029 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	MSS116	P15424	664 aa	Known RBP	5.67	□□□□□ -1.5
VTC2	YFL004W	ALG1	P16661	449 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	MRPL25	P23369	157 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	SLM4	P38247	162 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	YHR020W	P38708	688 aa	Known RBP	5.67	□□□□□ -1.5
VTC2	YFL004W	GGA2	P38817	585 aa	Known RBP	5.67	□□□□□ -1.5
VTC2	YFL004W	SNL1	P40548	159 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	MMM1	P41800	426 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	ZIP2	P53061	704 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	YNL193W	P53870	558 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	SLU7	Q02775	382 aa	Known RBP	5.67	□□□□□ -1.5
VTC2	YFL004W	TAH18	Q12181	623 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	PGK1	P00560	416 aa	Known RBP	5.67	□□□□□ -1.5
VTC2	YFL004W	SEC18	P18759	758 aa	Known RBP	5.67	□□□□□ -1.5
VTC2	YFL004W	XRS2	P33301	854 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	PGM2	P37012	569 aa	Known RBP	5.67	□□□□□ -1.5
VTC2	YFL004W	PFF1	P38244	976 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	DLD3	P39976	496 aa	Known RBP	5.67	□□□□□ -1.5
VTC2	YFL004W	AVT6	P40074	448 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	RNR4	P49723	345 aa	Known RBP	5.67	□□□□□ -1.5
VTC2	YFL004W	MIG2	P53035	382 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	RSM28	Q03430	361 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	FMN1	Q03778	218 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	ARP9	Q05123	467 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	RTT10	Q08924	1013 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	ACM1	Q08981	209 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	YPR204W	Q08995	1032 aa		5.67	□□□□□ -1.5
VTC2	YFL004W	ERG12	P07277	443 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	ATR1	P13090	542 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	OM45	P16547	393 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	BIO2	P32451	375 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	RTG2	P32608	588 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	RPT5	P33297	434 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	VPS21	P36017	210 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	YGL108C	P53139	140 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	YGR021W	P53212	290 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	FPK1	P53739	893 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	NIS1	P53939	407 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	UBX4	P54730	416 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	RPL34A	P87262	121 aa	Predicted RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	PRP42	Q03776	544 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	YDL114W	Q07530	308 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	ADY3	Q07732	790 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	SGO1	Q08490	590 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	YPL216W	Q08964	1102 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	MMP1	Q12372	583 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	PET494	P07390	489 aa	Predicted RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	SSB1	P11484	613 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	SEC15	P22224	910 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	PHO3	P24031	467 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	RPC53	P25441	422 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	RPS5	P26783	225 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	MRX3	P38172	270 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	RXT2	P38255	430 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	TIF5	P38431	405 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	SSB2	P40150	613 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	GCV2	P49095	1034 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	MON1	P53129	644 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	YNR029C	P53729	429 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	RTC4	P53850	401 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	GDE1	Q02979	1223 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	YDR239C	Q03780	787 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	UTP14	Q04500	899 aa	Known RBP	5.66	□□□□□ -1.5
VTC2	YFL004W	YOL036W	Q08206	761 aa		5.66	□□□□□ -1.5
VTC2	YFL004W	NMT1	P14743	455 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	GAP1	P19145	602 aa	Predicted RBP	5.65	□□□□□ -1.5
VTC2	YFL004W	PRP6	P19735	899 aa	Predicted RBP	5.65	□□□□□ -1.5
VTC2	YFL004W	KIP2	P28743	706 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	RPT3	P33298	428 aa	Known RBP	5.65	□□□□□ -1.5
VTC2	YFL004W	SPC42	P36094	363 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	DIA4	P38705	446 aa	Predicted RBP	5.65	□□□□□ -1.5
VTC2	YFL004W	YHL008C	P38750	627 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	HXT6	P39003	570 aa	Known RBP	5.65	□□□□□ -1.5
VTC2	YFL004W	HXT7	P39004	570 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	LCP5	P40079	357 aa	Predicted RBP	5.65	□□□□□ -1.5
VTC2	YFL004W	PCI8	P40512	444 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	SMP3	Q04174	516 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	YPR078C	Q06813	372 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	RAD59	Q12223	238 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	EMP46	Q12396	444 aa		5.65	□□□□□ -1.5
VTC2	YFL004W	PDE2	P06776	526 aa		5.65	□□□□□ -1.51
VTC2	YFL004W	RET1	P22276	1149 aa	Known RBP	5.65	□□□□□ -1.51
VTC2	YFL004W	URE2	P23202	354 aa	Known RBP	5.65	□□□□□ -1.51
VTC2	YFL004W	ACH1	P32316	526 aa		5.65	□□□□□ -1.51
VTC2	YFL004W	YKL050C	P35736	922 aa		5.65	□□□□□ -1.51
VTC2	YFL004W	MMS21	P38632	267 aa		5.65	□□□□□ -1.51
VTC2	YFL004W	YHR112C	P38716	378 aa		5.65	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms