RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C CDS1P38221 457 aa3.59□□□□□ -1.83
MSH4YFL003C GTF1P53260 183 aaPredicted RBP3.59□□□□□ -1.83
MSH4YFL003C MLC2Q06580 163 aa3.59□□□□□ -1.83
MSH4YFL003C NGL1Q08213 363 aaKnown RBP3.59□□□□□ -1.83
MSH4YFL003C DIN7Q12086 430 aa3.59□□□□□ -1.83
MSH4YFL003C YOL114CQ12322 202 aa3.59□□□□□ -1.83
MSH4YFL003C NSI1Q12457 570 aa3.59□□□□□ -1.83
MSH4YFL003C POA1P38218 177 aa3.59□□□□□ -1.83
MSH4YFL003C YHR112CP38716 378 aa3.59□□□□□ -1.83
MSH4YFL003C MEF2P39677 819 aa3.59□□□□□ -1.83
MSH4YFL003C YNL195CP40168 261 aa3.59□□□□□ -1.83
MSH4YFL003C SLD3P53135 668 aa3.59□□□□□ -1.83
MSH4YFL003C BPT1P14772 1559 aa3.59□□□□□ -1.84
MSH4YFL003C MYO2P19524 1574 aaKnown RBP3.59□□□□□ -1.84
MSH4YFL003C SCT1P32784 759 aa3.58□□□□□ -1.84
MSH4YFL003C LAM1P38851 1228 aa3.58□□□□□ -1.84
MSH4YFL003C INP52P50942 1183 aa3.58□□□□□ -1.84
MSH4YFL003C ARG5,6Q01217 863 aa3.58□□□□□ -1.84
MSH4YFL003C CWC2Q12046 339 aaPredicted RBP3.58□□□□□ -1.84
MSH4YFL003C HIS5P07172 385 aa3.58□□□□□ -1.84
MSH4YFL003C EMC1P25574 760 aa3.58□□□□□ -1.84
MSH4YFL003C COQ2P32378 372 aa3.58□□□□□ -1.84
MSH4YFL003C BUD8P41698 603 aa3.58□□□□□ -1.84
MSH4YFL003C SET2P46995 733 aaKnown RBP3.58□□□□□ -1.84
MSH4YFL003C BNA1P47096 177 aa3.58□□□□□ -1.84
MSH4YFL003C TMA64Q04600 565 aaKnown RBP3.58□□□□□ -1.84
MSH4YFL003C TFC6Q06339 672 aa3.58□□□□□ -1.84
MSH4YFL003C KCS1Q12494 1050 aa3.58□□□□□ -1.84
MSH4YFL003C BUL1P48524 976 aa3.57□□□□□ -1.84
MSH4YFL003C YDL183CP48569 320 aa3.57□□□□□ -1.84
MSH4YFL003C VMS1Q04311 632 aaKnown RBP3.57□□□□□ -1.84
MSH4YFL003C VPS36Q06696 566 aa3.57□□□□□ -1.84
MSH4YFL003C ADH4P10127 382 aa3.57□□□□□ -1.84
MSH4YFL003C ATG19P35193 415 aa3.57□□□□□ -1.84
MSH4YFL003C ACA1P39970 489 aa3.57□□□□□ -1.84
MSH4YFL003C PTA1Q01329 785 aaPredicted RBP3.57□□□□□ -1.84
MSH4YFL003C YAP6Q03935 383 aa3.57□□□□□ -1.84
MSH4YFL003C SGD1Q06132 899 aa3.57□□□□□ -1.84
MSH4YFL003C BRE4Q07660 1125 aa3.57□□□□□ -1.84
MSH4YFL003C NKP1Q12493 238 aa3.57□□□□□ -1.84
MSH4YFL003C HRP1Q99383 534 aaKnown RBP3.57□□□□□ -1.84
MSH4YFL003C ACO1P19414 778 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
MSH4YFL003C DPB3P27344 201 aa3.57□□□□□ -1.84
MSH4YFL003C PUB1P32588 453 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
MSH4YFL003C SPC72P39723 622 aa3.57□□□□□ -1.84
MSH4YFL003C IMA5P40884 581 aa3.57□□□□□ -1.84
MSH4YFL003C PUS2P53167 370 aa3.57□□□□□ -1.84
MSH4YFL003C HLR1Q04429 423 aa3.57□□□□□ -1.84
MSH4YFL003C RPS17AP02407 136 aaKnown RBP3.56□□□□□ -1.84
MSH4YFL003C RPS17BP14127 136 aaKnown RBP3.56□□□□□ -1.84
MSH4YFL003C CDC20P26309 610 aa3.56□□□□□ -1.84
MSH4YFL003C SHM2P37291 469 aaKnown RBP3.56□□□□□ -1.84
MSH4YFL003C LYS9P38999 446 aa3.56□□□□□ -1.84
MSH4YFL003C GET2P40056 285 aa3.56□□□□□ -1.84
MSH4YFL003C VID27P40157 782 aa3.56□□□□□ -1.84
MSH4YFL003C MTD1Q02046 320 aaKnown RBP3.56□□□□□ -1.84
MSH4YFL003C LST4P34239 828 aa3.56□□□□□ -1.84
MSH4YFL003C SIC1P38634 284 aa3.56□□□□□ -1.84
MSH4YFL003C SRP68P38687 599 aaKnown RBP3.56□□□□□ -1.84
MSH4YFL003C EMP65P40085 556 aa3.56□□□□□ -1.84
MSH4YFL003C YIL092WP40497 633 aa3.56□□□□□ -1.84
MSH4YFL003C MED7Q08278 222 aa3.56□□□□□ -1.84
MSH4YFL003C PFK1P16861 987 aaKnown RBP3.55□□□□□ -1.84
MSH4YFL003C SEC18P18759 758 aaKnown RBP3.55□□□□□ -1.84
MSH4YFL003C RPA135P22138 1203 aaKnown RBP3.55□□□□□ -1.84
MSH4YFL003C CTF13P35203 478 aa3.55□□□□□ -1.84
MSH4YFL003C MNT2P53059 558 aa3.55□□□□□ -1.84
MSH4YFL003C MRPL22P53881 309 aa3.55□□□□□ -1.84
MSH4YFL003C TRS130Q03660 1102 aa3.55□□□□□ -1.84
MSH4YFL003C EIS1Q05050 843 aaKnown RBP3.55□□□□□ -1.84
MSH4YFL003C NPC2Q12408 173 aa3.55□□□□□ -1.84
MSH4YFL003C YLR415CO13578 112 aa3.55□□□□□ -1.84
MSH4YFL003C YEL076C-AP0CX16 216 aa3.55□□□□□ -1.84
MSH4YFL003C YLR464WP0CX17 216 aa3.55□□□□□ -1.84
MSH4YFL003C KAR4P25583 335 aa3.55□□□□□ -1.84
MSH4YFL003C PRE4P30657 266 aa3.55□□□□□ -1.84
MSH4YFL003C RMA1P36001 430 aaKnown RBP3.55□□□□□ -1.84
MSH4YFL003C YKL133CP36066 463 aa3.55□□□□□ -1.84
MSH4YFL003C YEL076CP39971 216 aa3.55□□□□□ -1.84
MSH4YFL003C YNR071CP53757 342 aa3.55□□□□□ -1.84
MSH4YFL003C TEX1P53851 422 aaKnown RBP3.55□□□□□ -1.84
MSH4YFL003C GCN5Q03330 439 aa3.55□□□□□ -1.84
MSH4YFL003C ISA1Q07821 250 aaPredicted RBP3.55□□□□□ -1.84
MSH4YFL003C TGL5Q12043 749 aa3.55□□□□□ -1.84
MSH4YFL003C TRM13Q12383 476 aa3.55□□□□□ -1.84
MSH4YFL003C SSK2P53599 1579 aa3.54□□□□□ -1.84
MSH4YFL003C HCA4P20448 770 aaKnown RBP3.54□□□□□ -1.84
MSH4YFL003C SED4P25365 1065 aa3.54□□□□□ -1.84
MSH4YFL003C PET309P32522 965 aaPredicted RBP3.54□□□□□ -1.84
MSH4YFL003C MAD3P47074 515 aa3.54□□□□□ -1.84
MSH4YFL003C NOP9P47077 666 aaKnown RBP3.54□□□□□ -1.84
MSH4YFL003C MTR3P48240 250 aaPredicted RBP3.54□□□□□ -1.84
MSH4YFL003C PRP31P49704 494 aaPredicted RBP3.54□□□□□ -1.84
MSH4YFL003C ARC35P53731 342 aaKnown RBP3.54□□□□□ -1.84
MSH4YFL003C GPB1Q08886 897 aa3.54□□□□□ -1.84
MSH4YFL003C NUR1Q12066 484 aa3.54□□□□□ -1.84
MSH4YFL003C GFA1P14742 717 aaKnown RBP3.54□□□□□ -1.84
MSH4YFL003C FRS1P15624 595 aaKnown RBP3.54□□□□□ -1.84
MSH4YFL003C NCP1P16603 691 aaKnown RBP3.54□□□□□ -1.84
MSH4YFL003C RNR1P21524 888 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms