RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W AIM26P32858 118 aa5.79□□□□□ -1.48
UBC6YER100W YHR202WP38887 602 aa5.79□□□□□ -1.48
UBC6YER100W EAF5P39995 279 aa5.79□□□□□ -1.48
UBC6YER100W SDP1P40479 209 aa5.79□□□□□ -1.48
UBC6YER100W SSY5P47002 699 aa5.79□□□□□ -1.48
UBC6YER100W MEP3P53390 489 aa5.79□□□□□ -1.48
UBC6YER100W YNR014WP53719 212 aa5.79□□□□□ -1.48
UBC6YER100W MOT3P54785 490 aaKnown RBP5.79□□□□□ -1.48
UBC6YER100W YMR210WQ03649 449 aa5.79□□□□□ -1.48
UBC6YER100W YMR018WQ04364 514 aa5.79□□□□□ -1.48
UBC6YER100W GPR1Q12361 961 aa5.79□□□□□ -1.48
UBC6YER100W INH1P01097 85 aa5.78□□□□□ -1.48
UBC6YER100W YCL049CP25577 312 aa5.78□□□□□ -1.48
UBC6YER100W DGR2P32330 852 aa5.78□□□□□ -1.48
UBC6YER100W APM3P38153 483 aa5.78□□□□□ -1.48
UBC6YER100W APN2P38207 520 aa5.78□□□□□ -1.48
UBC6YER100W YLF2P38746 405 aa5.78□□□□□ -1.48
UBC6YER100W YHR078WP38799 552 aa5.78□□□□□ -1.48
UBC6YER100W SPC72P39723 622 aa5.78□□□□□ -1.48
UBC6YER100W ZRG8P40021 1076 aa5.78□□□□□ -1.48
UBC6YER100W CPR6P53691 371 aaKnown RBP5.78□□□□□ -1.48
UBC6YER100W ORC4P54791 529 aa5.78□□□□□ -1.48
UBC6YER100W PHM7Q12252 991 aa5.78□□□□□ -1.48
UBC6YER100W ERP4Q12450 207 aa5.78□□□□□ -1.48
UBC6YER100W RPP2AP05319 106 aaKnown RBP5.77□□□□□ -1.49
UBC6YER100W YEL076C-AP0CX16 216 aa5.77□□□□□ -1.49
UBC6YER100W YLR464WP0CX17 216 aa5.77□□□□□ -1.49
UBC6YER100W MSB1P21339 1137 aaKnown RBP5.77□□□□□ -1.49
UBC6YER100W IMG2P25642 146 aaPredicted RBP5.77□□□□□ -1.49
UBC6YER100W PPE1P38796 400 aa5.77□□□□□ -1.49
UBC6YER100W SWD1P39706 426 aa5.77□□□□□ -1.49
UBC6YER100W YEL076CP39971 216 aa5.77□□□□□ -1.49
UBC6YER100W KAP123P40069 1113 aaKnown RBP5.77□□□□□ -1.49
UBC6YER100W SCS2P40075 244 aaKnown RBP5.77□□□□□ -1.49
UBC6YER100W MAD3P47074 515 aa5.77□□□□□ -1.49
UBC6YER100W ARC35P53731 342 aaKnown RBP5.77□□□□□ -1.49
UBC6YER100W LEE1Q02799 301 aaKnown RBP5.77□□□□□ -1.49
UBC6YER100W NSE5Q03718 556 aa5.77□□□□□ -1.49
UBC6YER100W TRI1Q05024 226 aa5.77□□□□□ -1.49
UBC6YER100W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
UBC6YER100W VHS3Q08438 674 aa5.77□□□□□ -1.49
UBC6YER100W VPS5Q92331 675 aa5.77□□□□□ -1.49
UBC6YER100W VAS1P07806 1104 aaKnown RBP5.76□□□□□ -1.49
UBC6YER100W SPE1P08432 466 aa5.76□□□□□ -1.49
UBC6YER100W ADH4P10127 382 aa5.76□□□□□ -1.49
UBC6YER100W SAF1P38352 637 aa5.76□□□□□ -1.49
UBC6YER100W PTC7P38797 343 aa5.76□□□□□ -1.49
UBC6YER100W AKR1P39010 764 aa5.76□□□□□ -1.49
UBC6YER100W ESL1P40456 1118 aa5.76□□□□□ -1.49
UBC6YER100W URM1P40554 99 aaPredicted RBP5.76□□□□□ -1.49
UBC6YER100W MND2P40577 368 aa5.76□□□□□ -1.49
UBC6YER100W SMK1P41808 388 aa5.76□□□□□ -1.49
UBC6YER100W MTR3P48240 250 aaPredicted RBP5.76□□□□□ -1.49
UBC6YER100W EXG2P52911 562 aa5.76□□□□□ -1.49
UBC6YER100W MRPL13Q02204 264 aa5.76□□□□□ -1.49
UBC6YER100W IMH1Q06704 911 aaKnown RBP5.76□□□□□ -1.49
UBC6YER100W PET127P32606 800 aa5.75□□□□□ -1.49
UBC6YER100W SEG2P34250 1132 aa5.75□□□□□ -1.49
UBC6YER100W LAM1P38851 1228 aa5.75□□□□□ -1.49
UBC6YER100W DUN1P39009 513 aa5.75□□□□□ -1.49
UBC6YER100W NDE1P40215 560 aa5.75□□□□□ -1.49
UBC6YER100W GTS1P40956 396 aa5.75□□□□□ -1.49
UBC6YER100W MAD2P40958 196 aa5.75□□□□□ -1.49
UBC6YER100W YGR035CP53222 116 aa5.75□□□□□ -1.49
UBC6YER100W SGD1Q06132 899 aa5.75□□□□□ -1.49
UBC6YER100W TFC6Q06339 672 aa5.75□□□□□ -1.49
UBC6YER100W STP4Q07351 490 aa5.75□□□□□ -1.49
UBC6YER100W SDH5Q08230 162 aa5.75□□□□□ -1.49
UBC6YER100W CMP2P14747 604 aa5.74□□□□□ -1.49
UBC6YER100W IME1P21190 360 aa5.74□□□□□ -1.49
UBC6YER100W MCM3P24279 971 aaKnown RBP5.74□□□□□ -1.49
UBC6YER100W PGM1P33401 570 aaKnown RBP5.74□□□□□ -1.49
UBC6YER100W APL2P36000 726 aaPredicted RBP5.74□□□□□ -1.49
UBC6YER100W ECM1P39715 212 aa5.74□□□□□ -1.49
UBC6YER100W PZF1P39933 429 aa5.74□□□□□ -1.49
UBC6YER100W IMA5P40884 581 aa5.74□□□□□ -1.49
UBC6YER100W ASI2P53895 289 aa5.74□□□□□ -1.49
UBC6YER100W SPC19Q03954 165 aa5.74□□□□□ -1.49
UBC6YER100W YPS7Q06325 596 aa5.74□□□□□ -1.49
UBC6YER100W RTK1Q12100 620 aaPredicted RBP5.74□□□□□ -1.49
UBC6YER100W FOB1O13329 566 aa5.73□□□□□ -1.49
UBC6YER100W SIR1P21691 654 aa5.73□□□□□ -1.49
UBC6YER100W UBC1P21734 215 aaKnown RBP5.73□□□□□ -1.49
UBC6YER100W YPT7P32939 208 aa5.73□□□□□ -1.49
UBC6YER100W RPT3P33298 428 aaKnown RBP5.73□□□□□ -1.49
UBC6YER100W LRG1P35688 1017 aa5.73□□□□□ -1.49
UBC6YER100W NPR3P38742 1146 aa5.73□□□□□ -1.49
UBC6YER100W STT3P39007 718 aaKnown RBP5.73□□□□□ -1.49
UBC6YER100W VPS8P39702 1274 aa5.73□□□□□ -1.49
UBC6YER100W NOP16P40007 231 aaKnown RBP5.73□□□□□ -1.49
UBC6YER100W BNA1P47096 177 aa5.73□□□□□ -1.49
UBC6YER100W MNT2P53059 558 aa5.73□□□□□ -1.49
UBC6YER100W PEF1P53238 335 aa5.73□□□□□ -1.49
UBC6YER100W ORC3P54790 616 aa5.73□□□□□ -1.49
UBC6YER100W MUS81Q04149 632 aaPredicted RBP5.73□□□□□ -1.49
UBC6YER100W ADY3Q07732 790 aa5.73□□□□□ -1.49
UBC6YER100W DIN7Q12086 430 aa5.73□□□□□ -1.49
UBC6YER100W PHO5P00635 467 aa5.72□□□□□ -1.49
UBC6YER100W PYC1P11154 1178 aaKnown RBP5.72□□□□□ -1.49
UBC6YER100W NCP1P16603 691 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms