RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	YLR407W	Q06070	228 aa		6.12	□□□□□ -1.43
LSM6	YDR378C	URN1	Q06525	465 aa	Known RBP	6.12	□□□□□ -1.43
LSM6	YDR378C	VHS3	Q08438	674 aa		6.12	□□□□□ -1.43
LSM6	YDR378C	SGO1	Q08490	590 aa		6.12	□□□□□ -1.43
LSM6	YDR378C	APM4	Q99186	491 aa		6.12	□□□□□ -1.43
LSM6	YDR378C	SWI6	P09959	803 aa		6.11	□□□□□ -1.43
LSM6	YDR378C	EFT1	P32324	842 aa	Known RBP	6.11	□□□□□ -1.43
LSM6	YDR378C	KTR4	P38131	464 aa		6.11	□□□□□ -1.43
LSM6	YDR378C	ELO3	P40319	345 aa		6.11	□□□□□ -1.43
LSM6	YDR378C	SPC105	P53148	917 aa		6.11	□□□□□ -1.43
LSM6	YDR378C	YPR027C	Q12079	277 aa		6.11	□□□□□ -1.43
LSM6	YDR378C	NTO1	Q12311	748 aa		6.11	□□□□□ -1.43
LSM6	YDR378C	LAT1	P12695	482 aa	Known RBP	6.1	□□□□□ -1.43
LSM6	YDR378C	ERG4	P25340	473 aa		6.1	□□□□□ -1.43
LSM6	YDR378C	HRR25	P29295	494 aa	Known RBP	6.1	□□□□□ -1.43
LSM6	YDR378C	RNR4	P49723	345 aa	Known RBP	6.1	□□□□□ -1.43
LSM6	YDR378C	SLD3	P53135	668 aa		6.1	□□□□□ -1.43
LSM6	YDR378C	NOP15	P53927	220 aa	Predicted RBP	6.1	□□□□□ -1.43
LSM6	YDR378C	DIA2	Q08496	732 aa	Predicted RBP	6.1	□□□□□ -1.43
LSM6	YDR378C	RNR1	P21524	888 aa	Known RBP	6.09	□□□□□ -1.43
LSM6	YDR378C	IMG2	P25642	146 aa	Predicted RBP	6.09	□□□□□ -1.43
LSM6	YDR378C	YKU70	P32807	602 aa		6.09	□□□□□ -1.43
LSM6	YDR378C	TFC4	P33339	1025 aa		6.09	□□□□□ -1.43
LSM6	YDR378C	DEF1	P35732	738 aa	Known RBP	6.09	□□□□□ -1.43
LSM6	YDR378C	BIT2	P38346	545 aa		6.09	□□□□□ -1.43
LSM6	YDR378C	DUN1	P39009	513 aa		6.09	□□□□□ -1.43
LSM6	YDR378C	EMP65	P40085	556 aa		6.09	□□□□□ -1.43
LSM6	YDR378C	TMA7	Q3E764	64 aa	Known RBP	6.09	□□□□□ -1.43
LSM6	YDR378C	KAR1	P11927	433 aa		6.08	□□□□□ -1.44
LSM6	YDR378C	PLC1	P32383	869 aa		6.08	□□□□□ -1.44
LSM6	YDR378C	PET127	P32606	800 aa		6.08	□□□□□ -1.44
LSM6	YDR378C	FAT1	P38225	669 aa		6.08	□□□□□ -1.44
LSM6	YDR378C	RPS17A	P02407	136 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	ERG20	P08524	352 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	GLN4	P13188	809 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	RPS17B	P14127	136 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	FRS1	P15624	595 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	HCA4	P20448	770 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	PMI40	P29952	429 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	TRM2	P33753	639 aa		6.07	□□□□□ -1.44
LSM6	YDR378C	ENP1	P38333	483 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	GIP4	P39732	760 aa		6.07	□□□□□ -1.44
LSM6	YDR378C	YNL195C	P40168	261 aa		6.07	□□□□□ -1.44
LSM6	YDR378C	TAF1	P46677	1066 aa		6.07	□□□□□ -1.44
LSM6	YDR378C	BUL1	P48524	976 aa		6.07	□□□□□ -1.44
LSM6	YDR378C	PEX8	P53248	589 aa		6.07	□□□□□ -1.44
LSM6	YDR378C	RNT1	Q02555	471 aa		6.07	□□□□□ -1.44
LSM6	YDR378C	HMO1	Q03973	246 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	FRE5	Q08908	694 aa		6.07	□□□□□ -1.44
LSM6	YDR378C	HRP1	Q99383	534 aa	Known RBP	6.07	□□□□□ -1.44
LSM6	YDR378C	COX11	P19516	300 aa	Known RBP	6.06	□□□□□ -1.44
LSM6	YDR378C	YBR053C	P38235	358 aa		6.06	□□□□□ -1.44
LSM6	YDR378C	SUL1	P38359	859 aa		6.06	□□□□□ -1.44
LSM6	YDR378C	BAP3	P41815	604 aa		6.06	□□□□□ -1.44
LSM6	YDR378C	NOP9	P47077	666 aa	Known RBP	6.06	□□□□□ -1.44
LSM6	YDR378C	MTL1	P53214	551 aa		6.06	□□□□□ -1.44
LSM6	YDR378C	VBA4	Q04602	768 aa	Known RBP	6.06	□□□□□ -1.44
LSM6	YDR378C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	not detected
LSM6	YDR378C	ALG7	P07286	448 aa		6.05	□□□□□ -1.44
LSM6	YDR378C	SEC15	P22224	910 aa		6.05	□□□□□ -1.44
LSM6	YDR378C	ERG6	P25087	383 aa	Known RBP	6.05	□□□□□ -1.44
LSM6	YDR378C	DGR2	P32330	852 aa		6.05	□□□□□ -1.44
LSM6	YDR378C	VID28	P40547	921 aa		6.05	□□□□□ -1.44
LSM6	YDR378C	NOP2	P40991	618 aa	Known RBP	6.05	□□□□□ -1.44
LSM6	YDR378C	RSC8	P43609	557 aa	Known RBP	6.05	□□□□□ -1.44
LSM6	YDR378C	YJR008W	P47085	338 aa		6.05	□□□□□ -1.44
LSM6	YDR378C	SND1	Q04007	877 aa		6.05	□□□□□ -1.44
LSM6	YDR378C	YPS7	Q06325	596 aa		6.05	□□□□□ -1.44
LSM6	YDR378C	ECM3	Q99252	613 aa		6.05	□□□□□ -1.44
LSM6	YDR378C	PEX1	P24004	1043 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	PRP22	P24384	1145 aa	Known RBP	6.04	□□□□□ -1.44
LSM6	YDR378C	HEM12	P32347	362 aa	Predicted RBP	6.04	□□□□□ -1.44
LSM6	YDR378C	HIS7	P33734	552 aa	Known RBP	6.04	□□□□□ -1.44
LSM6	YDR378C	YKL222C	P35995	705 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	REV7	P38927	245 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	CCT3	P39077	534 aa	Known RBP	6.04	□□□□□ -1.44
LSM6	YDR378C	NUP60	P39705	539 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	HOS4	P40480	1083 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	PXA1	P41909	870 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	ENP2	P48234	707 aa	Known RBP	6.04	□□□□□ -1.44
LSM6	YDR378C	PHM6	Q05637	104 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	ADY4	Q05955	493 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	YLR040C	Q07988	224 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	TRM13	Q12383	476 aa		6.04	□□□□□ -1.44
LSM6	YDR378C	KIN82	P25341	720 aa		6.03	□□□□□ -1.44
LSM6	YDR378C	SER1	P33330	395 aa	Known RBP	6.03	□□□□□ -1.44
LSM6	YDR378C	LYS9	P38999	446 aa		6.03	□□□□□ -1.44
LSM6	YDR378C	YJL163C	P46996	555 aa		6.03	□□□□□ -1.44
LSM6	YDR378C	PPN1	Q04119	674 aa		6.03	□□□□□ -1.44
LSM6	YDR378C	VPS36	Q06696	566 aa		6.03	□□□□□ -1.44
LSM6	YDR378C	PEX15	Q08215	383 aa		6.03	□□□□□ -1.44
LSM6	YDR378C	SLX4	Q12098	748 aa		6.03	□□□□□ -1.44
LSM6	YDR378C	POM34	Q12445	299 aa		6.03	□□□□□ -1.44
LSM6	YDR378C	PPR1	P07272	904 aa	Predicted RBP	6.02	□□□□□ -1.45
LSM6	YDR378C	MVD1	P32377	396 aa	Known RBP	6.02	□□□□□ -1.45
LSM6	YDR378C	BCD1	P38772	366 aa		6.02	□□□□□ -1.45
LSM6	YDR378C	FMO1	P38866	432 aa		6.02	□□□□□ -1.45
LSM6	YDR378C	GET2	P40056	285 aa		6.02	□□□□□ -1.45
LSM6	YDR378C	IES1	P43579	692 aa		6.02	□□□□□ -1.45
LSM6	YDR378C	BIT61	P47041	543 aa		6.02	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms