RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	RCK2	P38623	610 aa		4.93	□□□□□ -1.62
APC4	YDR118W	HIS2	P38635	335 aa		4.93	□□□□□ -1.62
APC4	YDR118W	YHR054C	P38780	354 aa		4.93	□□□□□ -1.62
APC4	YDR118W	TVP23	P38962	199 aa		4.93	□□□□□ -1.62
APC4	YDR118W	SAH1	P39954	449 aa	Known RBP	4.93	□□□□□ -1.62
APC4	YDR118W	KAP123	P40069	1113 aa	Known RBP	4.93	□□□□□ -1.62
APC4	YDR118W	ISM1	P48526	1002 aa		4.93	□□□□□ -1.62
APC4	YDR118W	YGR111W	P53265	400 aa		4.93	□□□□□ -1.62
APC4	YDR118W	ALG12	P53730	551 aa		4.93	□□□□□ -1.62
APC4	YDR118W	NIS1	P53939	407 aa		4.93	□□□□□ -1.62
APC4	YDR118W	YLR455W	Q06188	304 aa		4.93	□□□□□ -1.62
APC4	YDR118W	ATG23	Q06671	453 aa		4.93	□□□□□ -1.62
APC4	YDR118W	PUS1	Q12211	544 aa	Known RBP	4.93	□□□□□ -1.62
APC4	YDR118W	RDS2	P19541	446 aa	Known RBP	4.92	□□□□□ -1.62
APC4	YDR118W	YJU3	P28321	313 aa		4.92	□□□□□ -1.62
APC4	YDR118W	GYP6	P32806	458 aa		4.92	□□□□□ -1.62
APC4	YDR118W	PPG1	P32838	368 aa		4.92	□□□□□ -1.62
APC4	YDR118W	BUD2	P33314	1104 aa		4.92	□□□□□ -1.62
APC4	YDR118W	NCL1	P38205	684 aa	Known RBP	4.92	□□□□□ -1.62
APC4	YDR118W	UBX7	P38349	436 aa		4.92	□□□□□ -1.62
APC4	YDR118W	YAP1801	P38856	637 aa		4.92	□□□□□ -1.62
APC4	YDR118W	SPC72	P39723	622 aa		4.92	□□□□□ -1.62
APC4	YDR118W	VAC8	P39968	578 aa		4.92	□□□□□ -1.62
APC4	YDR118W	YER186C	P40101	306 aa		4.92	□□□□□ -1.62
APC4	YDR118W	ZAP1	P47043	880 aa		4.92	□□□□□ -1.62
APC4	YDR118W	BRO1	P48582	844 aa		4.92	□□□□□ -1.62
APC4	YDR118W	GCV2	P49095	1034 aa		4.92	□□□□□ -1.62
APC4	YDR118W	SNU56	Q03782	492 aa	Known RBP	4.92	□□□□□ -1.62
APC4	YDR118W	YDR222W	Q04925	415 aa		4.92	□□□□□ -1.62
APC4	YDR118W	YDR524C-B	Q3E6R4	66 aa		4.92	□□□□□ -1.62
APC4	YDR118W	YER152C	P10356	443 aa		4.91	□□□□□ -1.62
APC4	YDR118W	VMA4	P22203	233 aa	Known RBP	4.91	□□□□□ -1.62
APC4	YDR118W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
APC4	YDR118W	RRP1	P35178	278 aa	Predicted RBP	4.91	□□□□□ -1.62
APC4	YDR118W	CBR1	P38626	284 aa	Known RBP	4.91	□□□□□ -1.62
APC4	YDR118W	MAD1	P40957	749 aa		4.91	□□□□□ -1.62
APC4	YDR118W	ALT2	P52892	507 aa		4.91	□□□□□ -1.62
APC4	YDR118W	ALT1	P52893	592 aa		4.91	□□□□□ -1.62
APC4	YDR118W	CDD1	Q06549	142 aa		4.91	□□□□□ -1.62
APC4	YDR118W	YPR027C	Q12079	277 aa		4.91	□□□□□ -1.62
APC4	YDR118W	LAA1	P39526	2014 aa		4.91	□□□□□ -1.62
APC4	YDR118W	YLR462W	O13556	202 aa		4.91	□□□□□ -1.62
APC4	YDR118W	FUB1	P25659	250 aa		4.91	□□□□□ -1.62
APC4	YDR118W	DBF4	P32325	704 aa		4.91	□□□□□ -1.62
APC4	YDR118W	EFB1	P32471	206 aa	Known RBP	4.91	□□□□□ -1.62
APC4	YDR118W	TBS1	P38114	1094 aa		4.91	□□□□□ -1.62
APC4	YDR118W	RRT2	P38332	387 aa		4.91	□□□□□ -1.62
APC4	YDR118W	YHL049C	P38722	271 aa		4.91	□□□□□ -1.62
APC4	YDR118W	TDA3	P38758	523 aa		4.91	□□□□□ -1.62
APC4	YDR118W	CCT4	P39078	528 aa	Known RBP	4.91	□□□□□ -1.62
APC4	YDR118W	YEL075C	P39972	122 aa		4.91	□□□□□ -1.62
APC4	YDR118W	YER189W	P40104	122 aa		4.91	□□□□□ -1.62
APC4	YDR118W	YFL064C	P43540	174 aa		4.91	□□□□□ -1.62
APC4	YDR118W	RPC17	P47076	161 aa		4.91	□□□□□ -1.62
APC4	YDR118W	HST2	P53686	357 aa		4.91	□□□□□ -1.62
APC4	YDR118W	GPD1	Q00055	391 aa	Known RBP	4.91	□□□□□ -1.62
APC4	YDR118W	URH1	Q04179	340 aa		4.91	□□□□□ -1.62
APC4	YDR118W	GYL1	Q04322	720 aa		4.91	□□□□□ -1.62
APC4	YDR118W	YDR278C	Q05612	105 aa		4.91	□□□□□ -1.62
APC4	YDR118W	DNL4	Q08387	944 aa	Predicted RBP	4.91	□□□□□ -1.62
APC4	YDR118W	YOR022C	Q12204	715 aa		4.91	□□□□□ -1.62
APC4	YDR118W	ZRT2	Q12436	422 aa		4.91	□□□□□ -1.62
APC4	YDR118W	CTF3	Q12748	733 aa		4.91	□□□□□ -1.62
APC4	YDR118W	YBL111C	Q3E7Y5	667 aa		4.91	□□□□□ -1.62
APC4	YDR118W	CHS1	P08004	1131 aa		4.9	□□□□□ -1.63
APC4	YDR118W	HEM1	P09950	548 aa	Predicted RBP	4.9	□□□□□ -1.63
APC4	YDR118W	RPO26	P20435	155 aa		4.9	□□□□□ -1.63
APC4	YDR118W	CNS1	P33313	385 aa		4.9	□□□□□ -1.63
APC4	YDR118W	HEL1	P36113	551 aa		4.9	□□□□□ -1.63
APC4	YDR118W	GRS1	P38088	690 aa	Known RBP	4.9	□□□□□ -1.63
APC4	YDR118W	AGP2	P38090	596 aa		4.9	□□□□□ -1.63
APC4	YDR118W	PPX1	P38698	397 aa		4.9	□□□□□ -1.63
APC4	YDR118W	YHL026C	P38740	315 aa		4.9	□□□□□ -1.63
APC4	YDR118W	LCP5	P40079	357 aa	Predicted RBP	4.9	□□□□□ -1.63
APC4	YDR118W	YJR054W	P47114	497 aa		4.9	□□□□□ -1.63
APC4	YDR118W	STB4	P50104	949 aa		4.9	□□□□□ -1.63
APC4	YDR118W	PUS2	P53167	370 aa		4.9	□□□□□ -1.63
APC4	YDR118W	YGL036W	P53185	909 aa	Predicted RBP	4.9	□□□□□ -1.63
APC4	YDR118W	YNL115C	P53925	644 aa		4.9	□□□□□ -1.63
APC4	YDR118W	ATG16	Q03818	150 aa		4.9	□□□□□ -1.63
APC4	YDR118W	VTI1	Q04338	217 aa		4.9	□□□□□ -1.63
APC4	YDR118W	ECI1	Q05871	280 aa		4.9	□□□□□ -1.63
APC4	YDR118W	SPO21	Q12411	609 aa		4.9	□□□□□ -1.63
APC4	YDR118W	RMP1	Q12530	201 aa		4.9	□□□□□ -1.63
APC4	YDR118W	BI2	P03873	423 aa		4.89	□□□□□ -1.63
APC4	YDR118W	BI4	P03879	638 aa		4.89	□□□□□ -1.63
APC4	YDR118W	RGR1	P19263	1082 aa		4.89	□□□□□ -1.63
APC4	YDR118W	RSA4	P25382	515 aa	Known RBP	4.89	□□□□□ -1.63
APC4	YDR118W	CSE2	P33308	149 aa		4.89	□□□□□ -1.63
APC4	YDR118W	GEM1	P39722	662 aa		4.89	□□□□□ -1.63
APC4	YDR118W	ASG1	P40467	964 aa		4.89	□□□□□ -1.63
APC4	YDR118W	HOP2	P53187	214 aa		4.89	□□□□□ -1.63
APC4	YDR118W	YGR130C	P53278	816 aa		4.89	□□□□□ -1.63
APC4	YDR118W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
APC4	YDR118W	EEB1	Q02891	456 aa		4.89	□□□□□ -1.63
APC4	YDR118W	MZM1	Q03429	123 aa	Predicted RBP	4.89	□□□□□ -1.63
APC4	YDR118W	ERV41	Q04651	352 aa		4.89	□□□□□ -1.63
APC4	YDR118W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
APC4	YDR118W	YOR059C	Q08448	450 aa	Known RBP	4.89	□□□□□ -1.63
APC4	YDR118W	BI3	Q9ZZW7	517 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms